RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 PFDN2Q9UHV9 154 aa9.03□□□□□ -0.96
CPSF4-208ENST00000452047 PAIP2BQ9ULR5 123 aaKnown RBP9.03□□□□□ -0.96
CPSF4-208ENST00000452047 FLVCR2Q9UPI3 526 aa9.03□□□□□ -0.96
CPSF4-208ENST00000452047 HLA-DRB4X5D2U9 266 aa9.03□□□□□ -0.96
CPSF4-208ENST00000452047 VPS13DQ5THJ4 4388 aa9.03□□□□□ -0.96
CPSF4-208ENST00000452047 H3BP45 60 aa9.02□□□□□ -0.97
CPSF4-208ENST00000452047 RPP30P78346 268 aaKnown RBP9.02□□□□□ -0.97
CPSF4-208ENST00000452047 ID3Q02535 119 aa9.02□□□□□ -0.97
CPSF4-208ENST00000452047 SPANXN5Q5MJ07 72 aa9.02□□□□□ -0.97
CPSF4-208ENST00000452047 LGALS9CQ6DKI2 356 aa9.02□□□□□ -0.97
CPSF4-208ENST00000452047 TBC1D24Q9ULP9 559 aa9.02□□□□□ -0.97
CPSF4-208ENST00000452047 ELOA3CA0A087WX78 387 aaPredicted RBP9.01□□□□□ -0.97
CPSF4-208ENST00000452047 OR4E1P0C645 316 aa9.01□□□□□ -0.97
CPSF4-208ENST00000452047 INPP1P49441 399 aa9.01□□□□□ -0.97
CPSF4-208ENST00000452047 PSMB3P49720 205 aa9.01□□□□□ -0.97
CPSF4-208ENST00000452047 DEFB1P60022 68 aa9.01□□□□□ -0.97
CPSF4-208ENST00000452047 NUTF2P61970 127 aaKnown RBP9.01□□□□□ -0.97
CPSF4-208ENST00000452047 POLR2GP62487 172 aaKnown RBP eCLIP9.01□□□□□ -0.97
CPSF4-208ENST00000452047 TMEM182Q6ZP80 229 aaPredicted RBP9.01□□□□□ -0.97
CPSF4-208ENST00000452047 ACOT7LQ6ZUV0 252 aa9.01□□□□□ -0.97
CPSF4-208ENST00000452047 OR4D5Q8NGN0 318 aa9.01□□□□□ -0.97
CPSF4-208ENST00000452047 C1QTNF4Q9BXJ3 329 aa9.01□□□□□ -0.97
CPSF4-208ENST00000452047 SAV1Q9H4B6 383 aaPredicted RBP9.01□□□□□ -0.97
CPSF4-208ENST00000452047 XCL2Q9UBD3 114 aa9.01□□□□□ -0.97
CPSF4-208ENST00000452047 SLC45A2Q9UMX9 530 aa9.01□□□□□ -0.97
CPSF4-208ENST00000452047 STRAPQ9Y3F4 350 aaKnown RBP9.01□□□□□ -0.97
CPSF4-208ENST00000452047 LINC00854A0A1B0GVQ3 168 aa9□□□□□ -0.97
CPSF4-208ENST00000452047 CFDP00746 253 aaPredicted RBP9□□□□□ -0.97
CPSF4-208ENST00000452047 IL7P13232 177 aa9□□□□□ -0.97
CPSF4-208ENST00000452047 ANXA7P20073 488 aaKnown RBP9□□□□□ -0.97
CPSF4-208ENST00000452047 GSG1LQ6UXU4 331 aa9□□□□□ -0.97
CPSF4-208ENST00000452047 FOXI2Q6ZQN5 318 aa9□□□□□ -0.97
CPSF4-208ENST00000452047 OR8I2Q8N0Y5 310 aa9□□□□□ -0.97
CPSF4-208ENST00000452047 RPP25LQ8N5L8 163 aaKnown RBP9□□□□□ -0.97
CPSF4-208ENST00000452047 COQ8AQ8NI60 647 aa9□□□□□ -0.97
CPSF4-208ENST00000452047 C2CD4CQ8TF44 421 aa9□□□□□ -0.97
CPSF4-208ENST00000452047 C17orf77Q96MU5 243 aa9□□□□□ -0.97
CPSF4-208ENST00000452047 CLUHP3Q96NS8 147 aa9□□□□□ -0.97
CPSF4-208ENST00000452047 C7orf50Q9BRJ6 194 aaKnown RBP9□□□□□ -0.97
CPSF4-208ENST00000452047 ZNF98A6NK75 572 aa8.99□□□□□ -0.97
CPSF4-208ENST00000452047 PMS2P5A8MQ11 134 aa8.99□□□□□ -0.97
CPSF4-208ENST00000452047 C11orf94C9JXX5 98 aa8.99□□□□□ -0.97
CPSF4-208ENST00000452047 ISLRO14498 428 aa8.99□□□□□ -0.97
CPSF4-208ENST00000452047 UPK1BO75841 260 aa8.99□□□□□ -0.97
CPSF4-208ENST00000452047 GATA2P23769 480 aaPredicted RBP8.99□□□□□ -0.97
CPSF4-208ENST00000452047 HLA-DMBP28068 263 aa8.99□□□□□ -0.97
CPSF4-208ENST00000452047 ID1P41134 155 aa8.99□□□□□ -0.97
CPSF4-208ENST00000452047 TCTAP57738 103 aa8.99□□□□□ -0.97
CPSF4-208ENST00000452047 AKR1C1Q04828 323 aa8.99□□□□□ -0.97
CPSF4-208ENST00000452047 ZNF705AQ6ZN79 300 aaPredicted RBP8.99□□□□□ -0.97
CPSF4-208ENST00000452047 Q6ZTC4 211 aa8.99□□□□□ -0.97
CPSF4-208ENST00000452047 TMEM144Q7Z5S9 345 aa8.99□□□□□ -0.97
CPSF4-208ENST00000452047 ZNF709Q8N972 641 aa8.99□□□□□ -0.97
CPSF4-208ENST00000452047 LINC00052Q96N35 136 aa8.99□□□□□ -0.97
CPSF4-208ENST00000452047 SLC25A32Q9H2D1 315 aa8.99□□□□□ -0.97
CPSF4-208ENST00000452047 CELA1Q9UNI1 258 aa8.99□□□□□ -0.97
CPSF4-208ENST00000452047 CENPXA8MT69 81 aa8.98□□□□□ -0.97
CPSF4-208ENST00000452047 ZNF705FA8MVS1 300 aaPredicted RBP8.98□□□□□ -0.97
CPSF4-208ENST00000452047 SSSCA1O60232 199 aa8.98□□□□□ -0.97
CPSF4-208ENST00000452047 DEDDO75618 318 aa8.98□□□□□ -0.97
CPSF4-208ENST00000452047 IFNA21P01568 189 aa8.98□□□□□ -0.97
CPSF4-208ENST00000452047 ZNF705DP0CH99 300 aaPredicted RBP8.98□□□□□ -0.97
CPSF4-208ENST00000452047 ZNF705BP0CI00 300 aaPredicted RBP8.98□□□□□ -0.97
CPSF4-208ENST00000452047 PAX9P55771 341 aa8.98□□□□□ -0.97
CPSF4-208ENST00000452047 C4orf46Q504U0 113 aa8.98□□□□□ -0.97
CPSF4-208ENST00000452047 SAMD13Q5VXD3 122 aa8.98□□□□□ -0.97
CPSF4-208ENST00000452047 ZBTB8BQ8NAP8 495 aaPredicted RBP8.98□□□□□ -0.97
CPSF4-208ENST00000452047 BPIFCQ8NFQ6 507 aa8.98□□□□□ -0.97
CPSF4-208ENST00000452047 SMIM8Q96KF7 97 aa8.98□□□□□ -0.97
CPSF4-208ENST00000452047 CCDC32Q9BV29 185 aa8.98□□□□□ -0.97
CPSF4-208ENST00000452047 PSENENQ9NZ42 101 aa8.98□□□□□ -0.97
CPSF4-208ENST00000452047 F6UB75 175 aa8.97□□□□□ -0.97
CPSF4-208ENST00000452047 PLA2G10O15496 165 aa8.97□□□□□ -0.97
CPSF4-208ENST00000452047 CCNKO75909 580 aa8.97□□□□□ -0.97
CPSF4-208ENST00000452047 PTTG1O95997 202 aa8.97□□□□□ -0.97
CPSF4-208ENST00000452047 IGKV3-20P01619 116 aa8.97□□□□□ -0.97
CPSF4-208ENST00000452047 ORM2P19652 201 aa8.97□□□□□ -0.97
CPSF4-208ENST00000452047 GALR1P47211 349 aa8.97□□□□□ -0.97
CPSF4-208ENST00000452047 MEOX2P50222 304 aa8.97□□□□□ -0.97
CPSF4-208ENST00000452047 DEFA1P59665 94 aa8.97□□□□□ -0.97
CPSF4-208ENST00000452047 DEFA3P59666 94 aa8.97□□□□□ -0.97
CPSF4-208ENST00000452047 SPATA31B1PQ5VZV4 182 aa8.97□□□□□ -0.97
CPSF4-208ENST00000452047 TMEM14EPQ6UXP3 125 aa8.97□□□□□ -0.97
CPSF4-208ENST00000452047 CHAC2Q8WUX2 184 aa8.97□□□□□ -0.97
CPSF4-208ENST00000452047 MITD1Q8WV92 249 aa8.97□□□□□ -0.97
CPSF4-208ENST00000452047 C20orf173Q96LM9 149 aa8.97□□□□□ -0.97
CPSF4-208ENST00000452047 NEU1Q99519 415 aa8.97□□□□□ -0.97
CPSF4-208ENST00000452047 SLC25A22Q9H936 323 aa8.97□□□□□ -0.97
CPSF4-208ENST00000452047 APLNQ9ULZ1 77 aa8.97□□□□□ -0.97
CPSF4-208ENST00000452047 RCL1Q9Y2P8 373 aaKnown RBP8.97□□□□□ -0.97
CPSF4-208ENST00000452047 DNAH10Q8IVF4 4471 aa8.97□□□□□ -0.97
CPSF4-208ENST00000452047 DNAH6Q9C0G6 4158 aa8.97□□□□□ -0.97
CPSF4-208ENST00000452047 TRAV10A0A0B4J240 114 aa8.96□□□□□ -0.98
CPSF4-208ENST00000452047 A0A0J9YX75 114 aa8.96□□□□□ -0.98
CPSF4-208ENST00000452047 A8MTW9 85 aa8.96□□□□□ -0.98
CPSF4-208ENST00000452047 IGLL5B9A064 214 aa8.96□□□□□ -0.98
CPSF4-208ENST00000452047 H3BRN7 92 aa8.96□□□□□ -0.98
CPSF4-208ENST00000452047 FXYD7P58549 80 aa8.96□□□□□ -0.98
CPSF4-208ENST00000452047 PRR20EP86478 221 aa8.96□□□□□ -0.98
CPSF4-208ENST00000452047 PRR20CP86479 221 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms