RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 GUCD1Q96NT3 240 aa3.29□□□□□ -1.88
HMGB3P22-202ENST00000451823 ZNF355PQ9NSJ1 428 aa3.29□□□□□ -1.88
HMGB3P22-202ENST00000451823 HSPB8Q9UJY1 196 aa3.29□□□□□ -1.88
HMGB3P22-202ENST00000451823 PSG11Q9UQ72 335 aa3.29□□□□□ -1.88
HMGB3P22-202ENST00000451823 AMMECR1Q9Y4X0 333 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P22-202ENST00000451823 HCFC1P51610 2035 aa3.29□□□□□ -1.88
HMGB3P22-202ENST00000451823 KIAA0100Q14667 2235 aaKnown RBP3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 IGKV1D-37A0A075B6S9 117 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 A0A1W2PPM0 123 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 M0R296 226 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 WNT9BO14905 357 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 SPINT2O43291 252 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 LTAP01374 205 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 IGHV3-9P01782 118 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 MGST1P10620 155 aaKnown RBP3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 CCNOP22674 350 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 HTR1DP28221 377 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 S100A7P31151 101 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 OTX2P32243 289 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 CFHR2P36980 270 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 ERVK-16P61578 105 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 HSD52Q0P140 79 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 LGALS9BQ3B8N2 356 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 LYSMD4Q5XG99 296 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 LGALS9CQ6DKI2 356 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 GUSBP11Q6P575 273 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 WDR82Q6UXN9 313 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 LINC00696Q6ZRV3 163 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 MDP1Q86V88 176 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 BPIFA4PQ86YQ2 179 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 VKORC1L1Q8N0U8 176 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 TMEM251Q8N6I4 163 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 CD177Q8N6Q3 437 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 TPRX1Q8N7U7 411 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 THAP8Q8NA92 274 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 SMRP1Q8NCR6 262 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 OR2Z1Q8NG97 314 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 OR9G4Q8NGQ1 327 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 OR2K2Q8NGT1 345 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 VSTM2AQ8TAG5 236 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 PHLDA1Q8WV24 401 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 TMEM190Q8WZ59 177 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 LINC00479Q96M42 142 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 GPR82Q96P67 336 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 S1PR3Q99500 378 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 DCTN5Q9BTE1 182 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 MAP1LC3CQ9BXW4 147 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 CXXC4Q9H2H0 198 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 RPP21Q9H633 154 aaKnown RBP3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 LINC00574Q9H8X3 128 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 SIGLEC8Q9NYZ4 499 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 DKK4Q9UBT3 224 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 PRNDQ9UKY0 176 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 EPDR1Q9UM22 224 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 KLF13Q9Y2Y9 288 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 U3KQK5 164 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 KNL1Q8NG31 2342 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 COL27A1Q8IZC6 1860 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 FREM1Q5H8C1 2179 aa3.28□□□□□ -1.88
HMGB3P22-202ENST00000451823 IGHV3-43A0A0B4J1X8 118 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 TRAV5A0A0B4J249 113 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 A0A0G2JLM5 398 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 TEX50A0A1B0GTY4 177 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 A6NDN8 102 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 LINC01546A6NGU7 62 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 A8MWL6 223 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 ACTL6BO94805 426 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 NCR2O95944 276 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 MOSP00540 346 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 CLEC3BP05452 202 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 IGHV3-43DP0DP04 118 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 NANOS2P60321 138 aaKnown RBP3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 UBE2L3P68036 154 aaKnown RBP3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 SRSF6Q13247 344 aaKnown RBP3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 RPL39P5Q59GN2 51 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 CT45A1Q5HYN5 189 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 PSMG4Q5JS54 123 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 ASPHD1Q5U4P2 390 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 C9orf135Q5VTT2 229 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 SAMD13Q5VXD3 122 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 ZNF493Q6ZR52 646 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 RBPMS2Q6ZRY4 209 aaKnown RBP3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 C9orf47Q6ZRZ4 202 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 ZNF826PQ6ZT77 177 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 PIP4P1Q86T03 277 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 MOB3BQ86TA1 216 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 OR4X2Q8NGF9 303 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 OR10AG1Q8NH19 301 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 OR4A5Q8NH83 315 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 OR9G1Q8NH87 305 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 CT45A3Q8NHU0 189 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 RFESDQ8TAC1 157 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 GLMPQ8WWB7 406 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 ZC2HC1AQ96GY0 325 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 ADTRPQ96IZ2 230 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 PAXXQ9BUH6 204 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 FNDC4Q9H6D8 234 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 PLEKHA3Q9HB20 300 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 HIGD1BQ9P298 99 aa3.27□□□□□ -1.89
HMGB3P22-202ENST00000451823 CLCF1Q9UBD9 225 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms