RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 CR1LQ2VPA4 569 aa15.49■□□□□ 0.07
HMGA1-205ENST00000447654 C1orf122Q6ZSJ8 110 aa15.49■□□□□ 0.07
HMGA1-205ENST00000447654 PRSS33Q8NF86 280 aa15.49■□□□□ 0.07
HMGA1-205ENST00000447654 PGLYRP4Q96LB8 373 aa15.49■□□□□ 0.07
HMGA1-205ENST00000447654 PRRG4Q9BZD6 226 aa15.49■□□□□ 0.07
HMGA1-205ENST00000447654 TMEM140Q9NV12 185 aa15.49■□□□□ 0.07
HMGA1-205ENST00000447654 B4GALT7Q9UBV7 327 aa15.49■□□□□ 0.07
HMGA1-205ENST00000447654 RIF1Q5UIP0 2472 aaKnown RBP15.49■□□□□ 0.07
HMGA1-205ENST00000447654 ZNF138P52744 262 aa15.49■□□□□ 0.07
HMGA1-205ENST00000447654 ZNF714Q96N38 554 aa15.49■□□□□ 0.07
HMGA1-205ENST00000447654 PRO0461Q9UI25 63 aa15.49■□□□□ 0.07
HMGA1-205ENST00000447654 HLA-DRB4P13762 266 aa15.48■□□□□ 0.07
HMGA1-205ENST00000447654 GCSHP23434 173 aa15.48■□□□□ 0.07
HMGA1-205ENST00000447654 MYCNOSP40205 109 aa15.48■□□□□ 0.07
HMGA1-205ENST00000447654 FXYD2P54710 66 aa15.48■□□□□ 0.07
HMGA1-205ENST00000447654 ACP7Q6ZNF0 438 aa15.48■□□□□ 0.07
HMGA1-205ENST00000447654 OR5AN1Q8NGI8 311 aa15.48■□□□□ 0.07
HMGA1-205ENST00000447654 TMEM14BQ9NUH8 114 aa15.48■□□□□ 0.07
HMGA1-205ENST00000447654 HLA-DRB4X5D2U9 266 aa15.48■□□□□ 0.07
HMGA1-205ENST00000447654 PTPRBP23467 1997 aa15.48■□□□□ 0.07
HMGA1-205ENST00000447654 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.48■□□□□ 0.07
HMGA1-205ENST00000447654 TCRBV4S1A1TA0A5B7 111 aa15.48■□□□□ 0.07
HMGA1-205ENST00000447654 FBLL1A6NHQ2 334 aaKnown RBP15.48■□□□□ 0.07
HMGA1-205ENST00000447654 IGLL5B9A064 214 aa15.48■□□□□ 0.07
HMGA1-205ENST00000447654 NPIPB6E9PJ23 425 aa15.48■□□□□ 0.07
HMGA1-205ENST00000447654 PRSS3P2Q8NHM4 247 aa15.48■□□□□ 0.07
HMGA1-205ENST00000447654 Q8TCH9 128 aa15.48■□□□□ 0.07
HMGA1-205ENST00000447654 COQ2Q96H96 371 aa15.48■□□□□ 0.07
HMGA1-205ENST00000447654 AKAP13Q12802 2813 aa15.47■□□□□ 0.07
HMGA1-205ENST00000447654 SLC25A17O43808 307 aa15.47■□□□□ 0.07
HMGA1-205ENST00000447654 TAL2Q16559 108 aa15.47■□□□□ 0.07
HMGA1-205ENST00000447654 ARPC1AQ92747 370 aa15.47■□□□□ 0.07
HMGA1-205ENST00000447654 DEFB127Q9H1M4 99 aa15.47■□□□□ 0.07
HMGA1-205ENST00000447654 CDIP1Q9H305 208 aa15.47■□□□□ 0.07
HMGA1-205ENST00000447654 NKX2-8O15522 239 aa15.46■□□□□ 0.07
HMGA1-205ENST00000447654 CD24P25063 80 aa15.46■□□□□ 0.07
HMGA1-205ENST00000447654 ATP5G2Q06055 141 aa15.46■□□□□ 0.07
HMGA1-205ENST00000447654 SH2D6Q7Z4S9 175 aa15.46■□□□□ 0.07
HMGA1-205ENST00000447654 RNF183Q96D59 192 aa15.46■□□□□ 0.07
HMGA1-205ENST00000447654 FMC1Q96HJ9 113 aa15.46■□□□□ 0.07
HMGA1-205ENST00000447654 PAXXQ9BUH6 204 aa15.46■□□□□ 0.07
HMGA1-205ENST00000447654 EPDR1Q9UM22 224 aa15.46■□□□□ 0.07
HMGA1-205ENST00000447654 ZFHX2Q9C0A1 2572 aaPredicted RBP15.46■□□□□ 0.07
HMGA1-205ENST00000447654 THBDP07204 575 aa15.46■□□□□ 0.07
HMGA1-205ENST00000447654 SLC25A48Q6ZT89 311 aaKnown RBP15.46■□□□□ 0.07
HMGA1-205ENST00000447654 PIP4P1Q86T03 277 aa15.46■□□□□ 0.07
HMGA1-205ENST00000447654 DEFB124Q8NES8 71 aa15.46■□□□□ 0.07
HMGA1-205ENST00000447654 OR1L4Q8NGR5 311 aa15.46■□□□□ 0.07
HMGA1-205ENST00000447654 DAZAP1Q96EP5 407 aaKnown RBP15.46■□□□□ 0.07
HMGA1-205ENST00000447654 ESPL1Q14674 2120 aa15.45■□□□□ 0.06
HMGA1-205ENST00000447654 HCFC1P51610 2035 aa15.45■□□□□ 0.06
HMGA1-205ENST00000447654 COL8A2P25067 703 aa15.45■□□□□ 0.06
HMGA1-205ENST00000447654 FOXI1Q12951 378 aa15.45■□□□□ 0.06
HMGA1-205ENST00000447654 PCP2Q8IVA1 136 aa15.45■□□□□ 0.06
HMGA1-205ENST00000447654 OR8A1Q8NGG7 326 aa15.45■□□□□ 0.06
HMGA1-205ENST00000447654 ZNF414Q96IQ9 312 aa15.45■□□□□ 0.06
HMGA1-205ENST00000447654 C18orf15Q96N68 181 aa15.45■□□□□ 0.06
HMGA1-205ENST00000447654 SS18L2Q9UHA2 77 aa15.45■□□□□ 0.06
HMGA1-205ENST00000447654 ZNF137PP52743 207 aa15.45■□□□□ 0.06
HMGA1-205ENST00000447654 RIGQ13278 110 aa15.45■□□□□ 0.06
HMGA1-205ENST00000447654 TMEM177Q53S58 311 aa15.45■□□□□ 0.06
HMGA1-205ENST00000447654 SHISA2Q6UWI4 295 aa15.45■□□□□ 0.06
HMGA1-205ENST00000447654 CEND1Q8N111 149 aa15.45■□□□□ 0.06
HMGA1-205ENST00000447654 TMEM116Q8NCL8 245 aa15.45■□□□□ 0.06
HMGA1-205ENST00000447654 CHAC1Q9BUX1 264 aa15.45■□□□□ 0.06
HMGA1-205ENST00000447654 C1QTNF4Q9BXJ3 329 aa15.45■□□□□ 0.06
HMGA1-205ENST00000447654 SPANXA1Q9NS26 97 aa15.45■□□□□ 0.06
HMGA1-205ENST00000447654 SPRR3Q9UBC9 169 aa15.45■□□□□ 0.06
HMGA1-205ENST00000447654 TET2Q6N021 2002 aaPredicted RBP15.44■□□□□ 0.06
HMGA1-205ENST00000447654 IGKV1OR2-108A0A075B7D4 117 aa15.44■□□□□ 0.06
HMGA1-205ENST00000447654 TRBV7-9A0A0J9YWB2 115 aa15.44■□□□□ 0.06
HMGA1-205ENST00000447654 LTAP01374 205 aa15.44■□□□□ 0.06
HMGA1-205ENST00000447654 CSN3P07498 182 aa15.44■□□□□ 0.06
HMGA1-205ENST00000447654 NMUP48645 174 aa15.44■□□□□ 0.06
HMGA1-205ENST00000447654 CACNG7P62955 275 aa15.44■□□□□ 0.06
HMGA1-205ENST00000447654 ASPHD1Q5U4P2 390 aa15.44■□□□□ 0.06
HMGA1-205ENST00000447654 S1PR3Q99500 378 aa15.44■□□□□ 0.06
HMGA1-205ENST00000447654 A0A096LNJ9 63 aa15.43■□□□□ 0.06
HMGA1-205ENST00000447654 TRAV3A0A0B4J244 114 aa15.43■□□□□ 0.06
HMGA1-205ENST00000447654 TNFRSF13BO14836 293 aaPredicted RBP15.43■□□□□ 0.06
HMGA1-205ENST00000447654 SPINT2O43291 252 aa15.43■□□□□ 0.06
HMGA1-205ENST00000447654 APOMO95445 188 aa15.43■□□□□ 0.06
HMGA1-205ENST00000447654 WT1P19544 449 aaPredicted RBP15.43■□□□□ 0.06
HMGA1-205ENST00000447654 PRR7Q8TB68 274 aa15.43■□□□□ 0.06
HMGA1-205ENST00000447654 KLF13Q9Y2Y9 288 aaPredicted RBP15.43■□□□□ 0.06
HMGA1-205ENST00000447654 PSPNO60542 156 aa15.43■□□□□ 0.06
HMGA1-205ENST00000447654 SPINK2P20155 84 aa15.43■□□□□ 0.06
HMGA1-205ENST00000447654 LINC00205P59089 165 aa15.43■□□□□ 0.06
HMGA1-205ENST00000447654 Q6ZUT4 128 aa15.43■□□□□ 0.06
HMGA1-205ENST00000447654 C12orf49Q9H741 205 aa15.43■□□□□ 0.06
HMGA1-205ENST00000447654 H3BMG7 143 aa15.42■□□□□ 0.06
HMGA1-205ENST00000447654 PLP2Q04941 152 aa15.42■□□□□ 0.06
HMGA1-205ENST00000447654 TCF15Q12870 199 aa15.42■□□□□ 0.06
HMGA1-205ENST00000447654 C2orf83Q53S99 150 aa15.42■□□□□ 0.06
HMGA1-205ENST00000447654 CACNG8Q8WXS5 425 aa15.42■□□□□ 0.06
HMGA1-205ENST00000447654 RAX2Q96IS3 184 aa15.42■□□□□ 0.06
HMGA1-205ENST00000447654 ANAPC13Q9BS18 74 aa15.42■□□□□ 0.06
HMGA1-205ENST00000447654 TIMM8BQ9Y5J9 83 aaPredicted RBP15.42■□□□□ 0.06
HMGA1-205ENST00000447654 DCHS1Q96JQ0 3298 aa15.42■□□□□ 0.06
HMGA1-205ENST00000447654 A0A1B0GUT8 65 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms