RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 SEC11AP67812 179 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 RHOGP84095 191 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 RBPJQ06330 500 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 FAM27E3Q08E93 113 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 SRSF6Q13247 344 aaKnown RBP2.81□□□□□ -1.96
COL8A1-204ENST00000462604 PLGLAQ15195 96 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 RNF151Q2KHN1 245 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 TMEM155Q4W5P6 130 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 MPV17L2Q567V2 206 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 MUC21Q5SSG8 566 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 LINC01545Q5VT33 79 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 IGFL3Q6UXB1 125 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 LINC00322Q6ZN03 302 aaPredicted RBP2.81□□□□□ -1.96
COL8A1-204ENST00000462604 LINC00173Q6ZV60 143 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 SMIM15Q7Z3B0 74 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 PIP4P1Q86T03 277 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 LYPD1Q8N2G4 141 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 CIARTQ8N365 385 aaPredicted RBP2.81□□□□□ -1.96
COL8A1-204ENST00000462604 RPRMLQ8N4K4 120 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 DEFB125Q8N687 156 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 KIR3DL3Q8N743 410 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 GATD1Q8NB37 220 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 DEFB124Q8NES8 71 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 PRSS3P2Q8NHM4 247 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 FAM57AQ8TBR7 257 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 RNASE8Q8TDE3 154 aaKnown RBP2.81□□□□□ -1.96
COL8A1-204ENST00000462604 GTSF1Q8WW33 167 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 SRSF12Q8WXF0 261 aaKnown RBP2.81□□□□□ -1.96
COL8A1-204ENST00000462604 CCL17Q92583 94 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 DPF1Q92782 380 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 ABHD17AQ96GS6 310 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 URB1-AS1Q96HZ7 61 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 SGK494Q96LW2 274 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 AP1S3Q96PC3 154 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 ATP6V0BQ99437 205 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 SHANK2-AS3Q9BTD1 123 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 TPPP3Q9BW30 176 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 SLC25A39Q9BZJ4 359 aaPredicted RBP2.81□□□□□ -1.96
COL8A1-204ENST00000462604 RAB1BQ9H0U4 201 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 CDIP1Q9H305 208 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 NGBQ9NPG2 151 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 TPSG1Q9NRR2 321 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 AP5S1Q9NUS5 200 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 MRPL36Q9P0J6 103 aaKnown RBP2.81□□□□□ -1.96
COL8A1-204ENST00000462604 PEF1Q9UBV8 284 aaKnown RBP2.81□□□□□ -1.96
COL8A1-204ENST00000462604 SIGLEC9Q9Y336 463 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 ABCA7Q8IZY2 2146 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 REV3LO60673 3130 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 MED12Q93074 2177 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 RALGAPA1Q6GYQ0 2036 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 LOC105371242A0A075B767 164 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 IGHV3-72A0A0B4J1Y9 119 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 SPAARA0A1B0GVQ0 90 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 OR2T8A6NH00 312 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 FBLL1A6NHQ2 334 aaKnown RBP2.8□□□□□ -1.96
COL8A1-204ENST00000462604 VWC2LB2RUY7 222 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 H3BRN7 92 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 K7ERU9 68 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 PRRG2O14669 202 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 CNIH1O95406 144 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 TNFRSF6BO95407 300 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 CRYGBP07316 175 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 CSN3P07498 182 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 ARMS2P0C7Q2 107 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 IGLC1P0CG04 106 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 PSG1P11464 419 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 WT1P19544 449 aaPredicted RBP2.8□□□□□ -1.96
COL8A1-204ENST00000462604 S100A7P31151 101 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 DLX6P56179 175 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 PSG9Q00887 426 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 NHLH1Q02575 133 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 BSPH1Q075Z2 132 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 HSD52Q0P140 79 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 PDE6HQ13956 83 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 DIAPH2-AS1Q14236 149 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 PSG3Q16557 428 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 PSMG4Q5JS54 123 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 PRR31Q5SQ13 230 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 LYPD2Q6UXB3 125 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 Q6ZS92 163 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 Q6ZVH6 145 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 GTF2H5Q6ZYL4 71 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 PPP1R27Q86WC6 154 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 DEFB123Q8N688 67 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 OR9G4Q8NGQ1 327 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 OR1N2Q8NGR9 330 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 RPEQ96AT9 228 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 RNF5Q99942 180 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 VPS25Q9BRG1 176 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 ZNF747Q9BV97 191 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 AAMDCQ9H7C9 122 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 PGPEP1Q9NXJ5 209 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 KAAG1Q9UBP8 84 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 CTSZQ9UBR2 303 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 PSG8Q9UQ74 426 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 TIMM8BQ9Y5J9 83 aaPredicted RBP2.8□□□□□ -1.96
COL8A1-204ENST00000462604 INSIG2Q9Y5U4 225 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 KNL1Q8NG31 2342 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 RP1P56715 2156 aa2.8□□□□□ -1.96
COL8A1-204ENST00000462604 KIAA1549Q9HCM3 1950 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms