RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 CCL3P10147 92 aa2.98□□□□□ -1.93
VPS50-206ENST00000443443 HIST1H1BP16401 226 aaKnown RBP2.98□□□□□ -1.93
VPS50-206ENST00000443443 C16orf47Q6ZP98 133 aaPredicted RBP2.98□□□□□ -1.93
VPS50-206ENST00000443443 MIR7-3HGQ8N6C7 128 aa2.98□□□□□ -1.93
VPS50-206ENST00000443443 RNF182Q8N6D2 247 aa2.98□□□□□ -1.93
VPS50-206ENST00000443443 CNEP1R1Q8N9A8 125 aa2.98□□□□□ -1.93
VPS50-206ENST00000443443 OR4B1Q8NGF8 309 aa2.98□□□□□ -1.93
VPS50-206ENST00000443443 COPS9Q8WXC6 57 aa2.98□□□□□ -1.93
VPS50-206ENST00000443443 MCEEQ96PE7 176 aa2.98□□□□□ -1.93
VPS50-206ENST00000443443 SNRNP25Q9BV90 132 aaKnown RBP2.98□□□□□ -1.93
VPS50-206ENST00000443443 ICOSQ9Y6W8 199 aa2.98□□□□□ -1.93
VPS50-206ENST00000443443 PHLPP1O60346 1717 aa2.98□□□□□ -1.93
VPS50-206ENST00000443443 DOCK6Q96HP0 2047 aa2.97□□□□□ -1.93
VPS50-206ENST00000443443 RALGAPA2Q2PPJ7 1873 aa2.97□□□□□ -1.93
VPS50-206ENST00000443443 SYNJ1O43426 1573 aa2.97□□□□□ -1.93
VPS50-206ENST00000443443 CRB1P82279 1406 aa2.97□□□□□ -1.93
VPS50-206ENST00000443443 C7orf71A4D174 169 aa2.97□□□□□ -1.93
VPS50-206ENST00000443443 C17orf51A8MQB3 221 aa2.97□□□□□ -1.93
VPS50-206ENST00000443443 FNDC10F2Z333 226 aa2.97□□□□□ -1.93
VPS50-206ENST00000443443 H3BMM0 161 aa2.97□□□□□ -1.93
VPS50-206ENST00000443443 HLA-DRB4P13762 266 aa2.97□□□□□ -1.93
VPS50-206ENST00000443443 RNASE4P34096 147 aaKnown RBP2.97□□□□□ -1.93
VPS50-206ENST00000443443 BTG2P78543 158 aa2.97□□□□□ -1.93
VPS50-206ENST00000443443 HSD52Q0P140 79 aa2.97□□□□□ -1.93
VPS50-206ENST00000443443 ATOH7Q8N100 152 aa2.97□□□□□ -1.93
VPS50-206ENST00000443443 SIGLECL1Q8N7X8 197 aa2.97□□□□□ -1.93
VPS50-206ENST00000443443 MORN4Q8NDC4 146 aa2.97□□□□□ -1.93
VPS50-206ENST00000443443 BPIFB6Q8NFQ5 453 aa2.97□□□□□ -1.93
VPS50-206ENST00000443443 OR10P1Q8NGE3 313 aa2.97□□□□□ -1.93
VPS50-206ENST00000443443 UBE2WQ96B02 151 aa2.97□□□□□ -1.93
VPS50-206ENST00000443443 IMMP1LQ96LU5 166 aa2.97□□□□□ -1.93
VPS50-206ENST00000443443 UPK3BQ9BT76 320 aa2.97□□□□□ -1.93
VPS50-206ENST00000443443 MPC1Q9Y5U8 109 aa2.97□□□□□ -1.93
VPS50-206ENST00000443443 HLA-DRB4X5D2U9 266 aa2.97□□□□□ -1.93
VPS50-206ENST00000443443 NUP210Q8TEM1 1887 aaPredicted RBP2.96□□□□□ -1.93
VPS50-206ENST00000443443 YEATS2Q9ULM3 1422 aa2.96□□□□□ -1.94
VPS50-206ENST00000443443 LECT2O14960 151 aa2.96□□□□□ -1.94
VPS50-206ENST00000443443 RER1O15258 196 aa2.96□□□□□ -1.94
VPS50-206ENST00000443443 LY6HO94772 140 aa2.96□□□□□ -1.94
VPS50-206ENST00000443443 NPYP01303 97 aa2.96□□□□□ -1.94
VPS50-206ENST00000443443 IGKV1-16P04430 117 aa2.96□□□□□ -1.94
VPS50-206ENST00000443443 SLC25A5P05141 298 aaKnown RBP2.96□□□□□ -1.94
VPS50-206ENST00000443443 PYYP10082 97 aa2.96□□□□□ -1.94
VPS50-206ENST00000443443 MPV17P39210 176 aa2.96□□□□□ -1.94
VPS50-206ENST00000443443 S100A10P60903 97 aa2.96□□□□□ -1.94
VPS50-206ENST00000443443 TMEM258P61165 79 aa2.96□□□□□ -1.94
VPS50-206ENST00000443443 MIAQ16674 131 aa2.96□□□□□ -1.94
VPS50-206ENST00000443443 TMEM155Q4W5P6 130 aa2.96□□□□□ -1.94
VPS50-206ENST00000443443 ZFP2Q6ZN57 461 aa2.96□□□□□ -1.94
VPS50-206ENST00000443443 ADM2Q7Z4H4 148 aa2.96□□□□□ -1.94
VPS50-206ENST00000443443 GKN2Q86XP6 184 aa2.96□□□□□ -1.94
VPS50-206ENST00000443443 KCNRGQ8N5I3 272 aa2.96□□□□□ -1.94
VPS50-206ENST00000443443 WFDC11Q8NEX6 87 aa2.96□□□□□ -1.94
VPS50-206ENST00000443443 SNHG12Q9BXW3 62 aa2.96□□□□□ -1.94
VPS50-206ENST00000443443 LHX9Q9NQ69 397 aa2.96□□□□□ -1.94
VPS50-206ENST00000443443 TAS2R8Q9NYW2 309 aa2.96□□□□□ -1.94
VPS50-206ENST00000443443 COMMD3Q9UBI1 195 aa2.96□□□□□ -1.94
VPS50-206ENST00000443443 SCP2D1Q9UJQ7 156 aa2.96□□□□□ -1.94
VPS50-206ENST00000443443 IER3IP1Q9Y5U9 82 aa2.96□□□□□ -1.94
VPS50-206ENST00000443443 V9GYS6 101 aa2.96□□□□□ -1.94
VPS50-206ENST00000443443 TSPOAP1O95153 1857 aa2.96□□□□□ -1.94
VPS50-206ENST00000443443 TRIP11Q15643 1979 aa2.96□□□□□ -1.94
VPS50-206ENST00000443443 PZPP20742 1482 aa2.96□□□□□ -1.94
VPS50-206ENST00000443443 MYOM2P54296 1465 aa2.96□□□□□ -1.94
VPS50-206ENST00000443443 ARHGAP23Q9P227 1491 aa2.96□□□□□ -1.94
VPS50-206ENST00000443443 CEP164Q9UPV0 1460 aa2.96□□□□□ -1.94
VPS50-206ENST00000443443 KDM5CP41229 1560 aa2.95□□□□□ -1.94
VPS50-206ENST00000443443 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.95□□□□□ -1.94
VPS50-206ENST00000443443 PNMA8CA0A1B0GUJ8 204 aa2.95□□□□□ -1.94
VPS50-206ENST00000443443 CCDC179H3BU77 68 aa2.95□□□□□ -1.94
VPS50-206ENST00000443443 TCL1BO95988 128 aa2.95□□□□□ -1.94
VPS50-206ENST00000443443 HBDP02042 147 aa2.95□□□□□ -1.94
VPS50-206ENST00000443443 NOXRED1Q6NXP6 359 aa2.95□□□□□ -1.94
VPS50-206ENST00000443443 PP632Q6XCG6 107 aa2.95□□□□□ -1.94
VPS50-206ENST00000443443 TMEM91Q6ZNR0 172 aa2.95□□□□□ -1.94
VPS50-206ENST00000443443 C7orf65Q6ZTY9 151 aa2.95□□□□□ -1.94
VPS50-206ENST00000443443 LYZL2Q7Z4W2 148 aa2.95□□□□□ -1.94
VPS50-206ENST00000443443 TEN1Q86WV5 123 aa2.95□□□□□ -1.94
VPS50-206ENST00000443443 CLDND2Q8NHS1 167 aa2.95□□□□□ -1.94
VPS50-206ENST00000443443 LCE3DQ9BYE3 92 aa2.95□□□□□ -1.94
VPS50-206ENST00000443443 MED1Q15648 1581 aaPredicted RBP2.95□□□□□ -1.94
VPS50-206ENST00000443443 TOPBP1Q92547 1522 aa2.94□□□□□ -1.94
VPS50-206ENST00000443443 AHDC1Q5TGY3 1603 aaPredicted RBP2.94□□□□□ -1.94
VPS50-206ENST00000443443 LOXHD1Q8IVV2 1947 aa2.94□□□□□ -1.94
VPS50-206ENST00000443443 PLXNB3Q9ULL4 1909 aa2.94□□□□□ -1.94
VPS50-206ENST00000443443 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.94□□□□□ -1.94
VPS50-206ENST00000443443 IGHV3-73A0A0B4J1V6 119 aa2.94□□□□□ -1.94
VPS50-206ENST00000443443 A0A0B4J2C4 111 aa2.94□□□□□ -1.94
VPS50-206ENST00000443443 C3orf84H3BNL1 204 aa2.94□□□□□ -1.94
VPS50-206ENST00000443443 CREBL2O60519 120 aaPredicted RBP2.94□□□□□ -1.94
VPS50-206ENST00000443443 TNFP01375 233 aa2.94□□□□□ -1.94
VPS50-206ENST00000443443 IGLV1-47P01700 117 aa2.94□□□□□ -1.94
VPS50-206ENST00000443443 CD14P08571 375 aa2.94□□□□□ -1.94
VPS50-206ENST00000443443 TRGC1P0CF51 173 aa2.94□□□□□ -1.94
VPS50-206ENST00000443443 RPS10P46783 165 aaKnown RBP2.94□□□□□ -1.94
VPS50-206ENST00000443443 SNRPD3P62318 126 aaKnown RBP2.94□□□□□ -1.94
VPS50-206ENST00000443443 KISS1Q15726 138 aa2.94□□□□□ -1.94
VPS50-206ENST00000443443 KHDC3LQ587J8 217 aa2.94□□□□□ -1.94
VPS50-206ENST00000443443 DPPA3Q6W0C5 159 aa2.94□□□□□ -1.94
VPS50-206ENST00000443443 SDIM1Q6ZPB5 146 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms