RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 ADMP35318 185 aa9.04□□□□□ -0.96
AC009404.1-202ENST00000439955 PMS2P11Q13670 270 aa9.04□□□□□ -0.96
AC009404.1-202ENST00000439955 KIAA0141Q14154 515 aaPredicted RBP9.04□□□□□ -0.96
AC009404.1-202ENST00000439955 GCSAMLQ5JQS6 135 aa9.04□□□□□ -0.96
AC009404.1-202ENST00000439955 FAM122CQ6P4D5 195 aa9.04□□□□□ -0.96
AC009404.1-202ENST00000439955 CLEC19AQ6UXS0 136 aa9.04□□□□□ -0.96
AC009404.1-202ENST00000439955 REC114Q7Z4M0 266 aa9.04□□□□□ -0.96
AC009404.1-202ENST00000439955 ZNF491Q8N8L2 437 aa9.04□□□□□ -0.96
AC009404.1-202ENST00000439955 OR4X2Q8NGF9 303 aa9.04□□□□□ -0.96
AC009404.1-202ENST00000439955 TMEM37Q8WXS4 190 aa9.04□□□□□ -0.96
AC009404.1-202ENST00000439955 UBE2E2Q96LR5 201 aa9.04□□□□□ -0.96
AC009404.1-202ENST00000439955 MAP1LC3BQ9GZQ8 125 aa9.04□□□□□ -0.96
AC009404.1-202ENST00000439955 SLC25A22Q9H936 323 aa9.04□□□□□ -0.96
AC009404.1-202ENST00000439955 DNAJC4Q9NNZ3 241 aa9.04□□□□□ -0.96
AC009404.1-202ENST00000439955 EPPK1P58107 5090 aaKnown RBP9.04□□□□□ -0.96
AC009404.1-202ENST00000439955 BIRC6Q9NR09 4857 aa9.03□□□□□ -0.96
AC009404.1-202ENST00000439955 RAB19A4D1S5 217 aa9.03□□□□□ -0.96
AC009404.1-202ENST00000439955 STAG3L2P0CL84 134 aa9.03□□□□□ -0.96
AC009404.1-202ENST00000439955 STAG3L3P0CL85 134 aa9.03□□□□□ -0.96
AC009404.1-202ENST00000439955 TAS2R45P59539 299 aa9.03□□□□□ -0.96
AC009404.1-202ENST00000439955 OXLD1Q5BKU9 147 aa9.03□□□□□ -0.96
AC009404.1-202ENST00000439955 FAM78BQ5VT40 261 aa9.03□□□□□ -0.96
AC009404.1-202ENST00000439955 C10orf113Q5VZT2 155 aa9.03□□□□□ -0.96
AC009404.1-202ENST00000439955 EIF4E3Q8N5X7 224 aaKnown RBP9.03□□□□□ -0.96
AC009404.1-202ENST00000439955 SFT2D1Q8WV19 159 aa9.03□□□□□ -0.96
AC009404.1-202ENST00000439955 RNF125Q96EQ8 232 aa9.03□□□□□ -0.96
AC009404.1-202ENST00000439955 CHRDL1Q9BU40 450 aa9.03□□□□□ -0.96
AC009404.1-202ENST00000439955 HRH4Q9H3N8 390 aa9.03□□□□□ -0.96
AC009404.1-202ENST00000439955 AURKAIP1Q9NWT8 199 aaPredicted RBP9.03□□□□□ -0.96
AC009404.1-202ENST00000439955 MRPL27Q9P0M9 148 aaKnown RBP9.03□□□□□ -0.96
AC009404.1-202ENST00000439955 RNF24Q9Y225 148 aa9.03□□□□□ -0.96
AC009404.1-202ENST00000439955 HIGD1AQ9Y241 93 aa9.03□□□□□ -0.96
AC009404.1-202ENST00000439955 BMPR1BO00238 502 aa9.02□□□□□ -0.97
AC009404.1-202ENST00000439955 CXorf1O96002 111 aa9.02□□□□□ -0.97
AC009404.1-202ENST00000439955 IL4P05112 153 aa9.02□□□□□ -0.97
AC009404.1-202ENST00000439955 LGALS1P09382 135 aaKnown RBP9.02□□□□□ -0.97
AC009404.1-202ENST00000439955 ORM2P19652 201 aa9.02□□□□□ -0.97
AC009404.1-202ENST00000439955 ARL3P36405 182 aa9.02□□□□□ -0.97
AC009404.1-202ENST00000439955 LYZP61626 148 aa9.02□□□□□ -0.97
AC009404.1-202ENST00000439955 KHDC3LQ587J8 217 aa9.02□□□□□ -0.97
AC009404.1-202ENST00000439955 C10orf99Q6UWK7 81 aa9.02□□□□□ -0.97
AC009404.1-202ENST00000439955 PATE2Q6UY27 113 aa9.02□□□□□ -0.97
AC009404.1-202ENST00000439955 PQLC2Q6ZP29 291 aa9.02□□□□□ -0.97
AC009404.1-202ENST00000439955 SSX7Q7RTT5 188 aa9.02□□□□□ -0.97
AC009404.1-202ENST00000439955 COMMD7Q86VX2 200 aa9.02□□□□□ -0.97
AC009404.1-202ENST00000439955 OR5AU1Q8NGC0 362 aa9.02□□□□□ -0.97
AC009404.1-202ENST00000439955 OR1B1Q8NGR6 318 aa9.02□□□□□ -0.97
AC009404.1-202ENST00000439955 MARC2Q969Z3 335 aa9.02□□□□□ -0.97
AC009404.1-202ENST00000439955 SEPSECSQ9HD40 501 aaKnown RBP9.02□□□□□ -0.97
AC009404.1-202ENST00000439955 TECRQ9NZ01 308 aaKnown RBP9.02□□□□□ -0.97
AC009404.1-202ENST00000439955 NDUFA4O00483 81 aa9.01□□□□□ -0.97
AC009404.1-202ENST00000439955 GGCTO75223 188 aaKnown RBP9.01□□□□□ -0.97
AC009404.1-202ENST00000439955 RPLP1P05386 114 aaKnown RBP9.01□□□□□ -0.97
AC009404.1-202ENST00000439955 C8orf88P0DMB2 117 aa9.01□□□□□ -0.97
AC009404.1-202ENST00000439955 TAGLN2P37802 199 aaKnown RBP9.01□□□□□ -0.97
AC009404.1-202ENST00000439955 CDX1P47902 265 aaPredicted RBP9.01□□□□□ -0.97
AC009404.1-202ENST00000439955 PSMB3P49720 205 aa9.01□□□□□ -0.97
AC009404.1-202ENST00000439955 PPT1P50897 306 aa9.01□□□□□ -0.97
AC009404.1-202ENST00000439955 UQCC3Q6UW78 93 aa9.01□□□□□ -0.97
AC009404.1-202ENST00000439955 LCN15Q6UWW0 184 aa9.01□□□□□ -0.97
AC009404.1-202ENST00000439955 LCNL1Q6ZST4 164 aa9.01□□□□□ -0.97
AC009404.1-202ENST00000439955 MIR17HGQ75NE6 70 aa9.01□□□□□ -0.97
AC009404.1-202ENST00000439955 LINC00305Q7Z4B0 112 aa9.01□□□□□ -0.97
AC009404.1-202ENST00000439955 C11orf44Q8N8P7 122 aa9.01□□□□□ -0.97
AC009404.1-202ENST00000439955 ZNF414Q96IQ9 312 aa9.01□□□□□ -0.97
AC009404.1-202ENST00000439955 PBDC1Q9BVG4 233 aa9.01□□□□□ -0.97
AC009404.1-202ENST00000439955 ZFAND3Q9H8U3 227 aa9.01□□□□□ -0.97
AC009404.1-202ENST00000439955 DOK5Q9P104 306 aa9.01□□□□□ -0.97
AC009404.1-202ENST00000439955 PEF1Q9UBV8 284 aaKnown RBP9.01□□□□□ -0.97
AC009404.1-202ENST00000439955 PUS1Q9Y606 427 aaKnown RBP eCLIP9.01□□□□□ -0.97
AC009404.1-202ENST00000439955 TENM3Q9P273 2699 aa9.01□□□□□ -0.97
AC009404.1-202ENST00000439955 H3BRN7 92 aa9□□□□□ -0.97
AC009404.1-202ENST00000439955 IFNA1P01562 189 aa9□□□□□ -0.97
AC009404.1-202ENST00000439955 IGHV3-11P01762 117 aa9□□□□□ -0.97
AC009404.1-202ENST00000439955 USF2Q15853 346 aaPredicted RBP9□□□□□ -0.97
AC009404.1-202ENST00000439955 SPATA31B1PQ5VZV4 182 aa9□□□□□ -0.97
AC009404.1-202ENST00000439955 STXBP6Q8NFX7 210 aa9□□□□□ -0.97
AC009404.1-202ENST00000439955 FAM210AQ96ND0 272 aa9□□□□□ -0.97
AC009404.1-202ENST00000439955 SHANK2-AS3Q9BTD1 123 aa9□□□□□ -0.97
AC009404.1-202ENST00000439955 SMDT1Q9H4I9 107 aa9□□□□□ -0.97
AC009404.1-202ENST00000439955 GNB4Q9HAV0 340 aa9□□□□□ -0.97
AC009404.1-202ENST00000439955 MANBALQ9NQG1 85 aa9□□□□□ -0.97
AC009404.1-202ENST00000439955 RABAC1Q9UI14 185 aa9□□□□□ -0.97
AC009404.1-202ENST00000439955 ARL2-SNX15V9GYD0 113 aa9□□□□□ -0.97
AC009404.1-202ENST00000439955 PPP5D1E7EU14 171 aa8.99□□□□□ -0.97
AC009404.1-202ENST00000439955 NDUFS6O75380 124 aaKnown RBP8.99□□□□□ -0.97
AC009404.1-202ENST00000439955 ARL14EPLP0DKL9 152 aa8.99□□□□□ -0.97
AC009404.1-202ENST00000439955 FGF8P55075 233 aaPredicted RBP8.99□□□□□ -0.97
AC009404.1-202ENST00000439955 TOMM20LQ6UXN7 152 aa8.99□□□□□ -0.97
AC009404.1-202ENST00000439955 C4orf3Q8WVX3 66 aa8.99□□□□□ -0.97
AC009404.1-202ENST00000439955 FAM167A-AS1Q96KT0 104 aa8.99□□□□□ -0.97
AC009404.1-202ENST00000439955 UHRF2Q96PU4 802 aa8.99□□□□□ -0.97
AC009404.1-202ENST00000439955 SLC25A39Q9BZJ4 359 aaPredicted RBP8.99□□□□□ -0.97
AC009404.1-202ENST00000439955 TMEM167BQ9NRX6 74 aa8.99□□□□□ -0.97
AC009404.1-202ENST00000439955 I3L521 148 aa8.98□□□□□ -0.97
AC009404.1-202ENST00000439955 HMGB3O15347 200 aaKnown RBP8.98□□□□□ -0.97
AC009404.1-202ENST00000439955 TRBV12-3P01733 135 aa8.98□□□□□ -0.97
AC009404.1-202ENST00000439955 HSPB1P04792 205 aaKnown RBP8.98□□□□□ -0.97
AC009404.1-202ENST00000439955 GCHFRP30047 84 aa8.98□□□□□ -0.97
AC009404.1-202ENST00000439955 CCL20P78556 96 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms