RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 TMEM186Q96B77 213 aa5.84□□□□□ -1.47
USP48-206ENST00000464577 GAGE10A6NGK3 116 aa5.83□□□□□ -1.48
USP48-206ENST00000464577 C9orf118A6NHY6 69 aa5.83□□□□□ -1.48
USP48-206ENST00000464577 M0R1B8 84 aa5.83□□□□□ -1.48
USP48-206ENST00000464577 IGLV2-11P01706 119 aa5.83□□□□□ -1.48
USP48-206ENST00000464577 CEACAM3P40198 252 aa5.83□□□□□ -1.48
USP48-206ENST00000464577 ATP1A1-AS1Q5TC04 95 aa5.83□□□□□ -1.48
USP48-206ENST00000464577 FA2HQ7L5A8 372 aa5.83□□□□□ -1.48
USP48-206ENST00000464577 RPRMLQ8N4K4 120 aa5.83□□□□□ -1.48
USP48-206ENST00000464577 TEX45Q8NA69 505 aa5.83□□□□□ -1.48
USP48-206ENST00000464577 RAI1Q7Z5J4 1906 aaPredicted RBP5.83□□□□□ -1.48
USP48-206ENST00000464577 K7EP34 96 aa5.83□□□□□ -1.48
USP48-206ENST00000464577 SIVA1O15304 175 aa5.83□□□□□ -1.48
USP48-206ENST00000464577 IGHV3-48P01763 117 aa5.83□□□□□ -1.48
USP48-206ENST00000464577 ZNF138P52744 262 aa5.83□□□□□ -1.48
USP48-206ENST00000464577 HSD52Q0P140 79 aa5.83□□□□□ -1.48
USP48-206ENST00000464577 MRGPRG-AS1Q2M3A8 158 aa5.83□□□□□ -1.48
USP48-206ENST00000464577 LGALS9BQ3B8N2 356 aa5.83□□□□□ -1.48
USP48-206ENST00000464577 LGALS9CQ6DKI2 356 aa5.83□□□□□ -1.48
USP48-206ENST00000464577 FER1L6-AS1Q8NA97 138 aa5.83□□□□□ -1.48
USP48-206ENST00000464577 DEFB108BQ8NET1 73 aa5.83□□□□□ -1.48
USP48-206ENST00000464577 OR9G4Q8NGQ1 327 aa5.83□□□□□ -1.48
USP48-206ENST00000464577 MEGF9Q9H1U4 602 aa5.83□□□□□ -1.48
USP48-206ENST00000464577 HIGD1AQ9Y241 93 aa5.83□□□□□ -1.48
USP48-206ENST00000464577 MED13Q9UHV7 2174 aa5.82□□□□□ -1.48
USP48-206ENST00000464577 MBD3L4A6NDZ8 208 aaPredicted RBP5.82□□□□□ -1.48
USP48-206ENST00000464577 MBD3L3A6NE82 208 aaPredicted RBP5.82□□□□□ -1.48
USP48-206ENST00000464577 MBD3L5A6NJ08 208 aaPredicted RBP5.82□□□□□ -1.48
USP48-206ENST00000464577 APOBEC3AP31941 199 aaPredicted RBP5.82□□□□□ -1.48
USP48-206ENST00000464577 LGALS7P47929 136 aa5.82□□□□□ -1.48
USP48-206ENST00000464577 ZNF493Q6ZR52 646 aa5.82□□□□□ -1.48
USP48-206ENST00000464577 BOD1L2Q8IYS8 172 aa5.82□□□□□ -1.48
USP48-206ENST00000464577 CIARTQ8N365 385 aaPredicted RBP5.82□□□□□ -1.48
USP48-206ENST00000464577 TMEM75Q8N9X5 138 aa5.82□□□□□ -1.48
USP48-206ENST00000464577 MBD3L2Q8NHZ7 208 aaPredicted RBP5.82□□□□□ -1.48
USP48-206ENST00000464577 MCRIP2Q9BUT9 160 aaKnown RBP5.82□□□□□ -1.48
USP48-206ENST00000464577 CACNA1GO43497 2377 aa5.82□□□□□ -1.48
USP48-206ENST00000464577 DSCAMO60469 2012 aa5.82□□□□□ -1.48
USP48-206ENST00000464577 DYSFO75923 2080 aa5.82□□□□□ -1.48
USP48-206ENST00000464577 EYSQ5T1H1 3165 aa5.82□□□□□ -1.48
USP48-206ENST00000464577 TRAV17A0A0B4J275 112 aa5.81□□□□□ -1.48
USP48-206ENST00000464577 ZNF785A8K8V0 405 aa5.81□□□□□ -1.48
USP48-206ENST00000464577 PPIAL4DF5H284 164 aa5.81□□□□□ -1.48
USP48-206ENST00000464577 H0Y8G0 127 aa5.81□□□□□ -1.48
USP48-206ENST00000464577 NCR2O95944 276 aa5.81□□□□□ -1.48
USP48-206ENST00000464577 CSN3P07498 182 aa5.81□□□□□ -1.48
USP48-206ENST00000464577 ARMS2P0C7Q2 107 aa5.81□□□□□ -1.48
USP48-206ENST00000464577 MC5RP33032 325 aa5.81□□□□□ -1.48
USP48-206ENST00000464577 VHLLQ6RSH7 139 aa5.81□□□□□ -1.48
USP48-206ENST00000464577 IGFL2Q6UWQ7 119 aa5.81□□□□□ -1.48
USP48-206ENST00000464577 PRNTQ86SH4 94 aa5.81□□□□□ -1.48
USP48-206ENST00000464577 C1orf210Q8IVY1 113 aa5.81□□□□□ -1.48
USP48-206ENST00000464577 OR4X2Q8NGF9 303 aa5.81□□□□□ -1.48
USP48-206ENST00000464577 PRSS3P2Q8NHM4 247 aa5.81□□□□□ -1.48
USP48-206ENST00000464577 AP1S3Q96PC3 154 aa5.81□□□□□ -1.48
USP48-206ENST00000464577 JMJD8Q96S16 334 aa5.81□□□□□ -1.48
USP48-206ENST00000464577 U3KQK5 164 aa5.81□□□□□ -1.48
USP48-206ENST00000464577 CFAP54Q96N23 3096 aa5.81□□□□□ -1.48
USP48-206ENST00000464577 A0A096LNJ9 63 aa5.81□□□□□ -1.48
USP48-206ENST00000464577 G3V4G9 280 aa5.81□□□□□ -1.48
USP48-206ENST00000464577 SMAD7O15105 426 aaKnown RBP5.81□□□□□ -1.48
USP48-206ENST00000464577 SLC25A17O43808 307 aa5.81□□□□□ -1.48
USP48-206ENST00000464577 CCL3L1P16619 93 aa5.81□□□□□ -1.48
USP48-206ENST00000464577 FOXE3Q13461 319 aa5.81□□□□□ -1.48
USP48-206ENST00000464577 RUSC1-AS1Q66K80 236 aa5.81□□□□□ -1.48
USP48-206ENST00000464577 GOLT1AQ6ZVE7 132 aa5.81□□□□□ -1.48
USP48-206ENST00000464577 OR5A1Q8NGJ0 315 aa5.81□□□□□ -1.48
USP48-206ENST00000464577 SRSF12Q8WXF0 261 aaKnown RBP5.81□□□□□ -1.48
USP48-206ENST00000464577 RABAC1Q9UI14 185 aa5.81□□□□□ -1.48
USP48-206ENST00000464577 PRR14LQ5THK1 2151 aa5.81□□□□□ -1.48
USP48-206ENST00000464577 TNCP24821 2201 aa5.81□□□□□ -1.48
USP48-206ENST00000464577 TRAV8-1A0A0A6YYK1 113 aa5.8□□□□□ -1.48
USP48-206ENST00000464577 A1L4Q6 167 aa5.8□□□□□ -1.48
USP48-206ENST00000464577 TMEM238C9JI98 176 aa5.8□□□□□ -1.48
USP48-206ENST00000464577 SAP30O75446 220 aa5.8□□□□□ -1.48
USP48-206ENST00000464577 CD59P13987 128 aa5.8□□□□□ -1.48
USP48-206ENST00000464577 RPL27AP46776 148 aaKnown RBP5.8□□□□□ -1.48
USP48-206ENST00000464577 LPAL2Q16609 132 aa5.8□□□□□ -1.48
USP48-206ENST00000464577 PSMG4Q5JS54 123 aa5.8□□□□□ -1.48
USP48-206ENST00000464577 TMEM200BQ69YZ2 307 aa5.8□□□□□ -1.48
USP48-206ENST00000464577 SEM1Q6ZVN7 128 aa5.8□□□□□ -1.48
USP48-206ENST00000464577 NEGR1Q7Z3B1 354 aa5.8□□□□□ -1.48
USP48-206ENST00000464577 LYPD1Q8N2G4 141 aa5.8□□□□□ -1.48
USP48-206ENST00000464577 ZADH2Q8N4Q0 377 aa5.8□□□□□ -1.48
USP48-206ENST00000464577 ZC2HC1AQ96GY0 325 aa5.8□□□□□ -1.48
USP48-206ENST00000464577 COL25A1Q9BXS0 654 aaPredicted RBP5.8□□□□□ -1.48
USP48-206ENST00000464577 SLC25A39Q9BZJ4 359 aaPredicted RBP5.8□□□□□ -1.48
USP48-206ENST00000464577 NPFFR1Q9GZQ6 430 aa5.8□□□□□ -1.48
USP48-206ENST00000464577 TPSG1Q9NRR2 321 aa5.8□□□□□ -1.48
USP48-206ENST00000464577 A0A0G2JLM5 398 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 H3BTX0 84 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 K7EQM0 130 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 THBDP07204 575 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 CRYGBP07316 175 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 SMIM17P0DL12 118 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 TNFRSF1AP19438 455 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 KIR3DS1Q14943 382 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 HCP5Q6MZN7 132 aa5.79□□□□□ -1.48
USP48-206ENST00000464577 ZNF474Q6S9Z5 364 aaPredicted RBP5.79□□□□□ -1.48
USP48-206ENST00000464577 ADAMTSL5Q6ZMM2 481 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms