RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 LYRM1O43325 122 aa11.4□□□□□ -0.58
CHCHD3-204ENST00000457942 IGKV3-20P01619 116 aa11.4□□□□□ -0.58
CHCHD3-204ENST00000457942 ID1P41134 155 aa11.4□□□□□ -0.58
CHCHD3-204ENST00000457942 TCTAP57738 103 aa11.4□□□□□ -0.58
CHCHD3-204ENST00000457942 RPP30P78346 268 aaKnown RBP11.4□□□□□ -0.58
CHCHD3-204ENST00000457942 Q6ZTC4 211 aa11.4□□□□□ -0.58
CHCHD3-204ENST00000457942 SEPSECSQ9HD40 501 aaKnown RBP11.4□□□□□ -0.58
CHCHD3-204ENST00000457942 IGKV1D-37A0A075B6S9 117 aa11.39□□□□□ -0.59
CHCHD3-204ENST00000457942 ELOA3CA0A087WX78 387 aaPredicted RBP11.39□□□□□ -0.59
CHCHD3-204ENST00000457942 TRAV10A0A0B4J240 114 aa11.39□□□□□ -0.59
CHCHD3-204ENST00000457942 SNRPGP15A8MWD9 76 aa11.39□□□□□ -0.59
CHCHD3-204ENST00000457942 H3BMM0 161 aa11.39□□□□□ -0.59
CHCHD3-204ENST00000457942 HOXB5P09067 269 aa11.39□□□□□ -0.59
CHCHD3-204ENST00000457942 HLA-DRB4P13762 266 aa11.39□□□□□ -0.59
CHCHD3-204ENST00000457942 NKX2-1P43699 371 aaPredicted RBP11.39□□□□□ -0.59
CHCHD3-204ENST00000457942 S100ZQ8WXG8 99 aa11.39□□□□□ -0.59
CHCHD3-204ENST00000457942 CIB3Q96Q77 187 aaPredicted RBP11.39□□□□□ -0.59
CHCHD3-204ENST00000457942 C7orf50Q9BRJ6 194 aaKnown RBP11.39□□□□□ -0.59
CHCHD3-204ENST00000457942 CCDC32Q9BV29 185 aa11.39□□□□□ -0.59
CHCHD3-204ENST00000457942 MAGT1Q9H0U3 335 aa11.39□□□□□ -0.59
CHCHD3-204ENST00000457942 TMED3Q9Y3Q3 217 aa11.39□□□□□ -0.59
CHCHD3-204ENST00000457942 HLA-DRB4X5D2U9 266 aa11.39□□□□□ -0.59
CHCHD3-204ENST00000457942 TRAV6A0A075B6T7 132 aa11.38□□□□□ -0.59
CHCHD3-204ENST00000457942 WRBO00258 174 aa11.38□□□□□ -0.59
CHCHD3-204ENST00000457942 PITX3O75364 302 aa11.38□□□□□ -0.59
CHCHD3-204ENST00000457942 FXYD7P58549 80 aa11.38□□□□□ -0.59
CHCHD3-204ENST00000457942 UBE2MP61081 183 aaKnown RBP11.38□□□□□ -0.59
CHCHD3-204ENST00000457942 OR8I2Q8N0Y5 310 aa11.38□□□□□ -0.59
CHCHD3-204ENST00000457942 CSNK1G2-AS1Q8NCQ2 148 aa11.38□□□□□ -0.59
CHCHD3-204ENST00000457942 C20orf85Q9H1P6 137 aa11.38□□□□□ -0.59
CHCHD3-204ENST00000457942 BATF3Q9NR55 127 aa11.38□□□□□ -0.59
CHCHD3-204ENST00000457942 DYNC1H1Q14204 4646 aaKnown RBP11.38□□□□□ -0.59
CHCHD3-204ENST00000457942 IGHV3OR16-12A0A075B7B8 117 aa11.37□□□□□ -0.59
CHCHD3-204ENST00000457942 C9orf170A2RU37 121 aa11.37□□□□□ -0.59
CHCHD3-204ENST00000457942 SYNGR2O43760 224 aa11.37□□□□□ -0.59
CHCHD3-204ENST00000457942 SLC25A6P12236 298 aa11.37□□□□□ -0.59
CHCHD3-204ENST00000457942 PSMB3P49720 205 aa11.37□□□□□ -0.59
CHCHD3-204ENST00000457942 DEFB1P60022 68 aa11.37□□□□□ -0.59
CHCHD3-204ENST00000457942 AKR1C1Q04828 323 aa11.37□□□□□ -0.59
CHCHD3-204ENST00000457942 C4orf46Q504U0 113 aa11.37□□□□□ -0.59
CHCHD3-204ENST00000457942 ZNF767PQ75MW2 155 aa11.37□□□□□ -0.59
CHCHD3-204ENST00000457942 LRTM2Q8N967 370 aa11.37□□□□□ -0.59
CHCHD3-204ENST00000457942 OR4B1Q8NGF8 309 aa11.37□□□□□ -0.59
CHCHD3-204ENST00000457942 TRGV9Q99603 122 aa11.37□□□□□ -0.59
CHCHD3-204ENST00000457942 WDR12Q9GZL7 423 aaKnown RBP11.37□□□□□ -0.59
CHCHD3-204ENST00000457942 CELA1Q9UNI1 258 aa11.37□□□□□ -0.59
CHCHD3-204ENST00000457942 H3BP45 60 aa11.36□□□□□ -0.59
CHCHD3-204ENST00000457942 ADAP1O75689 374 aa11.36□□□□□ -0.59
CHCHD3-204ENST00000457942 OR4E1P0C645 316 aa11.36□□□□□ -0.59
CHCHD3-204ENST00000457942 ZNF846Q147U1 533 aa11.36□□□□□ -0.59
CHCHD3-204ENST00000457942 SPANXN5Q5MJ07 72 aa11.36□□□□□ -0.59
CHCHD3-204ENST00000457942 C1orf194Q5T5A4 169 aa11.36□□□□□ -0.59
CHCHD3-204ENST00000457942 GDF5OSQ5U4N7 250 aa11.36□□□□□ -0.59
CHCHD3-204ENST00000457942 GGNBP1Q5YKI7 109 aa11.36□□□□□ -0.59
CHCHD3-204ENST00000457942 FOXI2Q6ZQN5 318 aa11.36□□□□□ -0.59
CHCHD3-204ENST00000457942 SLC25A22Q9H936 323 aa11.36□□□□□ -0.59
CHCHD3-204ENST00000457942 APLNQ9ULZ1 77 aa11.36□□□□□ -0.59
CHCHD3-204ENST00000457942 IGHV4-4A0A075B6R2 117 aa11.35□□□□□ -0.59
CHCHD3-204ENST00000457942 SMCO3A2RU48 225 aa11.35□□□□□ -0.59
CHCHD3-204ENST00000457942 CFDP00746 253 aaPredicted RBP11.35□□□□□ -0.59
CHCHD3-204ENST00000457942 GALR1P47211 349 aa11.35□□□□□ -0.59
CHCHD3-204ENST00000457942 EMP1P54849 157 aa11.35□□□□□ -0.59
CHCHD3-204ENST00000457942 EBLN2Q6P2I7 272 aa11.35□□□□□ -0.59
CHCHD3-204ENST00000457942 GSG1LQ6UXU4 331 aa11.35□□□□□ -0.59
CHCHD3-204ENST00000457942 THAP8Q8NA92 274 aa11.35□□□□□ -0.59
CHCHD3-204ENST00000457942 BPIFCQ8NFQ6 507 aa11.35□□□□□ -0.59
CHCHD3-204ENST00000457942 C16orf92Q96LL3 132 aa11.35□□□□□ -0.59
CHCHD3-204ENST00000457942 SAV1Q9H4B6 383 aaPredicted RBP11.35□□□□□ -0.59
CHCHD3-204ENST00000457942 NUDT15Q9NV35 164 aa11.35□□□□□ -0.59
CHCHD3-204ENST00000457942 STRAPQ9Y3F4 350 aaKnown RBP11.35□□□□□ -0.59
CHCHD3-204ENST00000457942 IGKV1OR2-108A0A075B7D4 117 aa11.34□□□□□ -0.59
CHCHD3-204ENST00000457942 DEFB131BA0A096LNP1 70 aa11.34□□□□□ -0.59
CHCHD3-204ENST00000457942 TCRBP04435 133 aa11.34□□□□□ -0.59
CHCHD3-204ENST00000457942 ORM2P19652 201 aa11.34□□□□□ -0.59
CHCHD3-204ENST00000457942 IFITM3Q01628 133 aa11.34□□□□□ -0.59
CHCHD3-204ENST00000457942 SAMD13Q5VXD3 122 aa11.34□□□□□ -0.59
CHCHD3-204ENST00000457942 LINC00299Q6ZSB3 139 aa11.34□□□□□ -0.59
CHCHD3-204ENST00000457942 SEC22CQ9BRL7 303 aa11.34□□□□□ -0.59
CHCHD3-204ENST00000457942 ISLRO14498 428 aa11.33□□□□□ -0.6
CHCHD3-204ENST00000457942 UPK1BO75841 260 aa11.33□□□□□ -0.6
CHCHD3-204ENST00000457942 S100A7P31151 101 aa11.33□□□□□ -0.6
CHCHD3-204ENST00000457942 MEOX2P50222 304 aa11.33□□□□□ -0.6
CHCHD3-204ENST00000457942 C12orf74Q32Q52 190 aa11.33□□□□□ -0.6
CHCHD3-204ENST00000457942 ACOT7LQ6ZUV0 252 aa11.33□□□□□ -0.6
CHCHD3-204ENST00000457942 OR1B1Q8NGR6 318 aa11.33□□□□□ -0.6
CHCHD3-204ENST00000457942 TMEM147Q9BVK8 224 aa11.33□□□□□ -0.6
CHCHD3-204ENST00000457942 KRTAP4-5Q9BYR2 181 aa11.33□□□□□ -0.6
CHCHD3-204ENST00000457942 SLC25A32Q9H2D1 315 aa11.33□□□□□ -0.6
CHCHD3-204ENST00000457942 RPRMQ9NS64 109 aa11.33□□□□□ -0.6
CHCHD3-204ENST00000457942 DNAH11Q96DT5 4516 aa11.33□□□□□ -0.6
CHCHD3-204ENST00000457942 DNAH17Q9UFH2 4485 aa11.33□□□□□ -0.6
CHCHD3-204ENST00000457942 FAM240BA0A1B0GVZ2 78 aa11.32□□□□□ -0.6
CHCHD3-204ENST00000457942 F6UB75 175 aa11.32□□□□□ -0.6
CHCHD3-204ENST00000457942 SOCS3O14543 225 aa11.32□□□□□ -0.6
CHCHD3-204ENST00000457942 CCSO14618 274 aa11.32□□□□□ -0.6
CHCHD3-204ENST00000457942 MED14OSP0DP75 135 aa11.32□□□□□ -0.6
CHCHD3-204ENST00000457942 GATA2P23769 480 aaPredicted RBP11.32□□□□□ -0.6
CHCHD3-204ENST00000457942 SPATA31B1PQ5VZV4 182 aa11.32□□□□□ -0.6
CHCHD3-204ENST00000457942 ZNF705AQ6ZN79 300 aaPredicted RBP11.32□□□□□ -0.6
CHCHD3-204ENST00000457942 RSG1Q9BU20 258 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms