RNA–Protein interactions for RNA: ENST00000442956.1

LINC00299-202, long intergenic non-protein coding RNA 299, humanhuman

TSL 2 BASIC

Gene LINC00299, Length 2,342 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-202ENST00000442956 FXYD5Q96DB9 178 aa11.38□□□□□ -0.59
LINC00299-202ENST00000442956 VPREB3Q9UKI3 123 aa11.38□□□□□ -0.59
LINC00299-202ENST00000442956 SCO2A0A1W2PP80 73 aa11.37□□□□□ -0.59
LINC00299-202ENST00000442956 CLEC3BP05452 202 aa11.37□□□□□ -0.59
LINC00299-202ENST00000442956 PPIFP30405 207 aaKnown RBP11.37□□□□□ -0.59
LINC00299-202ENST00000442956 IL17RELQ6ZVW7 336 aa11.37□□□□□ -0.59
LINC00299-202ENST00000442956 EEF1AKMT3Q96AZ1 226 aa11.37□□□□□ -0.59
LINC00299-202ENST00000442956 ACANP16112 2415 aa11.37□□□□□ -0.59
LINC00299-202ENST00000442956 GGTLC3B5MD39 225 aa11.37□□□□□ -0.59
LINC00299-202ENST00000442956 TRGV3P03979 118 aa11.37□□□□□ -0.59
LINC00299-202ENST00000442956 SNRPCP09234 159 aaKnown RBP11.37□□□□□ -0.59
LINC00299-202ENST00000442956 ATP5G2Q06055 141 aa11.37□□□□□ -0.59
LINC00299-202ENST00000442956 PNRC1Q12796 327 aaPredicted RBP11.37□□□□□ -0.59
LINC00299-202ENST00000442956 USF2Q15853 346 aaPredicted RBP11.37□□□□□ -0.59
LINC00299-202ENST00000442956 TMEM241Q24JQ0 296 aa11.37□□□□□ -0.59
LINC00299-202ENST00000442956 CCDC140Q96MF4 163 aa11.37□□□□□ -0.59
LINC00299-202ENST00000442956 DERL1Q9BUN8 251 aa11.37□□□□□ -0.59
LINC00299-202ENST00000442956 SDF2L1Q9HCN8 221 aa11.37□□□□□ -0.59
LINC00299-202ENST00000442956 NAT8Q9UHE5 227 aa11.37□□□□□ -0.59
LINC00299-202ENST00000442956 TMA7Q9Y2S6 64 aaKnown RBP11.37□□□□□ -0.59
LINC00299-202ENST00000442956 A0A1W2PRE2 83 aa11.36□□□□□ -0.59
LINC00299-202ENST00000442956 FAM223BA6NKX1 122 aa11.36□□□□□ -0.59
LINC00299-202ENST00000442956 HOXA3O43365 443 aaPredicted RBP11.36□□□□□ -0.59
LINC00299-202ENST00000442956 CLEC19AQ6UXS0 136 aa11.36□□□□□ -0.59
LINC00299-202ENST00000442956 FAM223AQ8IWN6 122 aa11.36□□□□□ -0.59
LINC00299-202ENST00000442956 PRDM13Q9H4Q3 707 aa11.36□□□□□ -0.59
LINC00299-202ENST00000442956 GAR1Q9NY12 217 aaKnown RBP11.36□□□□□ -0.59
LINC00299-202ENST00000442956 TRBV7-1A0A0A6YYK4 115 aa11.36□□□□□ -0.59
LINC00299-202ENST00000442956 GP9P14770 177 aa11.36□□□□□ -0.59
LINC00299-202ENST00000442956 SHANK2-AS3Q9BTD1 123 aa11.36□□□□□ -0.59
LINC00299-202ENST00000442956 SMCO4Q9NRQ5 59 aa11.36□□□□□ -0.59
LINC00299-202ENST00000442956 IGHV3-35A0A0C4DH35 117 aa11.35□□□□□ -0.59
LINC00299-202ENST00000442956 TPPP2P59282 170 aa11.35□□□□□ -0.59
LINC00299-202ENST00000442956 SUMO1P63165 101 aaKnown RBP11.35□□□□□ -0.59
LINC00299-202ENST00000442956 TMEM95Q3KNT9 176 aa11.35□□□□□ -0.59
LINC00299-202ENST00000442956 TEX29Q8N6K0 151 aa11.35□□□□□ -0.59
LINC00299-202ENST00000442956 C11orf52Q96A22 123 aa11.35□□□□□ -0.59
LINC00299-202ENST00000442956 H3BRN7 92 aa11.35□□□□□ -0.59
LINC00299-202ENST00000442956 H3BUA1 57 aa11.35□□□□□ -0.59
LINC00299-202ENST00000442956 BLNKQ8WV28 456 aa11.35□□□□□ -0.59
LINC00299-202ENST00000442956 TSPAN4O14817 238 aa11.34□□□□□ -0.59
LINC00299-202ENST00000442956 BRI3O95415 125 aa11.34□□□□□ -0.59
LINC00299-202ENST00000442956 NBEAP1P0C6P0 100 aa11.34□□□□□ -0.59
LINC00299-202ENST00000442956 KRTAP1-1Q07627 177 aa11.34□□□□□ -0.59
LINC00299-202ENST00000442956 ADIRFQ15847 76 aa11.34□□□□□ -0.59
LINC00299-202ENST00000442956 ZNF343Q6P1L6 599 aa11.34□□□□□ -0.59
LINC00299-202ENST00000442956 ZNF600Q6ZNG1 722 aa11.34□□□□□ -0.59
LINC00299-202ENST00000442956 GNB4Q9HAV0 340 aa11.34□□□□□ -0.59
LINC00299-202ENST00000442956 MYO9AB2RTY4 2548 aa11.34□□□□□ -0.59
LINC00299-202ENST00000442956 CRYBB3P26998 211 aa11.34□□□□□ -0.59
LINC00299-202ENST00000442956 S100A7AQ86SG5 101 aa11.34□□□□□ -0.59
LINC00299-202ENST00000442956 ELOVL1Q9BW60 279 aa11.34□□□□□ -0.59
LINC00299-202ENST00000442956 KLK15Q9H2R5 256 aa11.34□□□□□ -0.59
LINC00299-202ENST00000442956 TMEM14CQ9P0S9 112 aa11.34□□□□□ -0.59
LINC00299-202ENST00000442956 B4DEV8 164 aa11.33□□□□□ -0.6
LINC00299-202ENST00000442956 TGOLN2O43493 480 aa11.33□□□□□ -0.6
LINC00299-202ENST00000442956 PF4V1P10720 104 aa11.33□□□□□ -0.6
LINC00299-202ENST00000442956 SRP14P37108 136 aaKnown RBP11.33□□□□□ -0.6
LINC00299-202ENST00000442956 RANP62826 216 aaKnown RBP11.33□□□□□ -0.6
LINC00299-202ENST00000442956 RPL23P62829 140 aaKnown RBP11.33□□□□□ -0.6
LINC00299-202ENST00000442956 CFHR3Q02985 330 aa11.33□□□□□ -0.6
LINC00299-202ENST00000442956 SIGLECL1Q8N7X8 197 aa11.33□□□□□ -0.6
LINC00299-202ENST00000442956 ZNF414Q96IQ9 312 aa11.33□□□□□ -0.6
LINC00299-202ENST00000442956 ZNF580Q9UK33 172 aa11.33□□□□□ -0.6
LINC00299-202ENST00000442956 ZNF98A6NK75 572 aa11.32□□□□□ -0.6
LINC00299-202ENST00000442956 H3BTX0 84 aa11.32□□□□□ -0.6
LINC00299-202ENST00000442956 IGLV1-40P01703 118 aa11.32□□□□□ -0.6
LINC00299-202ENST00000442956 TOMM20LQ6UXN7 152 aa11.32□□□□□ -0.6
LINC00299-202ENST00000442956 TRBV20OR9-2A0A075B6H5 130 aa11.32□□□□□ -0.6
LINC00299-202ENST00000442956 IGHV3OR16-8A0A075B7F1 116 aa11.32□□□□□ -0.6
LINC00299-202ENST00000442956 A0A087WWC5 75 aa11.32□□□□□ -0.6
LINC00299-202ENST00000442956 CD5LO43866 347 aa11.32□□□□□ -0.6
LINC00299-202ENST00000442956 BPIFA4PQ86YQ2 179 aa11.32□□□□□ -0.6
LINC00299-202ENST00000442956 ISOC2Q96AB3 205 aa11.32□□□□□ -0.6
LINC00299-202ENST00000442956 USMG5Q96IX5 58 aa11.32□□□□□ -0.6
LINC00299-202ENST00000442956 DUX5Q96PT3 197 aa11.32□□□□□ -0.6
LINC00299-202ENST00000442956 ATP6V0BQ99437 205 aa11.32□□□□□ -0.6
LINC00299-202ENST00000442956 BMPR1BO00238 502 aa11.31□□□□□ -0.6
LINC00299-202ENST00000442956 HIST1H1EP10412 219 aaKnown RBP11.31□□□□□ -0.6
LINC00299-202ENST00000442956 RPL35P42766 123 aaKnown RBP11.31□□□□□ -0.6
LINC00299-202ENST00000442956 LCNL1Q6ZST4 164 aa11.31□□□□□ -0.6
LINC00299-202ENST00000442956 ZNF329Q86UD4 541 aa11.31□□□□□ -0.6
LINC00299-202ENST00000442956 PRSS22Q9GZN4 317 aa11.31□□□□□ -0.6
LINC00299-202ENST00000442956 NPFFR1Q9GZQ6 430 aa11.31□□□□□ -0.6
LINC00299-202ENST00000442956 RABAC1Q9UI14 185 aa11.31□□□□□ -0.6
LINC00299-202ENST00000442956 PPP5D1E7EU14 171 aa11.31□□□□□ -0.6
LINC00299-202ENST00000442956 MYCNOSP40205 109 aa11.31□□□□□ -0.6
LINC00299-202ENST00000442956 C2CD4CQ8TF44 421 aa11.31□□□□□ -0.6
LINC00299-202ENST00000442956 TUBA4BQ9H853 241 aa11.31□□□□□ -0.6
LINC00299-202ENST00000442956 ZFAND3Q9H8U3 227 aa11.31□□□□□ -0.6
LINC00299-202ENST00000442956 YAE1D1Q9NRH1 226 aa11.31□□□□□ -0.6
LINC00299-202ENST00000442956 ZNF586Q9NXT0 402 aa11.31□□□□□ -0.6
LINC00299-202ENST00000442956 PGPEP1LA6NFU8 196 aa11.3□□□□□ -0.6
LINC00299-202ENST00000442956 LINC01551Q86U37 167 aa11.3□□□□□ -0.6
LINC00299-202ENST00000442956 OR4F17Q8NGA8 305 aa11.3□□□□□ -0.6
LINC00299-202ENST00000442956 AURKAIP1Q9NWT8 199 aaPredicted RBP11.3□□□□□ -0.6
LINC00299-202ENST00000442956 HELTA6NFD8 242 aa11.3□□□□□ -0.6
LINC00299-202ENST00000442956 IGHV3-11P01762 117 aa11.3□□□□□ -0.6
LINC00299-202ENST00000442956 RAB9AP51151 201 aa11.3□□□□□ -0.6
LINC00299-202ENST00000442956 RELQ04864 619 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms