RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 IGHV4-28A0A0C4DH34 117 aa9.37□□□□□ -0.91
CHD3-206ENST00000452447 ZNF705EA8MWA4 302 aaPredicted RBP9.37□□□□□ -0.91
CHD3-206ENST00000452447 NDUFB6O95139 128 aa9.37□□□□□ -0.91
CHD3-206ENST00000452447 TCRBP04435 133 aa9.37□□□□□ -0.91
CHD3-206ENST00000452447 UBE2MP61081 183 aaKnown RBP9.37□□□□□ -0.91
CHD3-206ENST00000452447 OR2F1Q13607 317 aa9.37□□□□□ -0.91
CHD3-206ENST00000452447 GGNBP1Q5YKI7 109 aa9.37□□□□□ -0.91
CHD3-206ENST00000452447 NRARPQ7Z6K4 114 aa9.37□□□□□ -0.91
CHD3-206ENST00000452447 IQCF2Q8IXL9 164 aa9.37□□□□□ -0.91
CHD3-206ENST00000452447 TRGV9Q99603 122 aa9.37□□□□□ -0.91
CHD3-206ENST00000452447 C20orf85Q9H1P6 137 aa9.37□□□□□ -0.91
CHD3-206ENST00000452447 HRH4Q9H3N8 390 aa9.37□□□□□ -0.91
CHD3-206ENST00000452447 VPS13DQ5THJ4 4388 aa9.36□□□□□ -0.91
CHD3-206ENST00000452447 DNAH6Q9C0G6 4158 aa9.36□□□□□ -0.91
CHD3-206ENST00000452447 hCG_2014768A0A024R1R8 64 aa9.36□□□□□ -0.91
CHD3-206ENST00000452447 PRAF2O60831 178 aa9.36□□□□□ -0.91
CHD3-206ENST00000452447 CFDP00746 253 aaPredicted RBP9.36□□□□□ -0.91
CHD3-206ENST00000452447 ID1P41134 155 aa9.36□□□□□ -0.91
CHD3-206ENST00000452447 NKX2-1P43699 371 aaPredicted RBP9.36□□□□□ -0.91
CHD3-206ENST00000452447 SPANXN5Q5MJ07 72 aa9.36□□□□□ -0.91
CHD3-206ENST00000452447 C1orf194Q5T5A4 169 aa9.36□□□□□ -0.91
CHD3-206ENST00000452447 OR8I2Q8N0Y5 310 aa9.36□□□□□ -0.91
CHD3-206ENST00000452447 C2CD4CQ8TF44 421 aa9.36□□□□□ -0.91
CHD3-206ENST00000452447 LINC00052Q96N35 136 aa9.36□□□□□ -0.91
CHD3-206ENST00000452447 GPN1Q9HCN4 374 aaPredicted RBP9.36□□□□□ -0.91
CHD3-206ENST00000452447 NUDT15Q9NV35 164 aa9.36□□□□□ -0.91
CHD3-206ENST00000452447 C9orf170A2RU37 121 aa9.35□□□□□ -0.91
CHD3-206ENST00000452447 H3BMM0 161 aa9.35□□□□□ -0.91
CHD3-206ENST00000452447 RBMY1A1P0DJD3 496 aaKnown RBP9.35□□□□□ -0.91
CHD3-206ENST00000452447 RBMY1CP0DJD4 496 aa9.35□□□□□ -0.91
CHD3-206ENST00000452447 BCAP31P51572 246 aa9.35□□□□□ -0.91
CHD3-206ENST00000452447 RBMY1FQ15415 496 aaKnown RBP9.35□□□□□ -0.91
CHD3-206ENST00000452447 LGALS9CQ6DKI2 356 aa9.35□□□□□ -0.91
CHD3-206ENST00000452447 THAP8Q8NA92 274 aa9.35□□□□□ -0.91
CHD3-206ENST00000452447 CSNK1G2-AS1Q8NCQ2 148 aa9.35□□□□□ -0.91
CHD3-206ENST00000452447 COQ8AQ8NI60 647 aa9.35□□□□□ -0.91
CHD3-206ENST00000452447 XCL2Q9UBD3 114 aa9.35□□□□□ -0.91
CHD3-206ENST00000452447 IGKV1OR2-108A0A075B7D4 117 aa9.34□□□□□ -0.91
CHD3-206ENST00000452447 C11orf94C9JXX5 98 aa9.34□□□□□ -0.91
CHD3-206ENST00000452447 H3BP45 60 aa9.34□□□□□ -0.91
CHD3-206ENST00000452447 H2AFB2P0C5Z0 115 aa9.34□□□□□ -0.91
CHD3-206ENST00000452447 HLA-DRB4P13762 266 aa9.34□□□□□ -0.91
CHD3-206ENST00000452447 BTCP35070 178 aa9.34□□□□□ -0.91
CHD3-206ENST00000452447 TCTAP57738 103 aa9.34□□□□□ -0.91
CHD3-206ENST00000452447 OXA1LQ15070 435 aa9.34□□□□□ -0.91
CHD3-206ENST00000452447 STRAPQ9Y3F4 350 aaKnown RBP9.34□□□□□ -0.91
CHD3-206ENST00000452447 HLA-DRB4X5D2U9 266 aa9.34□□□□□ -0.91
CHD3-206ENST00000452447 X6R8D5 127 aa9.34□□□□□ -0.91
CHD3-206ENST00000452447 ADAP1O75689 374 aa9.33□□□□□ -0.92
CHD3-206ENST00000452447 IFNA21P01568 189 aa9.33□□□□□ -0.92
CHD3-206ENST00000452447 HLA-DMBP28068 263 aa9.33□□□□□ -0.92
CHD3-206ENST00000452447 PSMB3P49720 205 aa9.33□□□□□ -0.92
CHD3-206ENST00000452447 AKR1C1Q04828 323 aa9.33□□□□□ -0.92
CHD3-206ENST00000452447 SAMD13Q5VXD3 122 aa9.33□□□□□ -0.92
CHD3-206ENST00000452447 BPIFCQ8NFQ6 507 aa9.33□□□□□ -0.92
CHD3-206ENST00000452447 MARVELD1Q9BSK0 173 aa9.33□□□□□ -0.92
CHD3-206ENST00000452447 DNAH10Q8IVF4 4471 aa9.33□□□□□ -0.92
CHD3-206ENST00000452447 TRAV6A0A075B6T7 132 aa9.33□□□□□ -0.92
CHD3-206ENST00000452447 IGLL5B9A064 214 aa9.33□□□□□ -0.92
CHD3-206ENST00000452447 PRSS46E5RG02 174 aa9.33□□□□□ -0.92
CHD3-206ENST00000452447 INMT-MINDY4F8WBC2 141 aa9.33□□□□□ -0.92
CHD3-206ENST00000452447 BOLA2-SMG1P6H3BVE0 249 aa9.33□□□□□ -0.92
CHD3-206ENST00000452447 IGKV3-20P01619 116 aa9.33□□□□□ -0.92
CHD3-206ENST00000452447 OR4E1P0C645 316 aa9.33□□□□□ -0.92
CHD3-206ENST00000452447 S100A7P31151 101 aa9.33□□□□□ -0.92
CHD3-206ENST00000452447 ID3Q02535 119 aa9.33□□□□□ -0.92
CHD3-206ENST00000452447 C4orf46Q504U0 113 aa9.33□□□□□ -0.92
CHD3-206ENST00000452447 FOXI2Q6ZQN5 318 aa9.33□□□□□ -0.92
CHD3-206ENST00000452447 SLC25A22Q9H936 323 aa9.33□□□□□ -0.92
CHD3-206ENST00000452447 FLVCR2Q9UPI3 526 aa9.33□□□□□ -0.92
CHD3-206ENST00000452447 ELOA3CA0A087WX78 387 aaPredicted RBP9.32□□□□□ -0.92
CHD3-206ENST00000452447 SMCO3A2RU48 225 aa9.32□□□□□ -0.92
CHD3-206ENST00000452447 ISLRO14498 428 aa9.32□□□□□ -0.92
CHD3-206ENST00000452447 ORM2P19652 201 aa9.32□□□□□ -0.92
CHD3-206ENST00000452447 GALR1P47211 349 aa9.32□□□□□ -0.92
CHD3-206ENST00000452447 POLR2GP62487 172 aaKnown RBP eCLIP9.32□□□□□ -0.92
CHD3-206ENST00000452447 GDF5OSQ5U4N7 250 aa9.32□□□□□ -0.92
CHD3-206ENST00000452447 ACOT7LQ6ZUV0 252 aa9.32□□□□□ -0.92
CHD3-206ENST00000452447 RPP25LQ8N5L8 163 aaKnown RBP9.32□□□□□ -0.92
CHD3-206ENST00000452447 SAV1Q9H4B6 383 aaPredicted RBP9.32□□□□□ -0.92
CHD3-206ENST00000452447 PSENENQ9NZ42 101 aa9.32□□□□□ -0.92
CHD3-206ENST00000452447 SLC45A2Q9UMX9 530 aa9.32□□□□□ -0.92
CHD3-206ENST00000452447 SOCS3O14543 225 aa9.31□□□□□ -0.92
CHD3-206ENST00000452447 SSSCA1O60232 199 aa9.31□□□□□ -0.92
CHD3-206ENST00000452447 DEDDO75618 318 aa9.31□□□□□ -0.92
CHD3-206ENST00000452447 GATA2P23769 480 aaPredicted RBP9.31□□□□□ -0.92
CHD3-206ENST00000452447 MEOX2P50222 304 aa9.31□□□□□ -0.92
CHD3-206ENST00000452447 DEFB1P60022 68 aa9.31□□□□□ -0.92
CHD3-206ENST00000452447 SPATA31B1PQ5VZV4 182 aa9.31□□□□□ -0.92
CHD3-206ENST00000452447 EBLN2Q6P2I7 272 aa9.31□□□□□ -0.92
CHD3-206ENST00000452447 Q6ZTC4 211 aa9.31□□□□□ -0.92
CHD3-206ENST00000452447 TMEM144Q7Z5S9 345 aa9.31□□□□□ -0.92
CHD3-206ENST00000452447 OR4B1Q8NGF8 309 aa9.31□□□□□ -0.92
CHD3-206ENST00000452447 OR1B1Q8NGR6 318 aa9.31□□□□□ -0.92
CHD3-206ENST00000452447 C16orf92Q96LL3 132 aa9.31□□□□□ -0.92
CHD3-206ENST00000452447 TMEM147Q9BVK8 224 aa9.31□□□□□ -0.92
CHD3-206ENST00000452447 TRAV10A0A0B4J240 114 aa9.3□□□□□ -0.92
CHD3-206ENST00000452447 ZNF98A6NK75 572 aa9.3□□□□□ -0.92
CHD3-206ENST00000452447 ANXA7P20073 488 aaKnown RBP9.3□□□□□ -0.92
CHD3-206ENST00000452447 FXYD7P58549 80 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms