RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 TRGV5A0A0B4J1U4 118 aa11.21□□□□□ -0.61
VPS52-212ENST00000445902 POU2AF1Q16633 256 aa11.21□□□□□ -0.61
VPS52-212ENST00000445902 PEAR1Q5VY43 1037 aaPredicted RBP11.21□□□□□ -0.61
VPS52-212ENST00000445902 GTSF1LQ9H1H1 148 aa11.21□□□□□ -0.61
VPS52-212ENST00000445902 SPRY3O43610 288 aa11.21□□□□□ -0.62
VPS52-212ENST00000445902 IFI27P40305 119 aaPredicted RBP11.21□□□□□ -0.62
VPS52-212ENST00000445902 NMUP48645 174 aa11.21□□□□□ -0.62
VPS52-212ENST00000445902 JKAMPQ9P055 326 aa11.21□□□□□ -0.62
VPS52-212ENST00000445902 BOD1L1Q8NFC6 3051 aa11.21□□□□□ -0.62
VPS52-212ENST00000445902 LTAP01374 205 aa11.2□□□□□ -0.62
VPS52-212ENST00000445902 CGB3P0DN86 165 aa11.2□□□□□ -0.62
VPS52-212ENST00000445902 CGB7P0DN87 165 aa11.2□□□□□ -0.62
VPS52-212ENST00000445902 NEGR1Q7Z3B1 354 aa11.2□□□□□ -0.62
VPS52-212ENST00000445902 WFDC3Q8IUB2 231 aa11.2□□□□□ -0.62
VPS52-212ENST00000445902 Q9H3A6 140 aa11.2□□□□□ -0.62
VPS52-212ENST00000445902 KALRNO60229 2985 aa11.2□□□□□ -0.62
VPS52-212ENST00000445902 TCRAP04437 139 aa11.2□□□□□ -0.62
VPS52-212ENST00000445902 CFHR2P36980 270 aa11.2□□□□□ -0.62
VPS52-212ENST00000445902 CACNG7P62955 275 aa11.2□□□□□ -0.62
VPS52-212ENST00000445902 RBPJQ06330 500 aa11.2□□□□□ -0.62
VPS52-212ENST00000445902 CR1LQ2VPA4 569 aa11.2□□□□□ -0.62
VPS52-212ENST00000445902 PCP2Q8IVA1 136 aa11.2□□□□□ -0.62
VPS52-212ENST00000445902 CACNG8Q8WXS5 425 aa11.2□□□□□ -0.62
VPS52-212ENST00000445902 MRPL20Q9BYC9 149 aaKnown RBP11.2□□□□□ -0.62
VPS52-212ENST00000445902 NPFFR1Q9GZQ6 430 aa11.2□□□□□ -0.62
VPS52-212ENST00000445902 NDUFA4L2Q9NRX3 87 aa11.2□□□□□ -0.62
VPS52-212ENST00000445902 KLF12Q9Y4X4 402 aa11.2□□□□□ -0.62
VPS52-212ENST00000445902 IGKV3-15P01624 115 aa11.19□□□□□ -0.62
VPS52-212ENST00000445902 Q5PR19 223 aa11.19□□□□□ -0.62
VPS52-212ENST00000445902 MAFAQ8NHW3 353 aaPredicted RBP11.19□□□□□ -0.62
VPS52-212ENST00000445902 VSTM2AQ8TAG5 236 aa11.19□□□□□ -0.62
VPS52-212ENST00000445902 SRSF12Q8WXF0 261 aaKnown RBP11.19□□□□□ -0.62
VPS52-212ENST00000445902 SOX21Q9Y651 276 aaPredicted RBP11.19□□□□□ -0.62
VPS52-212ENST00000445902 ZDBF2Q9HCK1 2354 aa11.19□□□□□ -0.62
VPS52-212ENST00000445902 A1L4Q6 167 aa11.19□□□□□ -0.62
VPS52-212ENST00000445902 CSN1S1P47710 185 aa11.19□□□□□ -0.62
VPS52-212ENST00000445902 SMAGPQ0VAQ4 97 aa11.19□□□□□ -0.62
VPS52-212ENST00000445902 HCP5Q6MZN7 132 aa11.19□□□□□ -0.62
VPS52-212ENST00000445902 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.19□□□□□ -0.62
VPS52-212ENST00000445902 TEX48A0A1B0GUV7 120 aa11.19□□□□□ -0.62
VPS52-212ENST00000445902 A0A1W2PPM0 123 aa11.19□□□□□ -0.62
VPS52-212ENST00000445902 C22orf46C9J442 243 aa11.19□□□□□ -0.62
VPS52-212ENST00000445902 GOLT1AQ6ZVE7 132 aa11.19□□□□□ -0.62
VPS52-212ENST00000445902 EXOC3-AS1Q8N2X6 119 aa11.19□□□□□ -0.62
VPS52-212ENST00000445902 FAM216BQ8N7L0 139 aa11.19□□□□□ -0.62
VPS52-212ENST00000445902 FMC1Q96HJ9 113 aa11.19□□□□□ -0.62
VPS52-212ENST00000445902 KLRC4-KLRK1H3BQV0 150 aa11.18□□□□□ -0.62
VPS52-212ENST00000445902 GUCD1Q96NT3 240 aa11.18□□□□□ -0.62
VPS52-212ENST00000445902 CCL13Q99616 98 aa11.18□□□□□ -0.62
VPS52-212ENST00000445902 SERTM2A0A1B0GWG4 89 aa11.18□□□□□ -0.62
VPS52-212ENST00000445902 K7EMI3 77 aa11.18□□□□□ -0.62
VPS52-212ENST00000445902 PPIAL4GP0DN37 164 aa11.18□□□□□ -0.62
VPS52-212ENST00000445902 CT83Q5H943 113 aa11.18□□□□□ -0.62
VPS52-212ENST00000445902 ATP1A1-AS1Q5TC04 95 aa11.18□□□□□ -0.62
VPS52-212ENST00000445902 Q6ZT83 130 aa11.18□□□□□ -0.62
VPS52-212ENST00000445902 SSUH2Q9Y2M2 353 aa11.18□□□□□ -0.62
VPS52-212ENST00000445902 A0A096LNJ9 63 aa11.17□□□□□ -0.62
VPS52-212ENST00000445902 PPIAL4CA0A0B4J2A2 164 aa11.17□□□□□ -0.62
VPS52-212ENST00000445902 CGB1A6NKQ9 187 aa11.17□□□□□ -0.62
VPS52-212ENST00000445902 SMAD7O15105 426 aaKnown RBP11.17□□□□□ -0.62
VPS52-212ENST00000445902 PMS2CLQ68D20 193 aa11.17□□□□□ -0.62
VPS52-212ENST00000445902 Q86TA4 180 aa11.17□□□□□ -0.62
VPS52-212ENST00000445902 CLUHP3Q96NS8 147 aa11.17□□□□□ -0.62
VPS52-212ENST00000445902 ZNF492Q9P255 531 aa11.17□□□□□ -0.62
VPS52-212ENST00000445902 INSIG2Q9Y5U4 225 aa11.17□□□□□ -0.62
VPS52-212ENST00000445902 A0A1B0GUT8 65 aa11.17□□□□□ -0.62
VPS52-212ENST00000445902 HAX1O00165 279 aa11.17□□□□□ -0.62
VPS52-212ENST00000445902 AZU1P20160 251 aa11.17□□□□□ -0.62
VPS52-212ENST00000445902 DIAPH2-AS1Q14236 149 aa11.17□□□□□ -0.62
VPS52-212ENST00000445902 BOD1L2Q8IYS8 172 aa11.17□□□□□ -0.62
VPS52-212ENST00000445902 TTTY13Q9BZ97 58 aa11.17□□□□□ -0.62
VPS52-212ENST00000445902 NCOR1O75376 2440 aa11.17□□□□□ -0.62
VPS52-212ENST00000445902 IGHV1-18A0A0C4DH31 117 aa11.16□□□□□ -0.62
VPS52-212ENST00000445902 K7ERJ3 54 aa11.16□□□□□ -0.62
VPS52-212ENST00000445902 HSD52Q0P140 79 aa11.16□□□□□ -0.62
VPS52-212ENST00000445902 GFRA4Q9GZZ7 299 aa11.16□□□□□ -0.62
VPS52-212ENST00000445902 ADAMTSL5Q6ZMM2 481 aa11.16□□□□□ -0.62
VPS52-212ENST00000445902 UBALD2Q8IYN6 164 aa11.16□□□□□ -0.62
VPS52-212ENST00000445902 OR5AN1Q8NGI8 311 aa11.16□□□□□ -0.62
VPS52-212ENST00000445902 TPSG1Q9NRR2 321 aa11.16□□□□□ -0.62
VPS52-212ENST00000445902 TMSB15BA0A087X1C1 80 aa11.16□□□□□ -0.62
VPS52-212ENST00000445902 FCGR2BP31994 310 aaPredicted RBP11.16□□□□□ -0.62
VPS52-212ENST00000445902 LPAL2Q16609 132 aa11.16□□□□□ -0.62
VPS52-212ENST00000445902 ZADH2Q8N4Q0 377 aa11.16□□□□□ -0.62
VPS52-212ENST00000445902 C9orf172C9J069 976 aa11.15□□□□□ -0.62
VPS52-212ENST00000445902 D6R8Y8 96 aa11.15□□□□□ -0.62
VPS52-212ENST00000445902 FABP2P12104 132 aa11.15□□□□□ -0.62
VPS52-212ENST00000445902 GCSHP23434 173 aa11.15□□□□□ -0.62
VPS52-212ENST00000445902 TIMM23BQ5SRD1 257 aa11.15□□□□□ -0.62
VPS52-212ENST00000445902 GP9P14770 177 aa11.15□□□□□ -0.62
VPS52-212ENST00000445902 SAMD5Q5TGI4 173 aa11.15□□□□□ -0.62
VPS52-212ENST00000445902 SLC25A48Q6ZT89 311 aaKnown RBP11.15□□□□□ -0.62
VPS52-212ENST00000445902 DMXL2Q8TDJ6 3036 aa11.14□□□□□ -0.63
VPS52-212ENST00000445902 OVOL3O00110 214 aa11.14□□□□□ -0.63
VPS52-212ENST00000445902 NKX2-8O15522 239 aa11.14□□□□□ -0.63
VPS52-212ENST00000445902 ATP5IP56385 69 aaPredicted RBP11.14□□□□□ -0.63
VPS52-212ENST00000445902 TMEM108Q6UXF1 575 aa11.14□□□□□ -0.63
VPS52-212ENST00000445902 MDS2Q8NDY4 140 aa11.14□□□□□ -0.63
VPS52-212ENST00000445902 ABHD17AQ96GS6 310 aa11.14□□□□□ -0.63
VPS52-212ENST00000445902 SIGLEC8Q9NYZ4 499 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms