RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 RPL23P62829 140 aaKnown RBP7.44□□□□□ -1.22
APOBEC1-202ENST00000467171 RHOGP84095 191 aa7.44□□□□□ -1.22
APOBEC1-202ENST00000467171 ZNF674Q2M3X9 581 aa7.44□□□□□ -1.22
APOBEC1-202ENST00000467171 DEFB112Q30KQ8 113 aa7.44□□□□□ -1.22
APOBEC1-202ENST00000467171 Q56UQ5 140 aa7.44□□□□□ -1.22
APOBEC1-202ENST00000467171 FAM223AQ8IWN6 122 aa7.44□□□□□ -1.22
APOBEC1-202ENST00000467171 RNF125Q96EQ8 232 aa7.44□□□□□ -1.22
APOBEC1-202ENST00000467171 FOXC2Q99958 501 aa7.44□□□□□ -1.22
APOBEC1-202ENST00000467171 SLC25A39Q9BZJ4 359 aaPredicted RBP7.44□□□□□ -1.22
APOBEC1-202ENST00000467171 LY96Q9Y6Y9 160 aa7.44□□□□□ -1.22
APOBEC1-202ENST00000467171 POLQO75417 2590 aa7.44□□□□□ -1.22
APOBEC1-202ENST00000467171 CREBBPQ92793 2442 aa7.43□□□□□ -1.22
APOBEC1-202ENST00000467171 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.43□□□□□ -1.22
APOBEC1-202ENST00000467171 TRBV7-1A0A0A6YYK4 115 aa7.43□□□□□ -1.22
APOBEC1-202ENST00000467171 SH2D7A6NKC9 451 aaPredicted RBP7.43□□□□□ -1.22
APOBEC1-202ENST00000467171 GGTLC3B5MD39 225 aa7.43□□□□□ -1.22
APOBEC1-202ENST00000467171 G3V318 75 aa7.43□□□□□ -1.22
APOBEC1-202ENST00000467171 H3BRN7 92 aa7.43□□□□□ -1.22
APOBEC1-202ENST00000467171 AP4M1O00189 453 aa7.43□□□□□ -1.22
APOBEC1-202ENST00000467171 MT-ND4LP03901 98 aa7.43□□□□□ -1.22
APOBEC1-202ENST00000467171 OR10J4P0C629 311 aa7.43□□□□□ -1.22
APOBEC1-202ENST00000467171 CD99P14209 185 aa7.43□□□□□ -1.22
APOBEC1-202ENST00000467171 GP9P14770 177 aa7.43□□□□□ -1.22
APOBEC1-202ENST00000467171 PPIFP30405 207 aaKnown RBP7.43□□□□□ -1.22
APOBEC1-202ENST00000467171 MYCNOSP40205 109 aa7.43□□□□□ -1.22
APOBEC1-202ENST00000467171 AKR1C3P42330 323 aa7.43□□□□□ -1.22
APOBEC1-202ENST00000467171 IER3P46695 156 aa7.43□□□□□ -1.22
APOBEC1-202ENST00000467171 KIAA0141Q14154 515 aaPredicted RBP7.43□□□□□ -1.22
APOBEC1-202ENST00000467171 LY6EQ16553 131 aa7.43□□□□□ -1.22
APOBEC1-202ENST00000467171 C15orf32Q32M92 178 aa7.43□□□□□ -1.22
APOBEC1-202ENST00000467171 MAPK1IP1LQ8NDC0 245 aa7.43□□□□□ -1.22
APOBEC1-202ENST00000467171 EEF1AKMT3Q96AZ1 226 aa7.43□□□□□ -1.22
APOBEC1-202ENST00000467171 YPEL4Q96NS1 127 aa7.43□□□□□ -1.22
APOBEC1-202ENST00000467171 TMA7Q9Y2S6 64 aaKnown RBP7.43□□□□□ -1.22
APOBEC1-202ENST00000467171 ABCA12Q86UK0 2595 aa7.42□□□□□ -1.22
APOBEC1-202ENST00000467171 ABCA1O95477 2261 aa7.42□□□□□ -1.22
APOBEC1-202ENST00000467171 IL4P05112 153 aa7.42□□□□□ -1.22
APOBEC1-202ENST00000467171 NBEAP1P0C6P0 100 aa7.42□□□□□ -1.22
APOBEC1-202ENST00000467171 PYYP10082 97 aa7.42□□□□□ -1.22
APOBEC1-202ENST00000467171 HIST1H1EP10412 219 aaKnown RBP7.42□□□□□ -1.22
APOBEC1-202ENST00000467171 FOLR2P14207 255 aa7.42□□□□□ -1.22
APOBEC1-202ENST00000467171 ADMP35318 185 aa7.42□□□□□ -1.22
APOBEC1-202ENST00000467171 SUMO1P63165 101 aaKnown RBP7.42□□□□□ -1.22
APOBEC1-202ENST00000467171 ATP5G2Q06055 141 aa7.42□□□□□ -1.22
APOBEC1-202ENST00000467171 ADIRFQ15847 76 aa7.42□□□□□ -1.22
APOBEC1-202ENST00000467171 RNF212Q495C1 297 aa7.42□□□□□ -1.22
APOBEC1-202ENST00000467171 Q6YL49 198 aa7.42□□□□□ -1.22
APOBEC1-202ENST00000467171 ZNF600Q6ZNG1 722 aa7.42□□□□□ -1.22
APOBEC1-202ENST00000467171 LINC01551Q86U37 167 aa7.42□□□□□ -1.22
APOBEC1-202ENST00000467171 BCL6BQ8N143 479 aaPredicted RBP7.42□□□□□ -1.22
APOBEC1-202ENST00000467171 C2CD4CQ8TF44 421 aa7.42□□□□□ -1.22
APOBEC1-202ENST00000467171 HIST1H2BAQ96A08 127 aa7.42□□□□□ -1.22
APOBEC1-202ENST00000467171 USMG5Q96IX5 58 aa7.42□□□□□ -1.22
APOBEC1-202ENST00000467171 ELOVL1Q9BW60 279 aa7.42□□□□□ -1.22
APOBEC1-202ENST00000467171 TACC2O95359 2948 aa7.41□□□□□ -1.22
APOBEC1-202ENST00000467171 MDFIC2A0A1B0GVS7 189 aa7.41□□□□□ -1.22
APOBEC1-202ENST00000467171 TMEM89A2RUT3 159 aa7.41□□□□□ -1.22
APOBEC1-202ENST00000467171 CLDN34H7C241 214 aa7.41□□□□□ -1.22
APOBEC1-202ENST00000467171 MRPS12O15235 138 aaKnown RBP7.41□□□□□ -1.22
APOBEC1-202ENST00000467171 CLEC3BP05452 202 aa7.41□□□□□ -1.22
APOBEC1-202ENST00000467171 CRYBB3P26998 211 aa7.41□□□□□ -1.22
APOBEC1-202ENST00000467171 TAS2R60P59551 318 aa7.41□□□□□ -1.22
APOBEC1-202ENST00000467171 CFHR3Q02985 330 aa7.41□□□□□ -1.22
APOBEC1-202ENST00000467171 USF2Q15853 346 aaPredicted RBP7.41□□□□□ -1.22
APOBEC1-202ENST00000467171 ZNF329Q86UD4 541 aa7.41□□□□□ -1.22
APOBEC1-202ENST00000467171 BPIFA4PQ86YQ2 179 aa7.41□□□□□ -1.22
APOBEC1-202ENST00000467171 ISOC2Q96AB3 205 aa7.41□□□□□ -1.22
APOBEC1-202ENST00000467171 ANAPC16Q96DE5 110 aa7.41□□□□□ -1.22
APOBEC1-202ENST00000467171 CCDC140Q96MF4 163 aa7.41□□□□□ -1.22
APOBEC1-202ENST00000467171 CHRDL1Q9BU40 450 aa7.41□□□□□ -1.22
APOBEC1-202ENST00000467171 DERL1Q9BUN8 251 aa7.41□□□□□ -1.22
APOBEC1-202ENST00000467171 TRBV20OR9-2A0A075B6H5 130 aa7.4□□□□□ -1.22
APOBEC1-202ENST00000467171 HELTA6NFD8 242 aa7.4□□□□□ -1.22
APOBEC1-202ENST00000467171 OR2T8A6NH00 312 aa7.4□□□□□ -1.22
APOBEC1-202ENST00000467171 ZNF98A6NK75 572 aa7.4□□□□□ -1.22
APOBEC1-202ENST00000467171 PPP1R2P9O14990 202 aa7.4□□□□□ -1.22
APOBEC1-202ENST00000467171 TGOLN2O43493 480 aa7.4□□□□□ -1.22
APOBEC1-202ENST00000467171 IGHV4-59P01825 116 aa7.4□□□□□ -1.22
APOBEC1-202ENST00000467171 IGLC2P0DOY2 106 aa7.4□□□□□ -1.22
APOBEC1-202ENST00000467171 RPL35P42766 123 aaKnown RBP7.4□□□□□ -1.22
APOBEC1-202ENST00000467171 RAB9AP51151 201 aa7.4□□□□□ -1.22
APOBEC1-202ENST00000467171 BLCAPP62952 87 aa7.4□□□□□ -1.22
APOBEC1-202ENST00000467171 C9orf152Q5JTZ5 239 aa7.4□□□□□ -1.22
APOBEC1-202ENST00000467171 HIST2H2BCQ6DN03 193 aa7.4□□□□□ -1.22
APOBEC1-202ENST00000467171 LYPD1Q8N2G4 141 aa7.4□□□□□ -1.22
APOBEC1-202ENST00000467171 WFDC11Q8NEX6 87 aa7.4□□□□□ -1.22
APOBEC1-202ENST00000467171 OR4F17Q8NGA8 305 aa7.4□□□□□ -1.22
APOBEC1-202ENST00000467171 ZNF414Q96IQ9 312 aa7.4□□□□□ -1.22
APOBEC1-202ENST00000467171 KRTAP9-9Q9BYP9 154 aa7.4□□□□□ -1.22
APOBEC1-202ENST00000467171 KRTAP9-4Q9BYQ2 154 aa7.4□□□□□ -1.22
APOBEC1-202ENST00000467171 OTORQ9NRC9 128 aa7.4□□□□□ -1.22
APOBEC1-202ENST00000467171 CDC42EP3Q9UKI2 254 aa7.4□□□□□ -1.22
APOBEC1-202ENST00000467171 VPREB3Q9UKI3 123 aa7.4□□□□□ -1.22
APOBEC1-202ENST00000467171 S4R3C0 116 aa7.4□□□□□ -1.22
APOBEC1-202ENST00000467171 ANKRD17O75179 2603 aaKnown RBP7.4□□□□□ -1.23
APOBEC1-202ENST00000467171 HELZ2Q9BYK8 2649 aaKnown RBP7.4□□□□□ -1.23
APOBEC1-202ENST00000467171 PRRC2AP48634 2157 aaKnown RBP7.39□□□□□ -1.23
APOBEC1-202ENST00000467171 H7BYZ3 331 aa7.39□□□□□ -1.23
APOBEC1-202ENST00000467171 BMPR1BO00238 502 aa7.39□□□□□ -1.23
APOBEC1-202ENST00000467171 PEX7O00628 323 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms