RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 FGF16O43320 207 aa7.44□□□□□ -1.22
SHROOM4-203ENST00000460112 SSBP2P81877 361 aaPredicted RBP7.44□□□□□ -1.22
SHROOM4-203ENST00000460112 OCIAD2Q56VL3 154 aa7.44□□□□□ -1.22
SHROOM4-203ENST00000460112 TMEM144Q7Z5S9 345 aa7.44□□□□□ -1.22
SHROOM4-203ENST00000460112 HIST1H2BLQ99880 126 aa7.44□□□□□ -1.22
SHROOM4-203ENST00000460112 SAA2-SAA4A0A096LPE2 208 aa7.44□□□□□ -1.22
SHROOM4-203ENST00000460112 H3BMM0 161 aa7.44□□□□□ -1.22
SHROOM4-203ENST00000460112 SAA2P0DJI9 122 aaPredicted RBP7.44□□□□□ -1.22
SHROOM4-203ENST00000460112 LINC01590Q5TEZ4 76 aa7.44□□□□□ -1.22
SHROOM4-203ENST00000460112 TRBV7-1A0A0A6YYK4 115 aa7.44□□□□□ -1.22
SHROOM4-203ENST00000460112 HSD52Q0P140 79 aa7.44□□□□□ -1.22
SHROOM4-203ENST00000460112 COQ2Q96H96 371 aa7.44□□□□□ -1.22
SHROOM4-203ENST00000460112 ATP6V0BQ99437 205 aa7.44□□□□□ -1.22
SHROOM4-203ENST00000460112 MSGN1A6NI15 193 aa7.43□□□□□ -1.22
SHROOM4-203ENST00000460112 CHAC1Q9BUX1 264 aa7.43□□□□□ -1.22
SHROOM4-203ENST00000460112 LOC101059948A0A1B0GTJ6 334 aa7.43□□□□□ -1.22
SHROOM4-203ENST00000460112 RPL36AP83881 106 aaKnown RBP7.43□□□□□ -1.22
SHROOM4-203ENST00000460112 RPL36ALQ969Q0 106 aaKnown RBP7.43□□□□□ -1.22
SHROOM4-203ENST00000460112 ST6GALNAC6Q969X2 333 aa7.43□□□□□ -1.22
SHROOM4-203ENST00000460112 SAP30O75446 220 aa7.43□□□□□ -1.22
SHROOM4-203ENST00000460112 UMODP07911 640 aa7.43□□□□□ -1.22
SHROOM4-203ENST00000460112 CD33P20138 364 aa7.43□□□□□ -1.22
SHROOM4-203ENST00000460112 CCL1P22362 96 aa7.43□□□□□ -1.22
SHROOM4-203ENST00000460112 TEX43Q6ZNM6 134 aa7.43□□□□□ -1.22
SHROOM4-203ENST00000460112 NHP2Q9NX24 153 aaKnown RBP7.43□□□□□ -1.22
SHROOM4-203ENST00000460112 ERCC8Q13216 396 aa7.43□□□□□ -1.22
SHROOM4-203ENST00000460112 PPP1R32Q7Z5V6 425 aa7.43□□□□□ -1.22
SHROOM4-203ENST00000460112 FOXA3P55318 350 aaPredicted RBP7.43□□□□□ -1.22
SHROOM4-203ENST00000460112 SCO2A0A1W2PP80 73 aa7.43□□□□□ -1.22
SHROOM4-203ENST00000460112 CD160O95971 181 aa7.43□□□□□ -1.22
SHROOM4-203ENST00000460112 PRCDQ00LT1 54 aa7.43□□□□□ -1.22
SHROOM4-203ENST00000460112 RMI2Q96E14 147 aa7.43□□□□□ -1.22
SHROOM4-203ENST00000460112 ERG28Q9UKR5 140 aa7.43□□□□□ -1.22
SHROOM4-203ENST00000460112 IGHV3OR16-13A0A075B7E8 117 aa7.43□□□□□ -1.22
SHROOM4-203ENST00000460112 IGHV3-74A0A0B4J1X5 117 aa7.43□□□□□ -1.22
SHROOM4-203ENST00000460112 FAM223BA6NKX1 122 aa7.43□□□□□ -1.22
SHROOM4-203ENST00000460112 SRP19P09132 144 aaKnown RBP7.43□□□□□ -1.22
SHROOM4-203ENST00000460112 FAM223AQ8IWN6 122 aa7.43□□□□□ -1.22
SHROOM4-203ENST00000460112 RNF5Q99942 180 aa7.43□□□□□ -1.22
SHROOM4-203ENST00000460112 CHCHD2Q9Y6H1 151 aaPredicted RBP7.43□□□□□ -1.22
SHROOM4-203ENST00000460112 VKORC1Q9BQB6 163 aa7.42□□□□□ -1.22
SHROOM4-203ENST00000460112 COLQQ9Y215 455 aaPredicted RBP7.42□□□□□ -1.22
SHROOM4-203ENST00000460112 PMVKQ15126 192 aa7.42□□□□□ -1.22
SHROOM4-203ENST00000460112 SS18Q15532 418 aa7.42□□□□□ -1.22
SHROOM4-203ENST00000460112 C9orf153Q5TBE3 101 aa7.42□□□□□ -1.22
SHROOM4-203ENST00000460112 TRAV41A0A0B4J266 112 aa7.42□□□□□ -1.22
SHROOM4-203ENST00000460112 TNFSF13O75888 250 aa7.42□□□□□ -1.22
SHROOM4-203ENST00000460112 MINOS1Q5TGZ0 78 aa7.42□□□□□ -1.22
SHROOM4-203ENST00000460112 HEPN1Q6WQI6 88 aa7.42□□□□□ -1.22
SHROOM4-203ENST00000460112 DLX4Q92988 240 aaPredicted RBP7.42□□□□□ -1.22
SHROOM4-203ENST00000460112 USMG5Q96IX5 58 aa7.42□□□□□ -1.22
SHROOM4-203ENST00000460112 MRPL27Q9P0M9 148 aaKnown RBP7.42□□□□□ -1.22
SHROOM4-203ENST00000460112 MINOS1-NBL1R4GNA1 71 aa7.42□□□□□ -1.22
SHROOM4-203ENST00000460112 TRAV2A0A0B4J234 112 aa7.42□□□□□ -1.22
SHROOM4-203ENST00000460112 TFF3Q07654 80 aa7.42□□□□□ -1.22
SHROOM4-203ENST00000460112 NSUN5P1Q3KNT7 163 aa7.42□□□□□ -1.22
SHROOM4-203ENST00000460112 ZNF479Q96JC4 524 aa7.42□□□□□ -1.22
SHROOM4-203ENST00000460112 ITGB1BP1O14713 200 aa7.42□□□□□ -1.22
SHROOM4-203ENST00000460112 FDCSPQ8NFU4 85 aa7.42□□□□□ -1.22
SHROOM4-203ENST00000460112 ABCA2Q9BZC7 2435 aa7.42□□□□□ -1.22
SHROOM4-203ENST00000460112 PROB1E7EW31 1015 aa7.42□□□□□ -1.22
SHROOM4-203ENST00000460112 INAFM2P0DMQ5 153 aa7.42□□□□□ -1.22
SHROOM4-203ENST00000460112 MESP2Q0VG99 397 aa7.42□□□□□ -1.22
SHROOM4-203ENST00000460112 GAGE1Q13065 139 aa7.42□□□□□ -1.22
SHROOM4-203ENST00000460112 POU2AF1Q16633 256 aa7.42□□□□□ -1.22
SHROOM4-203ENST00000460112 SRSF8Q9BRL6 282 aaKnown RBP7.42□□□□□ -1.22
SHROOM4-203ENST00000460112 SLC25A39Q9BZJ4 359 aaPredicted RBP7.42□□□□□ -1.22
SHROOM4-203ENST00000460112 E9PLN8 166 aa7.42□□□□□ -1.22
SHROOM4-203ENST00000460112 IGHV3-49A0A0A0MS15 119 aa7.41□□□□□ -1.22
SHROOM4-203ENST00000460112 SERF1AO75920 110 aa7.41□□□□□ -1.22
SHROOM4-203ENST00000460112 RCHY1Q96PM5 261 aa7.41□□□□□ -1.22
SHROOM4-203ENST00000460112 EPDR1Q9UM22 224 aa7.41□□□□□ -1.22
SHROOM4-203ENST00000460112 SNAI2O43623 268 aa7.41□□□□□ -1.22
SHROOM4-203ENST00000460112 ATG2AQ2TAZ0 1938 aa7.41□□□□□ -1.22
SHROOM4-203ENST00000460112 Q6ZS49 121 aa7.41□□□□□ -1.22
SHROOM4-203ENST00000460112 IGLV3-32A0A0A0MS00 114 aa7.41□□□□□ -1.22
SHROOM4-203ENST00000460112 TNFRSF6BO95407 300 aa7.41□□□□□ -1.22
SHROOM4-203ENST00000460112 MRAPQ8TCY5 172 aa7.41□□□□□ -1.22
SHROOM4-203ENST00000460112 GLRX5Q86SX6 157 aa7.41□□□□□ -1.22
SHROOM4-203ENST00000460112 PTPRBP23467 1997 aa7.41□□□□□ -1.22
SHROOM4-203ENST00000460112 PAX4O43316 350 aa7.41□□□□□ -1.22
SHROOM4-203ENST00000460112 OR9G9P0C7N8 305 aa7.41□□□□□ -1.22
SHROOM4-203ENST00000460112 IGFBP3P17936 291 aaPredicted RBP7.41□□□□□ -1.22
SHROOM4-203ENST00000460112 C1orf194Q5T5A4 169 aa7.41□□□□□ -1.22
SHROOM4-203ENST00000460112 CENPVL1A0A0U1RR11 272 aa7.4□□□□□ -1.22
SHROOM4-203ENST00000460112 GZMBP10144 247 aa7.4□□□□□ -1.22
SHROOM4-203ENST00000460112 TSKUQ8WUA8 353 aa7.4□□□□□ -1.22
SHROOM4-203ENST00000460112 MYMXA0A1B0GTQ4 84 aa7.4□□□□□ -1.22
SHROOM4-203ENST00000460112 MMP23AO75900 390 aa7.4□□□□□ -1.22
SHROOM4-203ENST00000460112 ZNF497Q6ZNH5 498 aa7.4□□□□□ -1.22
SHROOM4-203ENST00000460112 LYPD1Q8N2G4 141 aa7.4□□□□□ -1.22
SHROOM4-203ENST00000460112 IGHV3-35A0A0C4DH35 117 aa7.4□□□□□ -1.22
SHROOM4-203ENST00000460112 TMEM155Q4W5P6 130 aa7.4□□□□□ -1.22
SHROOM4-203ENST00000460112 GATD1Q8NB37 220 aa7.4□□□□□ -1.22
SHROOM4-203ENST00000460112 IGHV3-11P01762 117 aa7.4□□□□□ -1.22
SHROOM4-203ENST00000460112 FAM216BQ8N7L0 139 aa7.4□□□□□ -1.22
SHROOM4-203ENST00000460112 MUC4Q99102 2169 aa7.4□□□□□ -1.22
SHROOM4-203ENST00000460112 IL18BPO95998 194 aa7.4□□□□□ -1.23
SHROOM4-203ENST00000460112 LINC00114Q6XXX2 140 aa7.4□□□□□ -1.23
SHROOM4-203ENST00000460112 REPIN1Q9BWE0 567 aaKnown RBP7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms