RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 C21orf62Q9NYP8 219 aa13.68□□□□□ -0.22
SMC6-206ENST00000446852 A0A0U1RQK1 487 aa13.68□□□□□ -0.22
SMC6-206ENST00000446852 IL4P05112 153 aa13.68□□□□□ -0.22
SMC6-206ENST00000446852 FOXL1Q12952 345 aa13.68□□□□□ -0.22
SMC6-206ENST00000446852 ECSCRQ19T08 205 aa13.68□□□□□ -0.22
SMC6-206ENST00000446852 C5orf56Q8N8D9 126 aa13.68□□□□□ -0.22
SMC6-206ENST00000446852 PIFOQ8TCI5 191 aa13.68□□□□□ -0.22
SMC6-206ENST00000446852 TMUB1Q9BVT8 246 aa13.68□□□□□ -0.22
SMC6-206ENST00000446852 CDC42EP3Q9UKI2 254 aa13.68□□□□□ -0.22
SMC6-206ENST00000446852 USP9YO00507 2555 aaPredicted RBP13.68□□□□□ -0.22
SMC6-206ENST00000446852 PTPN13Q12923 2485 aa13.68□□□□□ -0.22
SMC6-206ENST00000446852 LINC00518Q8N0U6 118 aa13.67□□□□□ -0.22
SMC6-206ENST00000446852 THYN1Q9P016 225 aa13.67□□□□□ -0.22
SMC6-206ENST00000446852 SOX21Q9Y651 276 aaPredicted RBP13.67□□□□□ -0.22
SMC6-206ENST00000446852 ZANQ9Y493 2812 aa13.67□□□□□ -0.22
SMC6-206ENST00000446852 WI2-2373I1.2A0A1W2PRP0 233 aa13.67□□□□□ -0.22
SMC6-206ENST00000446852 TYMSP04818 313 aa13.67□□□□□ -0.22
SMC6-206ENST00000446852 PAX1P15863 534 aa13.67□□□□□ -0.22
SMC6-206ENST00000446852 YPEL3P61236 119 aaPredicted RBP13.67□□□□□ -0.22
SMC6-206ENST00000446852 Q56UQ5 140 aa13.67□□□□□ -0.22
SMC6-206ENST00000446852 UNQ5815/PRO19632Q6UWF5 114 aa13.67□□□□□ -0.22
SMC6-206ENST00000446852 BCL6BQ8N143 479 aaPredicted RBP13.67□□□□□ -0.22
SMC6-206ENST00000446852 NHLRC2Q8NBF2 726 aa13.67□□□□□ -0.22
SMC6-206ENST00000446852 FAM110DQ8TAY7 271 aaPredicted RBP13.67□□□□□ -0.22
SMC6-206ENST00000446852 SHANK2-AS3Q9BTD1 123 aa13.67□□□□□ -0.22
SMC6-206ENST00000446852 TRAV30A0A087WSZ9 112 aa13.66□□□□□ -0.22
SMC6-206ENST00000446852 TRAV34A0A0B4J273 112 aa13.66□□□□□ -0.22
SMC6-206ENST00000446852 PGPA6NDG6 321 aa13.66□□□□□ -0.22
SMC6-206ENST00000446852 H3BRN7 92 aa13.66□□□□□ -0.22
SMC6-206ENST00000446852 NDUFA6P56556 154 aa13.66□□□□□ -0.22
SMC6-206ENST00000446852 ERVFC1-1P60608 527 aa13.66□□□□□ -0.22
SMC6-206ENST00000446852 ABCA12Q86UK0 2595 aa13.66□□□□□ -0.22
SMC6-206ENST00000446852 TMEM14CQ9P0S9 112 aa13.66□□□□□ -0.22
SMC6-206ENST00000446852 FBXL7Q9UJT9 491 aa13.66□□□□□ -0.22
SMC6-206ENST00000446852 V9GYV3 84 aa13.66□□□□□ -0.22
SMC6-206ENST00000446852 ISLRO14498 428 aa13.66□□□□□ -0.22
SMC6-206ENST00000446852 SLC25A5P05141 298 aaKnown RBP13.66□□□□□ -0.22
SMC6-206ENST00000446852 CNN1P51911 297 aaKnown RBP13.66□□□□□ -0.22
SMC6-206ENST00000446852 TAS2R60P59551 318 aa13.66□□□□□ -0.22
SMC6-206ENST00000446852 USF2Q15853 346 aaPredicted RBP13.66□□□□□ -0.22
SMC6-206ENST00000446852 RNASE7Q9H1E1 156 aaKnown RBP13.66□□□□□ -0.22
SMC6-206ENST00000446852 C7orf69Q9H7B7 122 aa13.66□□□□□ -0.22
SMC6-206ENST00000446852 ZNF586Q9NXT0 402 aa13.66□□□□□ -0.22
SMC6-206ENST00000446852 EPDR1Q9UM22 224 aa13.66□□□□□ -0.22
SMC6-206ENST00000446852 G3V318 75 aa13.65□□□□□ -0.22
SMC6-206ENST00000446852 GCGP01275 180 aa13.65□□□□□ -0.22
SMC6-206ENST00000446852 TCEAL7Q9BRU2 100 aa13.65□□□□□ -0.22
SMC6-206ENST00000446852 OR2T8A6NH00 312 aa13.65□□□□□ -0.22
SMC6-206ENST00000446852 AMY1AP04745 511 aa13.65□□□□□ -0.22
SMC6-206ENST00000446852 Q9H3A6 140 aa13.65□□□□□ -0.22
SMC6-206ENST00000446852 IL36BQ9NZH7 164 aa13.65□□□□□ -0.22
SMC6-206ENST00000446852 DSCR9P59020 149 aa13.64□□□□□ -0.23
SMC6-206ENST00000446852 MEGF9Q9H1U4 602 aa13.64□□□□□ -0.23
SMC6-206ENST00000446852 ZNF320A2RRD8 509 aa13.64□□□□□ -0.23
SMC6-206ENST00000446852 CTSGP08311 255 aa13.64□□□□□ -0.23
SMC6-206ENST00000446852 MGST1P10620 155 aaKnown RBP13.64□□□□□ -0.23
SMC6-206ENST00000446852 HOXA5P20719 270 aa13.64□□□□□ -0.23
SMC6-206ENST00000446852 HIF1ANQ9NWT6 349 aa13.64□□□□□ -0.23
SMC6-206ENST00000446852 MOB4Q9Y3A3 225 aa13.64□□□□□ -0.23
SMC6-206ENST00000446852 AVPP01185 164 aa13.63□□□□□ -0.23
SMC6-206ENST00000446852 HIST1H1EP10412 219 aaKnown RBP13.63□□□□□ -0.23
SMC6-206ENST00000446852 KLK9Q2XQG4 91 aa13.63□□□□□ -0.23
SMC6-206ENST00000446852 ACTL10Q5JWF8 245 aa13.63□□□□□ -0.23
SMC6-206ENST00000446852 TMEM68Q96MH6 324 aa13.63□□□□□ -0.23
SMC6-206ENST00000446852 CHRDL1Q9BU40 450 aa13.63□□□□□ -0.23
SMC6-206ENST00000446852 KLK9Q9UKQ9 250 aa13.63□□□□□ -0.23
SMC6-206ENST00000446852 RPH3ALQ9UNE2 315 aa13.63□□□□□ -0.23
SMC6-206ENST00000446852 B4DSR2 109 aa13.63□□□□□ -0.23
SMC6-206ENST00000446852 HIST1H1BP16401 226 aaKnown RBP13.63□□□□□ -0.23
SMC6-206ENST00000446852 ADMP35318 185 aa13.63□□□□□ -0.23
SMC6-206ENST00000446852 C15orf32Q32M92 178 aa13.63□□□□□ -0.23
SMC6-206ENST00000446852 C5orf17Q8NAS9 161 aa13.63□□□□□ -0.23
SMC6-206ENST00000446852 SGK494Q96LW2 274 aa13.63□□□□□ -0.23
SMC6-206ENST00000446852 OSTCQ9NRP0 149 aa13.63□□□□□ -0.23
SMC6-206ENST00000446852 CSPG4Q6UVK1 2322 aa13.62□□□□□ -0.23
SMC6-206ENST00000446852 IFITM10A6NMD0 228 aa13.62□□□□□ -0.23
SMC6-206ENST00000446852 IGLC2P0DOY2 106 aa13.62□□□□□ -0.23
SMC6-206ENST00000446852 FCGR2BP31994 310 aaPredicted RBP13.62□□□□□ -0.23
SMC6-206ENST00000446852 RHOGP84095 191 aa13.62□□□□□ -0.23
SMC6-206ENST00000446852 TMEM183BQ1AE95 376 aa13.62□□□□□ -0.23
SMC6-206ENST00000446852 CHD6Q8TD26 2715 aa13.62□□□□□ -0.23
SMC6-206ENST00000446852 A0A096LNT2 108 aa13.62□□□□□ -0.23
SMC6-206ENST00000446852 TRBV9A0A0B4J1U6 114 aa13.62□□□□□ -0.23
SMC6-206ENST00000446852 MRPS12O15235 138 aaKnown RBP13.62□□□□□ -0.23
SMC6-206ENST00000446852 RPL15P61313 204 aaKnown RBP13.62□□□□□ -0.23
SMC6-206ENST00000446852 GFI1BQ5VTD9 330 aa13.62□□□□□ -0.23
SMC6-206ENST00000446852 BAGE2Q86Y30 109 aa13.62□□□□□ -0.23
SMC6-206ENST00000446852 BPIFA4PQ86YQ2 179 aa13.62□□□□□ -0.23
SMC6-206ENST00000446852 VN1R17PQ8TDU5 208 aa13.62□□□□□ -0.23
SMC6-206ENST00000446852 ZNF414Q96IQ9 312 aa13.62□□□□□ -0.23
SMC6-206ENST00000446852 C17orf77Q96MU5 243 aa13.62□□□□□ -0.23
SMC6-206ENST00000446852 ATG101Q9BSB4 218 aa13.62□□□□□ -0.23
SMC6-206ENST00000446852 KLF12Q9Y4X4 402 aa13.62□□□□□ -0.23
SMC6-206ENST00000446852 TENM4Q6N022 2769 aa13.61□□□□□ -0.23
SMC6-206ENST00000446852 ZNF98A6NK75 572 aa13.61□□□□□ -0.23
SMC6-206ENST00000446852 SLC25A16P16260 332 aa13.61□□□□□ -0.23
SMC6-206ENST00000446852 COL8A1P27658 744 aa13.61□□□□□ -0.23
SMC6-206ENST00000446852 KRTAP10-9P60411 292 aa13.61□□□□□ -0.23
SMC6-206ENST00000446852 IBA57Q5T440 356 aaKnown RBP13.61□□□□□ -0.23
SMC6-206ENST00000446852 EXOC3-AS1Q8N2X6 119 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms