RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 SEM1Q6ZVN7 128 aa8.65□□□□□ -1.02
TOP3B-210ENST00000444502 DYNLRB2Q8TF09 96 aa8.65□□□□□ -1.02
TOP3B-210ENST00000444502 FN1P02751 2386 aaKnown RBP8.65□□□□□ -1.03
TOP3B-210ENST00000444502 C2CD3Q4AC94 2353 aa8.65□□□□□ -1.03
TOP3B-210ENST00000444502 CGAP01215 116 aa8.65□□□□□ -1.03
TOP3B-210ENST00000444502 PAX1P15863 534 aa8.65□□□□□ -1.03
TOP3B-210ENST00000444502 CAMPP49913 170 aa8.65□□□□□ -1.03
TOP3B-210ENST00000444502 RNF223E7ERA6 249 aa8.64□□□□□ -1.03
TOP3B-210ENST00000444502 TMEM250H0YL14 139 aa8.64□□□□□ -1.03
TOP3B-210ENST00000444502 RBFOX2O43251 390 aaKnown RBP eCLIP8.64□□□□□ -1.037e-8■■□□□ 13
TOP3B-210ENST00000444502 COA6Q5JTJ3 125 aaKnown RBP8.64□□□□□ -1.03
TOP3B-210ENST00000444502 CFAP161Q6P656 301 aa8.64□□□□□ -1.03
TOP3B-210ENST00000444502 HAPLN4Q86UW8 402 aa8.64□□□□□ -1.03
TOP3B-210ENST00000444502 KIR3DL3Q8N743 410 aa8.64□□□□□ -1.03
TOP3B-210ENST00000444502 MBD3L1Q8WWY6 194 aa8.64□□□□□ -1.03
TOP3B-210ENST00000444502 GAFA1Q96PS6 74 aa8.64□□□□□ -1.03
TOP3B-210ENST00000444502 MYO15AQ9UKN7 3530 aa8.64□□□□□ -1.03
TOP3B-210ENST00000444502 A0A1W2PRX2 142 aa8.64□□□□□ -1.03
TOP3B-210ENST00000444502 H3BUT2 72 aa8.64□□□□□ -1.03
TOP3B-210ENST00000444502 ISLRO14498 428 aa8.64□□□□□ -1.03
TOP3B-210ENST00000444502 TRGV3P03979 118 aa8.64□□□□□ -1.03
TOP3B-210ENST00000444502 GCHFRP30047 84 aa8.64□□□□□ -1.03
TOP3B-210ENST00000444502 CKS1BP61024 79 aa8.64□□□□□ -1.03
TOP3B-210ENST00000444502 NRGNQ92686 78 aa8.64□□□□□ -1.03
TOP3B-210ENST00000444502 PEF1Q9UBV8 284 aaKnown RBP8.64□□□□□ -1.03
TOP3B-210ENST00000444502 WDR83OSQ9Y284 106 aa8.64□□□□□ -1.03
TOP3B-210ENST00000444502 C3orf79P0CE67 100 aa8.64□□□□□ -1.03
TOP3B-210ENST00000444502 IGHV1-8P0DP01 117 aa8.64□□□□□ -1.03
TOP3B-210ENST00000444502 DOPEY1Q5JWR5 2465 aa8.64□□□□□ -1.03
TOP3B-210ENST00000444502 WDFY4Q6ZS81 3184 aa8.63□□□□□ -1.03
TOP3B-210ENST00000444502 IGHV2-26A0A0B4J1V2 119 aa8.63□□□□□ -1.03
TOP3B-210ENST00000444502 SCO2A0A1W2PP80 73 aa8.63□□□□□ -1.03
TOP3B-210ENST00000444502 SLC25A34Q6PIV7 304 aa8.63□□□□□ -1.03
TOP3B-210ENST00000444502 TREML4Q6UXN2 200 aa8.63□□□□□ -1.03
TOP3B-210ENST00000444502 C12orf54Q6X4T0 127 aa8.63□□□□□ -1.03
TOP3B-210ENST00000444502 PQLC2Q6ZP29 291 aa8.63□□□□□ -1.03
TOP3B-210ENST00000444502 MIR17HGQ75NE6 70 aa8.63□□□□□ -1.03
TOP3B-210ENST00000444502 PMCHL2Q9BQD1 86 aa8.63□□□□□ -1.03
TOP3B-210ENST00000444502 HIGD1AQ9Y241 93 aa8.63□□□□□ -1.03
TOP3B-210ENST00000444502 TNRC6AQ8NDV7 1962 aaKnown RBP8.63□□□□□ -1.03
TOP3B-210ENST00000444502 IL4P05112 153 aa8.63□□□□□ -1.03
TOP3B-210ENST00000444502 PSG9Q00887 426 aa8.63□□□□□ -1.03
TOP3B-210ENST00000444502 PAX2Q02962 417 aa8.63□□□□□ -1.03
TOP3B-210ENST00000444502 RPEL1Q2QD12 228 aa8.63□□□□□ -1.03
TOP3B-210ENST00000444502 PAXXQ9BUH6 204 aa8.63□□□□□ -1.03
TOP3B-210ENST00000444502 C15orf61A6NNL5 157 aa8.63□□□□□ -1.03
TOP3B-210ENST00000444502 C15orf62A8K5M9 175 aa8.63□□□□□ -1.03
TOP3B-210ENST00000444502 J3QKU1 62 aa8.63□□□□□ -1.03
TOP3B-210ENST00000444502 ZNF134P52741 427 aa8.63□□□□□ -1.03
TOP3B-210ENST00000444502 MLANAQ16655 118 aa8.63□□□□□ -1.03
TOP3B-210ENST00000444502 TMEM30BQ3MIR4 351 aa8.63□□□□□ -1.03
TOP3B-210ENST00000444502 Q71RC1 249 aaPredicted RBP8.63□□□□□ -1.03
TOP3B-210ENST00000444502 SFRP2Q96HF1 295 aa8.63□□□□□ -1.03
TOP3B-210ENST00000444502 PRRC2AP48634 2157 aaKnown RBP8.63□□□□□ -1.03
TOP3B-210ENST00000444502 IGLV1-44P01699 117 aa8.62□□□□□ -1.03
TOP3B-210ENST00000444502 GPR183P32249 361 aa8.62□□□□□ -1.03
TOP3B-210ENST00000444502 MFAP4P55083 255 aa8.62□□□□□ -1.03
TOP3B-210ENST00000444502 PMCHL1Q16048 86 aa8.62□□□□□ -1.03
TOP3B-210ENST00000444502 VMO1Q7Z5L0 202 aa8.62□□□□□ -1.03
TOP3B-210ENST00000444502 PPP1R27Q86WC6 154 aa8.62□□□□□ -1.03
TOP3B-210ENST00000444502 STXBP6Q8NFX7 210 aa8.62□□□□□ -1.03
TOP3B-210ENST00000444502 SRSF12Q8WXF0 261 aaKnown RBP8.62□□□□□ -1.03
TOP3B-210ENST00000444502 SIGMAR1Q99720 223 aa8.62□□□□□ -1.03
TOP3B-210ENST00000444502 IFI27L2Q9H2X8 130 aa8.62□□□□□ -1.03
TOP3B-210ENST00000444502 ACANP16112 2415 aa8.62□□□□□ -1.03
TOP3B-210ENST00000444502 IGKV1-16P04430 117 aa8.62□□□□□ -1.03
TOP3B-210ENST00000444502 STAG3L3P0CL85 134 aa8.62□□□□□ -1.03
TOP3B-210ENST00000444502 PLA2G5P39877 138 aa8.62□□□□□ -1.03
TOP3B-210ENST00000444502 RAB9AP51151 201 aa8.62□□□□□ -1.03
TOP3B-210ENST00000444502 SPATA31B1PQ5VZV4 182 aa8.62□□□□□ -1.03
TOP3B-210ENST00000444502 TP73-AS1Q9UF72 201 aa8.62□□□□□ -1.03
TOP3B-210ENST00000444502 FOXA2Q9Y261 457 aaPredicted RBP8.62□□□□□ -1.03
TOP3B-210ENST00000444502 MMP23AO75900 390 aa8.62□□□□□ -1.03
TOP3B-210ENST00000444502 LHFPL4Q7Z7J7 247 aa8.62□□□□□ -1.03
TOP3B-210ENST00000444502 FER1L6-AS1Q8NA97 138 aa8.62□□□□□ -1.03
TOP3B-210ENST00000444502 UPK2O00526 184 aa8.62□□□□□ -1.03
TOP3B-210ENST00000444502 ZNF726P1Q15940 193 aa8.62□□□□□ -1.03
TOP3B-210ENST00000444502 KLF17Q5JT82 389 aaPredicted RBP8.62□□□□□ -1.03
TOP3B-210ENST00000444502 FAM169BQ8N8A8 192 aa8.62□□□□□ -1.03
TOP3B-210ENST00000444502 CDC42EP3Q9UKI2 254 aa8.62□□□□□ -1.03
TOP3B-210ENST00000444502 COL4A2P08572 1712 aa8.61□□□□□ -1.03
TOP3B-210ENST00000444502 CENPEQ02224 2701 aa8.61□□□□□ -1.03
TOP3B-210ENST00000444502 A0A087X0K7 114 aa8.61□□□□□ -1.03
TOP3B-210ENST00000444502 C7orf71A4D174 169 aa8.61□□□□□ -1.03
TOP3B-210ENST00000444502 MSMPQ1L6U9 139 aa8.61□□□□□ -1.03
TOP3B-210ENST00000444502 TM4SF20Q53R12 229 aa8.61□□□□□ -1.03
TOP3B-210ENST00000444502 PLXNB1O43157 2135 aa8.61□□□□□ -1.03
TOP3B-210ENST00000444502 NBR2O15453 112 aa8.61□□□□□ -1.03
TOP3B-210ENST00000444502 IGKV3-20P01619 116 aa8.61□□□□□ -1.03
TOP3B-210ENST00000444502 C8orf88P0DMB2 117 aa8.61□□□□□ -1.03
TOP3B-210ENST00000444502 ARPC1AQ92747 370 aa8.61□□□□□ -1.03
TOP3B-210ENST00000444502 MCRIP2Q9BUT9 160 aaKnown RBP8.61□□□□□ -1.03
TOP3B-210ENST00000444502 GGTLC1Q9BX51 225 aa8.61□□□□□ -1.03
TOP3B-210ENST00000444502 WNT2P09544 360 aa8.61□□□□□ -1.03
TOP3B-210ENST00000444502 AZU1P20160 251 aa8.61□□□□□ -1.03
TOP3B-210ENST00000444502 BPIFA4PQ86YQ2 179 aa8.61□□□□□ -1.03
TOP3B-210ENST00000444502 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.61□□□□□ -1.03
TOP3B-210ENST00000444502 SLC25A33Q9BSK2 321 aa8.61□□□□□ -1.03
TOP3B-210ENST00000444502 CPAMD8Q8IZJ3 1885 aa8.61□□□□□ -1.03
TOP3B-210ENST00000444502 TMEM238LA0A1B0GVL6 79 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms