RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 H3BMM0 161 aa13□□□□□ -0.33
MSH6-207ENST00000456246 LYRM1O43325 122 aa13□□□□□ -0.33
MSH6-207ENST00000456246 IAH1Q2TAA2 248 aaPredicted RBP13□□□□□ -0.33
MSH6-207ENST00000456246 SPATA31B1PQ5VZV4 182 aa13□□□□□ -0.33
MSH6-207ENST00000456246 LINC00299Q6ZSB3 139 aa13□□□□□ -0.33
MSH6-207ENST00000456246 Q8NAQ8 132 aa13□□□□□ -0.33
MSH6-207ENST00000456246 SMIM8Q96KF7 97 aa13□□□□□ -0.33
MSH6-207ENST00000456246 C20orf85Q9H1P6 137 aa13□□□□□ -0.33
MSH6-207ENST00000456246 HRH4Q9H3N8 390 aa13□□□□□ -0.33
MSH6-207ENST00000456246 FNDC10F2Z333 226 aa12.99□□□□□ -0.33
MSH6-207ENST00000456246 ISLRO14498 428 aa12.99□□□□□ -0.33
MSH6-207ENST00000456246 SSSCA1O60232 199 aa12.99□□□□□ -0.33
MSH6-207ENST00000456246 GALR1P47211 349 aa12.99□□□□□ -0.33
MSH6-207ENST00000456246 TAS2R30P59541 319 aa12.99□□□□□ -0.33
MSH6-207ENST00000456246 S100A7AQ86SG5 101 aa12.99□□□□□ -0.33
MSH6-207ENST00000456246 GPR82Q96P67 336 aa12.99□□□□□ -0.33
MSH6-207ENST00000456246 CCDC32Q9BV29 185 aa12.99□□□□□ -0.33
MSH6-207ENST00000456246 TMEM147Q9BVK8 224 aa12.99□□□□□ -0.33
MSH6-207ENST00000456246 TBC1D24Q9ULP9 559 aa12.99□□□□□ -0.33
MSH6-207ENST00000456246 SOCS3O14543 225 aa12.98□□□□□ -0.33
MSH6-207ENST00000456246 TSC22D2O75157 780 aa12.98□□□□□ -0.33
MSH6-207ENST00000456246 FOXI2Q6ZQN5 318 aa12.98□□□□□ -0.33
MSH6-207ENST00000456246 ZBTB8BQ8NAP8 495 aaPredicted RBP12.98□□□□□ -0.33
MSH6-207ENST00000456246 CSNK1G2-AS1Q8NCQ2 148 aa12.98□□□□□ -0.33
MSH6-207ENST00000456246 CLUHP3Q96NS8 147 aa12.98□□□□□ -0.33
MSH6-207ENST00000456246 WDR12Q9GZL7 423 aaKnown RBP12.98□□□□□ -0.33
MSH6-207ENST00000456246 IGHV4-28A0A0C4DH34 117 aa12.97□□□□□ -0.33
MSH6-207ENST00000456246 SMCO3A2RU48 225 aa12.97□□□□□ -0.33
MSH6-207ENST00000456246 PLA2G10O15496 165 aa12.97□□□□□ -0.33
MSH6-207ENST00000456246 LY6G6CO95867 125 aa12.97□□□□□ -0.33
MSH6-207ENST00000456246 SCGB1D2O95969 90 aa12.97□□□□□ -0.33
MSH6-207ENST00000456246 TCTAP57738 103 aa12.97□□□□□ -0.33
MSH6-207ENST00000456246 NANOS2P60321 138 aaKnown RBP12.97□□□□□ -0.33
MSH6-207ENST00000456246 SELENOTP62341 195 aa12.97□□□□□ -0.33
MSH6-207ENST00000456246 DLK1P80370 383 aa12.97□□□□□ -0.33
MSH6-207ENST00000456246 TMEM14EPQ6UXP3 125 aa12.97□□□□□ -0.33
MSH6-207ENST00000456246 OR10P1Q8NGE3 313 aa12.97□□□□□ -0.33
MSH6-207ENST00000456246 LINC00052Q96N35 136 aa12.97□□□□□ -0.33
MSH6-207ENST00000456246 SAV1Q9H4B6 383 aaPredicted RBP12.97□□□□□ -0.33
MSH6-207ENST00000456246 X6R8D5 127 aa12.97□□□□□ -0.33
MSH6-207ENST00000456246 ALMS1Q8TCU4 4167 aa12.96□□□□□ -0.33
MSH6-207ENST00000456246 ZNF98A6NK75 572 aa12.96□□□□□ -0.33
MSH6-207ENST00000456246 C11orf94C9JXX5 98 aa12.96□□□□□ -0.33
MSH6-207ENST00000456246 DEFB4AO15263 64 aa12.96□□□□□ -0.33
MSH6-207ENST00000456246 TCRBP04435 133 aa12.96□□□□□ -0.33
MSH6-207ENST00000456246 IL5P05113 134 aa12.96□□□□□ -0.33
MSH6-207ENST00000456246 ORM2P19652 201 aa12.96□□□□□ -0.33
MSH6-207ENST00000456246 ZNF846Q147U1 533 aa12.96□□□□□ -0.33
MSH6-207ENST00000456246 CYP2G1PQ6ZSU1 146 aa12.96□□□□□ -0.33
MSH6-207ENST00000456246 OR1B1Q8NGR6 318 aa12.96□□□□□ -0.33
MSH6-207ENST00000456246 CLEC5AQ9NY25 188 aa12.96□□□□□ -0.33
MSH6-207ENST00000456246 MGAT4CQ9UBM8 478 aa12.96□□□□□ -0.33
MSH6-207ENST00000456246 RNF24Q9Y225 148 aa12.96□□□□□ -0.33
MSH6-207ENST00000456246 PLECQ15149 4684 aaKnown RBP12.95□□□□□ -0.34
MSH6-207ENST00000456246 PMS2P5A8MQ11 134 aa12.95□□□□□ -0.34
MSH6-207ENST00000456246 RAP2BP61225 183 aa12.95□□□□□ -0.34
MSH6-207ENST00000456246 EBLN2Q6P2I7 272 aa12.95□□□□□ -0.34
MSH6-207ENST00000456246 SLC25A32Q9H2D1 315 aa12.95□□□□□ -0.34
MSH6-207ENST00000456246 SLC25A22Q9H936 323 aa12.95□□□□□ -0.34
MSH6-207ENST00000456246 NPVFQ9HCQ7 196 aa12.95□□□□□ -0.34
MSH6-207ENST00000456246 RPRMQ9NS64 109 aa12.95□□□□□ -0.34
MSH6-207ENST00000456246 GSKIPQ9P0R6 139 aa12.95□□□□□ -0.34
MSH6-207ENST00000456246 XCL2Q9UBD3 114 aa12.95□□□□□ -0.34
MSH6-207ENST00000456246 K7EPK0 472 aa12.94□□□□□ -0.34
MSH6-207ENST00000456246 METTL15P1P0C7V9 234 aa12.94□□□□□ -0.34
MSH6-207ENST00000456246 RBMY1A1P0DJD3 496 aaKnown RBP12.94□□□□□ -0.34
MSH6-207ENST00000456246 RBMY1CP0DJD4 496 aa12.94□□□□□ -0.34
MSH6-207ENST00000456246 PAX9P55771 341 aa12.94□□□□□ -0.34
MSH6-207ENST00000456246 PLP1P60201 277 aa12.94□□□□□ -0.34
MSH6-207ENST00000456246 RBMY1FQ15415 496 aaKnown RBP12.94□□□□□ -0.34
MSH6-207ENST00000456246 C2CD4CQ8TF44 421 aa12.94□□□□□ -0.34
MSH6-207ENST00000456246 S100ZQ8WXG8 99 aa12.94□□□□□ -0.34
MSH6-207ENST00000456246 C16orf92Q96LL3 132 aa12.94□□□□□ -0.34
MSH6-207ENST00000456246 GGACTQ9BVM4 153 aa12.94□□□□□ -0.34
MSH6-207ENST00000456246 RCL1Q9Y2P8 373 aaKnown RBP12.94□□□□□ -0.34
MSH6-207ENST00000456246 HYPMO75409 117 aa12.93□□□□□ -0.34
MSH6-207ENST00000456246 GATA2P23769 480 aaPredicted RBP12.93□□□□□ -0.34
MSH6-207ENST00000456246 GDF5OSQ5U4N7 250 aa12.93□□□□□ -0.34
MSH6-207ENST00000456246 TEPPQ6URK8 271 aa12.93□□□□□ -0.34
MSH6-207ENST00000456246 ZNF431Q8TF32 576 aaPredicted RBP12.93□□□□□ -0.34
MSH6-207ENST00000456246 NEU1Q99519 415 aa12.93□□□□□ -0.34
MSH6-207ENST00000456246 NUDT15Q9NV35 164 aa12.93□□□□□ -0.34
MSH6-207ENST00000456246 HIGD1AQ9Y241 93 aa12.93□□□□□ -0.34
MSH6-207ENST00000456246 TRAV6A0A075B6T7 132 aa12.92□□□□□ -0.34
MSH6-207ENST00000456246 H3BRN7 92 aa12.92□□□□□ -0.34
MSH6-207ENST00000456246 L7N2F9 121 aa12.92□□□□□ -0.34
MSH6-207ENST00000456246 MBPP02686 304 aaPredicted RBP12.92□□□□□ -0.34
MSH6-207ENST00000456246 LINC00869P0C866 280 aa12.92□□□□□ -0.34
MSH6-207ENST00000456246 RPL7P18124 248 aaKnown RBP12.92□□□□□ -0.34
MSH6-207ENST00000456246 RRAS2P62070 204 aaPredicted RBP12.92□□□□□ -0.34
MSH6-207ENST00000456246 VAMP2P63027 116 aa12.92□□□□□ -0.34
MSH6-207ENST00000456246 PXDC1Q5TGL8 231 aa12.92□□□□□ -0.34
MSH6-207ENST00000456246 LGALS9CQ6DKI2 356 aa12.92□□□□□ -0.34
MSH6-207ENST00000456246 TMEM182Q6ZP80 229 aaPredicted RBP12.92□□□□□ -0.34
MSH6-207ENST00000456246 ZNF546Q86UE3 836 aa12.92□□□□□ -0.34
MSH6-207ENST00000456246 SHANK2-AS3Q9BTD1 123 aa12.92□□□□□ -0.34
MSH6-207ENST00000456246 RSG1Q9BU20 258 aa12.92□□□□□ -0.34
MSH6-207ENST00000456246 SLC25A39Q9BZJ4 359 aaPredicted RBP12.92□□□□□ -0.34
MSH6-207ENST00000456246 C7orf66A4D0T2 115 aa12.91□□□□□ -0.34
MSH6-207ENST00000456246 SMIM9A6NGZ8 99 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms