RNA–Protein interactions for RNA: ENST00000437564.5

MCF2-205, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-205ENST00000437564 MYMXA0A1B0GTQ4 84 aa5.21□□□□□ -1.58
MCF2-205ENST00000437564 PRRG2O14669 202 aa5.21□□□□□ -1.58
MCF2-205ENST00000437564 APOHP02749 345 aaPredicted RBP5.21□□□□□ -1.58
MCF2-205ENST00000437564 FRMD6-AS1P0C7T7 363 aa5.21□□□□□ -1.58
MCF2-205ENST00000437564 VSIG8P0DPA2 414 aa5.21□□□□□ -1.58
MCF2-205ENST00000437564 VPREB1P12018 145 aa5.21□□□□□ -1.58
MCF2-205ENST00000437564 COL8A2P25067 703 aa5.21□□□□□ -1.58
MCF2-205ENST00000437564 PSMB2P49721 201 aa5.21□□□□□ -1.58
MCF2-205ENST00000437564 SRYQ05066 204 aa5.21□□□□□ -1.58
MCF2-205ENST00000437564 ZAR1Q86SH2 424 aa5.21□□□□□ -1.58
MCF2-205ENST00000437564 LINC00311Q8N616 119 aa5.21□□□□□ -1.58
MCF2-205ENST00000437564 FOXB1Q99853 325 aa5.21□□□□□ -1.58
MCF2-205ENST00000437564 TAS2R4Q9NYW5 299 aa5.21□□□□□ -1.58
MCF2-205ENST00000437564 TAAR2Q9P1P5 351 aa5.21□□□□□ -1.58
MCF2-205ENST00000437564 F11RQ9Y624 299 aaKnown RBP5.21□□□□□ -1.58
MCF2-205ENST00000437564 SERP1Q9Y6X1 66 aa5.21□□□□□ -1.58
MCF2-205ENST00000437564 ZNF831Q5JPB2 1677 aa5.21□□□□□ -1.58
MCF2-205ENST00000437564 TRPM6Q9BX84 2022 aa5.21□□□□□ -1.58
MCF2-205ENST00000437564 SMIM26A0A096LP01 95 aa5.2□□□□□ -1.58
MCF2-205ENST00000437564 TRAV26-2A0A0B4J265 109 aa5.2□□□□□ -1.58
MCF2-205ENST00000437564 TRAV17A0A0B4J275 112 aa5.2□□□□□ -1.58
MCF2-205ENST00000437564 LYZL6O75951 148 aa5.2□□□□□ -1.58
MCF2-205ENST00000437564 GP9P14770 177 aa5.2□□□□□ -1.58
MCF2-205ENST00000437564 GATA1P15976 413 aaPredicted RBP5.2□□□□□ -1.58
MCF2-205ENST00000437564 CDSNQ15517 529 aa5.2□□□□□ -1.58
MCF2-205ENST00000437564 CST6Q15828 149 aa5.2□□□□□ -1.58
MCF2-205ENST00000437564 WDR38Q5JTN6 314 aa5.2□□□□□ -1.58
MCF2-205ENST00000437564 LINC00173Q6ZV60 143 aa5.2□□□□□ -1.58
MCF2-205ENST00000437564 C11orf44Q8N8P7 122 aa5.2□□□□□ -1.58
MCF2-205ENST00000437564 RFESDQ8TAC1 157 aa5.2□□□□□ -1.58
MCF2-205ENST00000437564 MRPL53Q96EL3 112 aaKnown RBP5.2□□□□□ -1.58
MCF2-205ENST00000437564 C2orf48Q96LS8 159 aa5.2□□□□□ -1.58
MCF2-205ENST00000437564 DEFB118Q96PH6 123 aa5.2□□□□□ -1.58
MCF2-205ENST00000437564 PRSS27Q9BQR3 290 aa5.2□□□□□ -1.58
MCF2-205ENST00000437564 HDHD3Q9BSH5 251 aaPredicted RBP5.2□□□□□ -1.58
MCF2-205ENST00000437564 PRRG4Q9BZD6 226 aa5.2□□□□□ -1.58
MCF2-205ENST00000437564 ZNF442Q9H7R0 627 aa5.2□□□□□ -1.58
MCF2-205ENST00000437564 KIAA1549Q9HCM3 1950 aa5.2□□□□□ -1.58
MCF2-205ENST00000437564 LTBP4Q8N2S1 1624 aa5.2□□□□□ -1.58
MCF2-205ENST00000437564 MYBPHLA2RUH7 354 aa5.2□□□□□ -1.58
MCF2-205ENST00000437564 P01737 135 aa5.2□□□□□ -1.58
MCF2-205ENST00000437564 NPC2P61916 151 aa5.2□□□□□ -1.58
MCF2-205ENST00000437564 TMEM170BQ5T4T1 132 aa5.2□□□□□ -1.58
MCF2-205ENST00000437564 MRPL55Q7Z7F7 128 aaKnown RBP5.2□□□□□ -1.58
MCF2-205ENST00000437564 KRTAP1-3Q8IUG1 177 aa5.2□□□□□ -1.58
MCF2-205ENST00000437564 TDHQ8IZJ6 230 aa5.2□□□□□ -1.58
MCF2-205ENST00000437564 SLC25A22Q9H936 323 aa5.2□□□□□ -1.58
MCF2-205ENST00000437564 PRR32B1ATL7 298 aa5.19□□□□□ -1.58
MCF2-205ENST00000437564 LGALS9O00182 355 aa5.19□□□□□ -1.58
MCF2-205ENST00000437564 MAGEA5P43359 124 aa5.19□□□□□ -1.58
MCF2-205ENST00000437564 UBE2L3P68036 154 aaKnown RBP5.19□□□□□ -1.58
MCF2-205ENST00000437564 SP6Q3SY56 376 aa5.19□□□□□ -1.58
MCF2-205ENST00000437564 FAM201AQ5SY85 155 aa5.19□□□□□ -1.58
MCF2-205ENST00000437564 LINC01590Q5TEZ4 76 aa5.19□□□□□ -1.58
MCF2-205ENST00000437564 LINC01561Q8N1V8 128 aa5.19□□□□□ -1.58
MCF2-205ENST00000437564 DRAM1Q8N682 238 aa5.19□□□□□ -1.58
MCF2-205ENST00000437564 BORCS8Q96FH0 119 aa5.19□□□□□ -1.58
MCF2-205ENST00000437564 LIME1Q9H400 295 aa5.19□□□□□ -1.58
MCF2-205ENST00000437564 DPH3P1Q9H4G8 78 aa5.19□□□□□ -1.58
MCF2-205ENST00000437564 FAM60AQ9NP50 221 aa5.19□□□□□ -1.58
MCF2-205ENST00000437564 LINC00527Q9UJ94 153 aa5.19□□□□□ -1.58
MCF2-205ENST00000437564 LSM7Q9UK45 103 aaKnown RBP5.19□□□□□ -1.58
MCF2-205ENST00000437564 TRBV25-1A0A075B6N4 114 aa5.18□□□□□ -1.58
MCF2-205ENST00000437564 IGHV3OR15-7A0A075B7D8 119 aa5.18□□□□□ -1.58
MCF2-205ENST00000437564 C16orf97H3BN30 126 aa5.18□□□□□ -1.58
MCF2-205ENST00000437564 C1orf105O95561 183 aa5.18□□□□□ -1.58
MCF2-205ENST00000437564 TCL1BO95988 128 aa5.18□□□□□ -1.58
MCF2-205ENST00000437564 IGKV1D-33P01593 117 aa5.18□□□□□ -1.58
MCF2-205ENST00000437564 IGKV1-33P01594 117 aa5.18□□□□□ -1.58
MCF2-205ENST00000437564 CCL8P80075 99 aa5.18□□□□□ -1.58
MCF2-205ENST00000437564 MRPS36P82909 103 aaKnown RBP5.18□□□□□ -1.58
MCF2-205ENST00000437564 Q6ZRU5 148 aa5.18□□□□□ -1.58
MCF2-205ENST00000437564 Q8N1Y9 231 aa5.18□□□□□ -1.58
MCF2-205ENST00000437564 DSCR8Q96T75 97 aa5.18□□□□□ -1.58
MCF2-205ENST00000437564 NXT2Q9NPJ8 142 aaKnown RBP5.18□□□□□ -1.58
MCF2-205ENST00000437564 HHLA3Q9XRX5 114 aa5.18□□□□□ -1.58
MCF2-205ENST00000437564 TIMM13Q9Y5L4 95 aaPredicted RBP5.18□□□□□ -1.58
MCF2-205ENST00000437564 NUP98P52948 1817 aa5.18□□□□□ -1.58
MCF2-205ENST00000437564 hADV29S1A0JD25 119 aa5.18□□□□□ -1.58
MCF2-205ENST00000437564 NPIPB11E5RHQ5 1161 aa5.18□□□□□ -1.58
MCF2-205ENST00000437564 F8W735 103 aaPredicted RBP5.18□□□□□ -1.58
MCF2-205ENST00000437564 H3BT86 120 aa5.18□□□□□ -1.58
MCF2-205ENST00000437564 SLC25A20O43772 301 aa5.18□□□□□ -1.58
MCF2-205ENST00000437564 PLAUP00749 431 aa5.18□□□□□ -1.58
MCF2-205ENST00000437564 GFERP55789 205 aa5.18□□□□□ -1.58
MCF2-205ENST00000437564 PCSK4Q6UW60 755 aa5.18□□□□□ -1.58
MCF2-205ENST00000437564 IGFL2Q6UWQ7 119 aa5.18□□□□□ -1.58
MCF2-205ENST00000437564 GTSCR1Q86UQ5 136 aa5.18□□□□□ -1.58
MCF2-205ENST00000437564 PCP2Q8IVA1 136 aa5.18□□□□□ -1.58
MCF2-205ENST00000437564 RPRMLQ8N4K4 120 aa5.18□□□□□ -1.58
MCF2-205ENST00000437564 RITA1Q96K30 269 aa5.18□□□□□ -1.58
MCF2-205ENST00000437564 TRGV9Q99603 122 aa5.18□□□□□ -1.58
MCF2-205ENST00000437564 C19orf25Q9UFG5 118 aaPredicted RBP5.18□□□□□ -1.58
MCF2-205ENST00000437564 DOCK11Q5JSL3 2073 aa5.18□□□□□ -1.58
MCF2-205ENST00000437564 MYO16Q9Y6X6 1858 aa5.17□□□□□ -1.58
MCF2-205ENST00000437564 A0A0U1RQV1 116 aa5.17□□□□□ -1.58
MCF2-205ENST00000437564 K7ESM1 405 aa5.17□□□□□ -1.58
MCF2-205ENST00000437564 SRSF10O75494 262 aaKnown RBP5.17□□□□□ -1.58
MCF2-205ENST00000437564 NXPH3O95157 252 aa5.17□□□□□ -1.58
MCF2-205ENST00000437564 ELANEP08246 267 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms