RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 RER1O15258 196 aa2.34□□□□□ -2.03
LINC00440-201ENST00000446579 MT-ND6P03923 174 aa2.34□□□□□ -2.03
LINC00440-201ENST00000446579 SCTP09683 121 aa2.34□□□□□ -2.03
LINC00440-201ENST00000446579 UBBP0CG47 229 aa2.34□□□□□ -2.03
LINC00440-201ENST00000446579 SDC4P31431 198 aa2.34□□□□□ -2.03
LINC00440-201ENST00000446579 RPL26P61254 145 aaKnown RBP2.34□□□□□ -2.03
LINC00440-201ENST00000446579 VMA21Q3ZAQ7 101 aa2.34□□□□□ -2.03
LINC00440-201ENST00000446579 Q6ZQT0 140 aa2.34□□□□□ -2.03
LINC00440-201ENST00000446579 PHF5AQ7RTV0 110 aaKnown RBP2.34□□□□□ -2.03
LINC00440-201ENST00000446579 TAS2R4Q9NYW5 299 aa2.34□□□□□ -2.03
LINC00440-201ENST00000446579 CALML5Q9NZT1 146 aa2.34□□□□□ -2.03
LINC00440-201ENST00000446579 RPL26L1Q9UNX3 145 aaKnown RBP2.34□□□□□ -2.03
LINC00440-201ENST00000446579 CCL26Q9Y258 94 aa2.34□□□□□ -2.03
LINC00440-201ENST00000446579 RIC1Q4ADV7 1423 aa2.34□□□□□ -2.04
LINC00440-201ENST00000446579 PRR14LQ5THK1 2151 aa2.33□□□□□ -2.04
LINC00440-201ENST00000446579 SHROOM3Q8TF72 1996 aa2.33□□□□□ -2.04
LINC00440-201ENST00000446579 TRAV13-1A0A0B4J241 112 aa2.33□□□□□ -2.04
LINC00440-201ENST00000446579 J3QR89 54 aa2.33□□□□□ -2.04
LINC00440-201ENST00000446579 M0R2Z0 102 aa2.33□□□□□ -2.04
LINC00440-201ENST00000446579 TIMM17BO60830 172 aa2.33□□□□□ -2.04
LINC00440-201ENST00000446579 OR2H2O95918 312 aa2.33□□□□□ -2.04
LINC00440-201ENST00000446579 PAEPP09466 180 aa2.33□□□□□ -2.04
LINC00440-201ENST00000446579 MPC1LP0DKB6 136 aa2.33□□□□□ -2.04
LINC00440-201ENST00000446579 PEBP1P30086 187 aaKnown RBP2.33□□□□□ -2.04
LINC00440-201ENST00000446579 SLC38A11Q08AI6 406 aa2.33□□□□□ -2.04
LINC00440-201ENST00000446579 ZNF345Q14585 488 aa2.33□□□□□ -2.04
LINC00440-201ENST00000446579 TAF9Q16594 264 aa2.33□□□□□ -2.04
LINC00440-201ENST00000446579 SPANXN5Q5MJ07 72 aa2.33□□□□□ -2.04
LINC00440-201ENST00000446579 RNASE11Q8TAA1 199 aaKnown RBP2.33□□□□□ -2.04
LINC00440-201ENST00000446579 VPS25Q9BRG1 176 aa2.33□□□□□ -2.04
LINC00440-201ENST00000446579 LINC00467Q9BRT7 94 aa2.33□□□□□ -2.04
LINC00440-201ENST00000446579 TRPM3Q9HCF6 1732 aaPredicted RBP2.33□□□□□ -2.04
LINC00440-201ENST00000446579 DOCK6Q96HP0 2047 aa2.32□□□□□ -2.04
LINC00440-201ENST00000446579 MGST1P10620 155 aaKnown RBP2.32□□□□□ -2.04
LINC00440-201ENST00000446579 AQP4P55087 323 aa2.32□□□□□ -2.04
LINC00440-201ENST00000446579 NNATQ16517 81 aa2.32□□□□□ -2.04
LINC00440-201ENST00000446579 ESRGQ1W209 222 aa2.32□□□□□ -2.04
LINC00440-201ENST00000446579 KRTAP5-7Q6L8G8 165 aa2.32□□□□□ -2.04
LINC00440-201ENST00000446579 HCP5Q6MZN7 132 aa2.32□□□□□ -2.04
LINC00440-201ENST00000446579 Q6ZTI0 123 aa2.32□□□□□ -2.04
LINC00440-201ENST00000446579 OR8J3Q8NGG0 315 aa2.32□□□□□ -2.04
LINC00440-201ENST00000446579 OR51A4Q8NGJ6 313 aa2.32□□□□□ -2.04
LINC00440-201ENST00000446579 OR5H6Q8NGV6 325 aa2.32□□□□□ -2.04
LINC00440-201ENST00000446579 ZC2HC1AQ96GY0 325 aa2.32□□□□□ -2.04
LINC00440-201ENST00000446579 C20orf166-AS1Q96NR2 134 aa2.32□□□□□ -2.04
LINC00440-201ENST00000446579 LY96Q9Y6Y9 160 aa2.32□□□□□ -2.04
LINC00440-201ENST00000446579 CAMSAP2Q08AD1 1489 aa2.32□□□□□ -2.04
LINC00440-201ENST00000446579 DCAF1Q9Y4B6 1507 aa2.32□□□□□ -2.04
LINC00440-201ENST00000446579 MED1Q15648 1581 aaPredicted RBP2.32□□□□□ -2.04
LINC00440-201ENST00000446579 SIPA1L1O43166 1804 aa2.31□□□□□ -2.04
LINC00440-201ENST00000446579 K7ERJ3 54 aa2.31□□□□□ -2.04
LINC00440-201ENST00000446579 NDUFA2O43678 99 aa2.31□□□□□ -2.04
LINC00440-201ENST00000446579 PROSCO94903 275 aa2.31□□□□□ -2.04
LINC00440-201ENST00000446579 CSRP1P21291 193 aaKnown RBP2.31□□□□□ -2.04
LINC00440-201ENST00000446579 LSM3P62310 102 aaKnown RBP2.31□□□□□ -2.04
LINC00440-201ENST00000446579 HIST1H1AQ02539 215 aaPredicted RBP2.31□□□□□ -2.04
LINC00440-201ENST00000446579 TEX29Q8N6K0 151 aa2.31□□□□□ -2.04
LINC00440-201ENST00000446579 C3orf56Q8N813 242 aa2.31□□□□□ -2.04
LINC00440-201ENST00000446579 TSTD1Q8NFU3 115 aa2.31□□□□□ -2.04
LINC00440-201ENST00000446579 OR4B1Q8NGF8 309 aa2.31□□□□□ -2.04
LINC00440-201ENST00000446579 OR2T35Q8NGX2 323 aa2.31□□□□□ -2.04
LINC00440-201ENST00000446579 ZNF418Q8TF45 676 aaPredicted RBP2.31□□□□□ -2.04
LINC00440-201ENST00000446579 BRK1Q8WUW1 75 aa2.31□□□□□ -2.04
LINC00440-201ENST00000446579 CHCHD1Q96BP2 118 aaKnown RBP2.31□□□□□ -2.04
LINC00440-201ENST00000446579 SHANK3Q9BYB0 1731 aa2.31□□□□□ -2.04
LINC00440-201ENST00000446579 ZSWIM8A7E2V4 1837 aa2.31□□□□□ -2.04
LINC00440-201ENST00000446579 TRIOBPQ9H2D6 2365 aa2.3□□□□□ -2.04
LINC00440-201ENST00000446579 LOC107984640A0A0U1RRK4 108 aa2.3□□□□□ -2.04
LINC00440-201ENST00000446579 SDHAF1A6NFY7 115 aa2.3□□□□□ -2.04
LINC00440-201ENST00000446579 SULT1C4O75897 302 aa2.3□□□□□ -2.04
LINC00440-201ENST00000446579 CTSDP07339 412 aaPredicted RBP2.3□□□□□ -2.04
LINC00440-201ENST00000446579 BAALC-AS2P0C853 105 aa2.3□□□□□ -2.04
LINC00440-201ENST00000446579 EVI2AP22794 236 aa2.3□□□□□ -2.04
LINC00440-201ENST00000446579 MRPS36P82909 103 aaKnown RBP2.3□□□□□ -2.04
LINC00440-201ENST00000446579 KLRD1Q13241 179 aa2.3□□□□□ -2.04
LINC00440-201ENST00000446579 MORN2Q502X0 79 aa2.3□□□□□ -2.04
LINC00440-201ENST00000446579 TMEM244Q5VVB8 128 aa2.3□□□□□ -2.04
LINC00440-201ENST00000446579 MAGOHBQ96A72 148 aaKnown RBP2.3□□□□□ -2.04
LINC00440-201ENST00000446579 PRELID3AQ96N28 172 aa2.3□□□□□ -2.04
LINC00440-201ENST00000446579 MCEEQ96PE7 176 aa2.3□□□□□ -2.04
LINC00440-201ENST00000446579 SMIM3Q9BZL3 60 aa2.3□□□□□ -2.04
LINC00440-201ENST00000446579 CST9LQ9H4G1 147 aa2.3□□□□□ -2.04
LINC00440-201ENST00000446579 TPT1P8Q9HAU6 139 aa2.3□□□□□ -2.04
LINC00440-201ENST00000446579 CBLN4Q9NTU7 201 aa2.3□□□□□ -2.04
LINC00440-201ENST00000446579 U3KQ87 197 aa2.3□□□□□ -2.04
LINC00440-201ENST00000446579 OVOS2A0A0G2JMS6 1433 aa2.3□□□□□ -2.04
LINC00440-201ENST00000446579 KIF1BO60333 1816 aa2.3□□□□□ -2.04
LINC00440-201ENST00000446579 A2MP01023 1474 aa2.29□□□□□ -2.04
LINC00440-201ENST00000446579 MED23Q9ULK4 1368 aa2.29□□□□□ -2.04
LINC00440-201ENST00000446579 CCDC171Q6TFL3 1326 aa2.29□□□□□ -2.04
LINC00440-201ENST00000446579 IGKV3D-11A0A0A0MRZ8 115 aa2.29□□□□□ -2.04
LINC00440-201ENST00000446579 TRAV3A0A0B4J244 114 aa2.29□□□□□ -2.04
LINC00440-201ENST00000446579 TRBV7-6A0A0J9YX20 115 aa2.29□□□□□ -2.04
LINC00440-201ENST00000446579 TRBV27A0A0K0K1C4 114 aa2.29□□□□□ -2.04
LINC00440-201ENST00000446579 A0A1B0GW64 132 aa2.29□□□□□ -2.04
LINC00440-201ENST00000446579 C5orf58C9J3I9 102 aa2.29□□□□□ -2.04
LINC00440-201ENST00000446579 LYRM1O43325 122 aa2.29□□□□□ -2.04
LINC00440-201ENST00000446579 MT-ND4LP03901 98 aa2.29□□□□□ -2.04
LINC00440-201ENST00000446579 SHBGP04278 402 aa2.29□□□□□ -2.04
LINC00440-201ENST00000446579 RPL22P35268 128 aaKnown RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms