RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 SLC25A24Q6NUK1 477 aa9.14□□□□□ -0.95
HDAC6-217ENST00000469223 GPHB5Q86YW7 130 aa9.14□□□□□ -0.95
HDAC6-217ENST00000469223 APRG1Q8IVJ8 170 aa9.14□□□□□ -0.95
HDAC6-217ENST00000469223 VKORC1L1Q8N0U8 176 aa9.14□□□□□ -0.95
HDAC6-217ENST00000469223 TMEM252Q8N6L7 170 aa9.14□□□□□ -0.95
HDAC6-217ENST00000469223 OR1S2Q8NGQ3 325 aa9.14□□□□□ -0.95
HDAC6-217ENST00000469223 OR1L8Q8NGR8 309 aa9.14□□□□□ -0.95
HDAC6-217ENST00000469223 NDUFAF3Q9BU61 184 aa9.14□□□□□ -0.95
HDAC6-217ENST00000469223 SCRT1Q9BWW7 348 aa9.14□□□□□ -0.95
HDAC6-217ENST00000469223 QTRT1Q9BXR0 403 aaKnown RBP9.14□□□□□ -0.95
HDAC6-217ENST00000469223 RGS13O14921 159 aa9.13□□□□□ -0.95
HDAC6-217ENST00000469223 OR2J3O76001 311 aa9.13□□□□□ -0.95
HDAC6-217ENST00000469223 IFNA5P01569 189 aa9.13□□□□□ -0.95
HDAC6-217ENST00000469223 IGHV3-23P01764 117 aa9.13□□□□□ -0.95
HDAC6-217ENST00000469223 IAPPP10997 89 aa9.13□□□□□ -0.95
HDAC6-217ENST00000469223 ARL3P36405 182 aa9.13□□□□□ -0.95
HDAC6-217ENST00000469223 SNCAP37840 140 aa9.13□□□□□ -0.95
HDAC6-217ENST00000469223 PRCDQ00LT1 54 aa9.13□□□□□ -0.95
HDAC6-217ENST00000469223 IZUMO4Q1ZYL8 232 aa9.13□□□□□ -0.95
HDAC6-217ENST00000469223 TEX261Q6UWH6 196 aa9.13□□□□□ -0.95
HDAC6-217ENST00000469223 LILRB2Q8N423 598 aa9.13□□□□□ -0.95
HDAC6-217ENST00000469223 OR10P1Q8NGE3 313 aa9.13□□□□□ -0.95
HDAC6-217ENST00000469223 STOML3Q8TAV4 291 aa9.13□□□□□ -0.95
HDAC6-217ENST00000469223 LRRC20Q8TCA0 184 aa9.13□□□□□ -0.95
HDAC6-217ENST00000469223 CHRDL1Q9BU40 450 aa9.13□□□□□ -0.95
HDAC6-217ENST00000469223 BOLA1Q9Y3E2 137 aa9.13□□□□□ -0.95
HDAC6-217ENST00000469223 RNF213Q63HN8 5207 aa9.12□□□□□ -0.95
HDAC6-217ENST00000469223 DEFB131BA0A096LNP1 70 aa9.12□□□□□ -0.95
HDAC6-217ENST00000469223 TRBV9A0A0B4J1U6 114 aa9.12□□□□□ -0.95
HDAC6-217ENST00000469223 IGHV4-28A0A0C4DH34 117 aa9.12□□□□□ -0.95
HDAC6-217ENST00000469223 FAM24AA6NFZ4 105 aa9.12□□□□□ -0.95
HDAC6-217ENST00000469223 CYB5BO43169 146 aa9.12□□□□□ -0.95
HDAC6-217ENST00000469223 CA1P00915 261 aaPredicted RBP9.12□□□□□ -0.95
HDAC6-217ENST00000469223 IL6RP08887 468 aaPredicted RBP9.12□□□□□ -0.95
HDAC6-217ENST00000469223 HTR2BP41595 481 aa9.12□□□□□ -0.95
HDAC6-217ENST00000469223 TNXAQ16473 311 aa9.12□□□□□ -0.95
HDAC6-217ENST00000469223 NDUFA5Q16718 116 aa9.12□□□□□ -0.95
HDAC6-217ENST00000469223 Q5VSD8 79 aa9.12□□□□□ -0.95
HDAC6-217ENST00000469223 SPATA12Q7Z6I5 190 aa9.12□□□□□ -0.95
HDAC6-217ENST00000469223 BAP18Q8IXM2 172 aa9.12□□□□□ -0.95
HDAC6-217ENST00000469223 SCGB1C1Q8TD33 95 aa9.12□□□□□ -0.95
HDAC6-217ENST00000469223 SRSF12Q8WXF0 261 aaKnown RBP9.12□□□□□ -0.95
HDAC6-217ENST00000469223 ST8SIA2Q92186 375 aa9.12□□□□□ -0.95
HDAC6-217ENST00000469223 SRSF8Q9BRL6 282 aaKnown RBP9.12□□□□□ -0.95
HDAC6-217ENST00000469223 HINT2Q9BX68 163 aa9.12□□□□□ -0.95
HDAC6-217ENST00000469223 INS-IGF2F8WCM5 200 aa9.11□□□□□ -0.95
HDAC6-217ENST00000469223 ADMP35318 185 aa9.11□□□□□ -0.95
HDAC6-217ENST00000469223 FAM106AQ4KMX7 169 aa9.11□□□□□ -0.95
HDAC6-217ENST00000469223 FAM209BQ5JX69 171 aa9.11□□□□□ -0.95
HDAC6-217ENST00000469223 UNQ9165/PRO28630Q6UXU0 137 aa9.11□□□□□ -0.95
HDAC6-217ENST00000469223 UBAC2Q8NBM4 344 aa9.11□□□□□ -0.95
HDAC6-217ENST00000469223 NECAP1Q8NC96 275 aa9.11□□□□□ -0.95
HDAC6-217ENST00000469223 SLC24A4Q8NFF2 622 aa9.11□□□□□ -0.95
HDAC6-217ENST00000469223 OR5C1Q8NGR4 320 aa9.11□□□□□ -0.95
HDAC6-217ENST00000469223 SCARB1Q8WTV0 552 aa9.11□□□□□ -0.95
HDAC6-217ENST00000469223 GNPNAT1Q96EK6 184 aaPredicted RBP9.11□□□□□ -0.95
HDAC6-217ENST00000469223 ATP5SQ99766 215 aa9.11□□□□□ -0.95
HDAC6-217ENST00000469223 GGACTQ9BVM4 153 aa9.11□□□□□ -0.95
HDAC6-217ENST00000469223 C11orf1Q9H5F2 150 aa9.11□□□□□ -0.95
HDAC6-217ENST00000469223 ZNF430Q9H8G1 570 aaPredicted RBP9.11□□□□□ -0.95
HDAC6-217ENST00000469223 S4R3C0 116 aa9.11□□□□□ -0.95
HDAC6-217ENST00000469223 H3BP45 60 aa9.1□□□□□ -0.95
HDAC6-217ENST00000469223 J3QL48 77 aa9.1□□□□□ -0.95
HDAC6-217ENST00000469223 TSPAN4O14817 238 aa9.1□□□□□ -0.95
HDAC6-217ENST00000469223 NPY1RP25929 384 aa9.1□□□□□ -0.95
HDAC6-217ENST00000469223 RPL27AP46776 148 aaKnown RBP9.1□□□□□ -0.95
HDAC6-217ENST00000469223 ZNF680Q8NEM1 530 aa9.1□□□□□ -0.95
HDAC6-217ENST00000469223 MARC2Q969Z3 335 aa9.1□□□□□ -0.95
HDAC6-217ENST00000469223 TEX50A0A1B0GTY4 177 aa9.09□□□□□ -0.95
HDAC6-217ENST00000469223 IGSF23A1L1A6 192 aa9.09□□□□□ -0.95
HDAC6-217ENST00000469223 OR4C46A6NHA9 309 aa9.09□□□□□ -0.95
HDAC6-217ENST00000469223 CORTO00230 105 aa9.09□□□□□ -0.95
HDAC6-217ENST00000469223 CST7O76096 145 aa9.09□□□□□ -0.95
HDAC6-217ENST00000469223 METTL15P1P0C7V9 234 aa9.09□□□□□ -0.95
HDAC6-217ENST00000469223 C8orf88P0DMB2 117 aa9.09□□□□□ -0.95
HDAC6-217ENST00000469223 PAX9P55771 341 aa9.09□□□□□ -0.95
HDAC6-217ENST00000469223 NHLH2Q02577 135 aa9.09□□□□□ -0.95
HDAC6-217ENST00000469223 SLC38A11Q08AI6 406 aa9.09□□□□□ -0.95
HDAC6-217ENST00000469223 TMEM14EPQ6UXP3 125 aa9.09□□□□□ -0.95
HDAC6-217ENST00000469223 CLEC19AQ6UXS0 136 aa9.09□□□□□ -0.95
HDAC6-217ENST00000469223 C19orf35Q6ZS72 473 aa9.09□□□□□ -0.95
HDAC6-217ENST00000469223 TTC9CQ8N5M4 171 aa9.09□□□□□ -0.95
HDAC6-217ENST00000469223 SMIM3Q9BZL3 60 aa9.09□□□□□ -0.95
HDAC6-217ENST00000469223 KCNIP2Q9NS61 270 aa9.09□□□□□ -0.95
HDAC6-217ENST00000469223 CELA1Q9UNI1 258 aa9.09□□□□□ -0.95
HDAC6-217ENST00000469223 TRAV3A0A0B4J244 114 aa9.08□□□□□ -0.96
HDAC6-217ENST00000469223 C17orf112F2Z3M2 114 aa9.08□□□□□ -0.96
HDAC6-217ENST00000469223 RAB5CP51148 216 aa9.08□□□□□ -0.96
HDAC6-217ENST00000469223 RAB31Q13636 194 aa9.08□□□□□ -0.96
HDAC6-217ENST00000469223 CLINT1Q14677 625 aa9.08□□□□□ -0.96
HDAC6-217ENST00000469223 OR8G2PQ6IF36 304 aa9.08□□□□□ -0.96
HDAC6-217ENST00000469223 ETFRF1Q6IPR1 90 aa9.08□□□□□ -0.96
HDAC6-217ENST00000469223 RNF141Q8WVD5 230 aa9.08□□□□□ -0.96
HDAC6-217ENST00000469223 TMEM147Q9BVK8 224 aa9.08□□□□□ -0.96
HDAC6-217ENST00000469223 PARD6GQ9BYG4 376 aaPredicted RBP9.08□□□□□ -0.96
HDAC6-217ENST00000469223 SLC25A32Q9H2D1 315 aa9.08□□□□□ -0.96
HDAC6-217ENST00000469223 NDUFA4L2Q9NRX3 87 aa9.08□□□□□ -0.96
HDAC6-217ENST00000469223 UQCC1Q9NVA1 299 aa9.08□□□□□ -0.96
HDAC6-217ENST00000469223 MRPL27Q9P0M9 148 aaKnown RBP9.08□□□□□ -0.96
HDAC6-217ENST00000469223 ELOA3CA0A087WX78 387 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms