RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 SOHLH1Q5JUK2 328 aa7.51□□□□□ -1.21
RFC4-210ENST00000449502 ZNF343Q6P1L6 599 aa7.51□□□□□ -1.21
RFC4-210ENST00000449502 TOMM20LQ6UXN7 152 aa7.51□□□□□ -1.21
RFC4-210ENST00000449502 LCNL1Q6ZST4 164 aa7.51□□□□□ -1.21
RFC4-210ENST00000449502 Q6ZSV7 163 aa7.51□□□□□ -1.21
RFC4-210ENST00000449502 BPIFA4PQ86YQ2 179 aa7.51□□□□□ -1.21
RFC4-210ENST00000449502 SUN5Q8TC36 379 aa7.51□□□□□ -1.21
RFC4-210ENST00000449502 LINC00052Q96N35 136 aa7.51□□□□□ -1.21
RFC4-210ENST00000449502 OR5B12Q96R08 314 aa7.51□□□□□ -1.21
RFC4-210ENST00000449502 SCRT1Q9BWW7 348 aa7.51□□□□□ -1.21
RFC4-210ENST00000449502 APCP25054 2843 aa7.5□□□□□ -1.21
RFC4-210ENST00000449502 ZNF320A2RRD8 509 aa7.5□□□□□ -1.21
RFC4-210ENST00000449502 H3BRN7 92 aa7.5□□□□□ -1.21
RFC4-210ENST00000449502 NDUFA4O00483 81 aa7.5□□□□□ -1.21
RFC4-210ENST00000449502 PDE6DO43924 150 aa7.5□□□□□ -1.21
RFC4-210ENST00000449502 APOC3P02656 99 aa7.5□□□□□ -1.21
RFC4-210ENST00000449502 RPLP1P05386 114 aaKnown RBP7.5□□□□□ -1.21
RFC4-210ENST00000449502 SRP19P09132 144 aaKnown RBP7.5□□□□□ -1.21
RFC4-210ENST00000449502 RPL7P18124 248 aaKnown RBP7.5□□□□□ -1.21
RFC4-210ENST00000449502 BMI1P35226 326 aa7.5□□□□□ -1.21
RFC4-210ENST00000449502 KIAA0141Q14154 515 aaPredicted RBP7.5□□□□□ -1.21
RFC4-210ENST00000449502 USF2Q15853 346 aaPredicted RBP7.5□□□□□ -1.21
RFC4-210ENST00000449502 FAM106AQ4KMX7 169 aa7.5□□□□□ -1.21
RFC4-210ENST00000449502 OR8I2Q8N0Y5 310 aa7.5□□□□□ -1.21
RFC4-210ENST00000449502 KLHDC1Q8N7A1 406 aa7.5□□□□□ -1.21
RFC4-210ENST00000449502 BLNKQ8WV28 456 aa7.5□□□□□ -1.21
RFC4-210ENST00000449502 SEC11CQ9BY50 192 aa7.5□□□□□ -1.21
RFC4-210ENST00000449502 NKX6-2Q9C056 277 aaPredicted RBP7.5□□□□□ -1.21
RFC4-210ENST00000449502 SERTAD4Q9NUC0 356 aa7.5□□□□□ -1.21
RFC4-210ENST00000449502 TMEM14CQ9P0S9 112 aa7.5□□□□□ -1.21
RFC4-210ENST00000449502 ARL2-SNX15V9GYD0 113 aa7.5□□□□□ -1.21
RFC4-210ENST00000449502 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.49□□□□□ -1.215e-8■■■■■ 64.9
RFC4-210ENST00000449502 A0A1W2PS18 150 aa7.49□□□□□ -1.21
RFC4-210ENST00000449502 ZNF98A6NK75 572 aa7.49□□□□□ -1.21
RFC4-210ENST00000449502 CRLF1O75462 422 aa7.49□□□□□ -1.21
RFC4-210ENST00000449502 LGALS1P09382 135 aaKnown RBP7.49□□□□□ -1.21
RFC4-210ENST00000449502 PYYP10082 97 aa7.49□□□□□ -1.21
RFC4-210ENST00000449502 HIST1H1EP10412 219 aaKnown RBP7.49□□□□□ -1.21
RFC4-210ENST00000449502 ATF4P18848 351 aaPredicted RBP7.49□□□□□ -1.21
RFC4-210ENST00000449502 RPEL1Q2QD12 228 aa7.49□□□□□ -1.21
RFC4-210ENST00000449502 MORN5Q5VZ52 161 aa7.49□□□□□ -1.21
RFC4-210ENST00000449502 LEMD1Q68G75 181 aa7.49□□□□□ -1.21
RFC4-210ENST00000449502 SVBPQ8N300 66 aa7.49□□□□□ -1.21
RFC4-210ENST00000449502 DPF1Q92782 380 aa7.49□□□□□ -1.21
RFC4-210ENST00000449502 GRAMD2BQ96HH9 432 aa7.49□□□□□ -1.21
RFC4-210ENST00000449502 FAM167A-AS1Q96KT0 104 aa7.49□□□□□ -1.21
RFC4-210ENST00000449502 UBE2E2Q96LR5 201 aa7.49□□□□□ -1.21
RFC4-210ENST00000449502 C16orf95Q9H693 158 aa7.49□□□□□ -1.21
RFC4-210ENST00000449502 TET2Q6N021 2002 aaPredicted RBP7.49□□□□□ -1.21
RFC4-210ENST00000449502 UNC79Q9P2D8 2635 aa7.48□□□□□ -1.21
RFC4-210ENST00000449502 TACC2O95359 2948 aa7.48□□□□□ -1.21
RFC4-210ENST00000449502 CREBBPQ92793 2442 aa7.48□□□□□ -1.21
RFC4-210ENST00000449502 IGHV3OR16-8A0A075B7F1 116 aa7.48□□□□□ -1.21
RFC4-210ENST00000449502 A0A1W2PRE2 83 aa7.48□□□□□ -1.21
RFC4-210ENST00000449502 FAM74A7A6NL05 159 aa7.48□□□□□ -1.21
RFC4-210ENST00000449502 ZNF785A8K8V0 405 aa7.48□□□□□ -1.21
RFC4-210ENST00000449502 C9JQL5 133 aa7.48□□□□□ -1.21
RFC4-210ENST00000449502 TMEM250H0YL14 139 aa7.48□□□□□ -1.21
RFC4-210ENST00000449502 HAX1O00165 279 aa7.48□□□□□ -1.21
RFC4-210ENST00000449502 NDUFS6O75380 124 aaKnown RBP7.48□□□□□ -1.21
RFC4-210ENST00000449502 TRBV12-3P01733 135 aa7.48□□□□□ -1.21
RFC4-210ENST00000449502 NBEAP1P0C6P0 100 aa7.48□□□□□ -1.21
RFC4-210ENST00000449502 GALR1P47211 349 aa7.48□□□□□ -1.21
RFC4-210ENST00000449502 ATP5G3P48201 142 aa7.48□□□□□ -1.21
RFC4-210ENST00000449502 ZNF674Q2M3X9 581 aa7.48□□□□□ -1.21
RFC4-210ENST00000449502 C10orf99Q6UWK7 81 aa7.48□□□□□ -1.21
RFC4-210ENST00000449502 CYB561D1Q8N8Q1 229 aa7.48□□□□□ -1.21
RFC4-210ENST00000449502 FXYD5Q96DB9 178 aa7.48□□□□□ -1.21
RFC4-210ENST00000449502 GPR82Q96P67 336 aa7.48□□□□□ -1.21
RFC4-210ENST00000449502 UFC1Q9Y3C8 167 aa7.48□□□□□ -1.21
RFC4-210ENST00000449502 YTHDF2Q9Y5A9 579 aaKnown RBP7.48□□□□□ -1.21
RFC4-210ENST00000449502 GCN1Q92616 2671 aaKnown RBP7.47□□□□□ -1.21
RFC4-210ENST00000449502 ZNF727A8MUV8 499 aa7.47□□□□□ -1.21
RFC4-210ENST00000449502 M0R036 132 aa7.47□□□□□ -1.21
RFC4-210ENST00000449502 ZNF207O43670 478 aaKnown RBP7.47□□□□□ -1.21
RFC4-210ENST00000449502 NDUFA7O95182 113 aa7.47□□□□□ -1.21
RFC4-210ENST00000449502 SNAPINO95295 136 aa7.47□□□□□ -1.21
RFC4-210ENST00000449502 CD81P60033 236 aa7.47□□□□□ -1.21
RFC4-210ENST00000449502 RANP62826 216 aaKnown RBP7.47□□□□□ -1.21
RFC4-210ENST00000449502 FAM74A3Q4VXF1 159 aa7.47□□□□□ -1.21
RFC4-210ENST00000449502 C1orf194Q5T5A4 169 aa7.47□□□□□ -1.21
RFC4-210ENST00000449502 RNF152Q8N8N0 203 aa7.47□□□□□ -1.21
RFC4-210ENST00000449502 CMTM2Q8TAZ6 248 aa7.47□□□□□ -1.21
RFC4-210ENST00000449502 TMEM190Q8WZ59 177 aa7.47□□□□□ -1.21
RFC4-210ENST00000449502 RPUSD4Q96CM3 377 aaKnown RBP7.47□□□□□ -1.21
RFC4-210ENST00000449502 ZNF503Q96F45 646 aa7.47□□□□□ -1.21
RFC4-210ENST00000449502 NIPSNAP3BQ9BS92 247 aa7.47□□□□□ -1.21
RFC4-210ENST00000449502 ZFAND3Q9H8U3 227 aa7.47□□□□□ -1.21
RFC4-210ENST00000449502 CARHSP1Q9Y2V2 147 aaKnown RBP7.47□□□□□ -1.21
RFC4-210ENST00000449502 FASNP49327 2511 aaKnown RBP7.47□□□□□ -1.21
RFC4-210ENST00000449502 TNCP24821 2201 aa7.47□□□□□ -1.21
RFC4-210ENST00000449502 ABCA1O95477 2261 aa7.47□□□□□ -1.21
RFC4-210ENST00000449502 HECTD1Q9ULT8 2610 aa7.46□□□□□ -1.22
RFC4-210ENST00000449502 IGHV3-66A0A0C4DH42 116 aa7.46□□□□□ -1.22
RFC4-210ENST00000449502 PGPA6NDG6 321 aa7.46□□□□□ -1.22
RFC4-210ENST00000449502 M0QZ24 198 aa7.46□□□□□ -1.22
RFC4-210ENST00000449502 SLC25A5P05141 298 aaKnown RBP7.46□□□□□ -1.22
RFC4-210ENST00000449502 SNRPCP09234 159 aaKnown RBP7.46□□□□□ -1.22
RFC4-210ENST00000449502 GP9P14770 177 aa7.46□□□□□ -1.22
RFC4-210ENST00000449502 CDX1P47902 265 aaPredicted RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms