RNA–Protein interactions for RNA: ENST00000436976.1

HMGN1P19-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 19, humanhuman

BASIC

Gene HMGN1P19, Length 333 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P19-201ENST00000436976 SEPSECSQ9HD40 501 aaKnown RBP11.26□□□□□ -0.61
HMGN1P19-201ENST00000436976 GOLT1BQ9Y3E0 138 aa11.26□□□□□ -0.61
HMGN1P19-201ENST00000436976 ARL6IP5O75915 188 aa11.25□□□□□ -0.61
HMGN1P19-201ENST00000436976 DEFB130BP0DP73 79 aa11.25□□□□□ -0.61
HMGN1P19-201ENST00000436976 DEFB130AP0DP74 79 aa11.25□□□□□ -0.61
HMGN1P19-201ENST00000436976 LPAR6P43657 344 aa11.25□□□□□ -0.61
HMGN1P19-201ENST00000436976 NKX2-1P43699 371 aaPredicted RBP11.25□□□□□ -0.61
HMGN1P19-201ENST00000436976 SPHARQ15513 63 aa11.25□□□□□ -0.61
HMGN1P19-201ENST00000436976 Q5BKY6 102 aa11.25□□□□□ -0.61
HMGN1P19-201ENST00000436976 TMEM69Q5SWH9 247 aa11.25□□□□□ -0.61
HMGN1P19-201ENST00000436976 CYGBQ8WWM9 190 aa11.25□□□□□ -0.61
HMGN1P19-201ENST00000436976 UPK3BQ9BT76 320 aa11.25□□□□□ -0.61
HMGN1P19-201ENST00000436976 LOC100506127A0A0U1RQW1 187 aa11.24□□□□□ -0.61
HMGN1P19-201ENST00000436976 DNAH10OSP0CZ25 163 aa11.24□□□□□ -0.61
HMGN1P19-201ENST00000436976 F2RP25116 425 aa11.24□□□□□ -0.61
HMGN1P19-201ENST00000436976 ARL6IP1Q15041 203 aa11.24□□□□□ -0.61
HMGN1P19-201ENST00000436976 TEX261Q6UWH6 196 aa11.24□□□□□ -0.61
HMGN1P19-201ENST00000436976 NARS2Q96I59 477 aaKnown RBP11.24□□□□□ -0.61
HMGN1P19-201ENST00000436976 C7orf50Q9BRJ6 194 aaKnown RBP11.24□□□□□ -0.61
HMGN1P19-201ENST00000436976 NRN1Q9NPD7 142 aa11.24□□□□□ -0.61
HMGN1P19-201ENST00000436976 NIT2Q9NQR4 276 aa11.24□□□□□ -0.61
HMGN1P19-201ENST00000436976 FKBP11Q9NYL4 201 aa11.24□□□□□ -0.61
HMGN1P19-201ENST00000436976 U3KQ87 197 aa11.24□□□□□ -0.61
HMGN1P19-201ENST00000436976 C9orf170A2RU37 121 aa11.23□□□□□ -0.61
HMGN1P19-201ENST00000436976 LYRM9A8MSI8 78 aa11.23□□□□□ -0.61
HMGN1P19-201ENST00000436976 IFNA5P01569 189 aa11.23□□□□□ -0.61
HMGN1P19-201ENST00000436976 IGKV1-17P01599 117 aa11.23□□□□□ -0.61
HMGN1P19-201ENST00000436976 RLN1P04808 185 aa11.23□□□□□ -0.61
HMGN1P19-201ENST00000436976 PRCDQ00LT1 54 aa11.23□□□□□ -0.61
HMGN1P19-201ENST00000436976 FABP5Q01469 135 aa11.23□□□□□ -0.61
HMGN1P19-201ENST00000436976 GAGE1Q13065 139 aa11.23□□□□□ -0.61
HMGN1P19-201ENST00000436976 FCN2Q15485 313 aa11.23□□□□□ -0.61
HMGN1P19-201ENST00000436976 TMEM17Q86X19 198 aa11.23□□□□□ -0.61
HMGN1P19-201ENST00000436976 C12orf45Q8N5I9 185 aaPredicted RBP11.23□□□□□ -0.61
HMGN1P19-201ENST00000436976 BPIFB6Q8NFQ5 453 aa11.23□□□□□ -0.61
HMGN1P19-201ENST00000436976 CLUHP3Q96NS8 147 aa11.23□□□□□ -0.61
HMGN1P19-201ENST00000436976 PFDN5Q99471 154 aa11.23□□□□□ -0.61
HMGN1P19-201ENST00000436976 MIXL1Q9H2W2 232 aa11.23□□□□□ -0.61
HMGN1P19-201ENST00000436976 IFITM5A6NNB3 132 aa11.22□□□□□ -0.61
HMGN1P19-201ENST00000436976 ERVFC1-1P60608 527 aa11.22□□□□□ -0.61
HMGN1P19-201ENST00000436976 ZNF79Q15937 498 aa11.22□□□□□ -0.61
HMGN1P19-201ENST00000436976 MLANAQ16655 118 aa11.22□□□□□ -0.61
HMGN1P19-201ENST00000436976 ESRGQ1W209 222 aa11.22□□□□□ -0.61
HMGN1P19-201ENST00000436976 TIGITQ495A1 244 aa11.22□□□□□ -0.61
HMGN1P19-201ENST00000436976 OR4B1Q8NGF8 309 aa11.22□□□□□ -0.61
HMGN1P19-201ENST00000436976 LGALS14Q8TCE9 139 aa11.22□□□□□ -0.61
HMGN1P19-201ENST00000436976 TMEM230Q96A57 120 aa11.22□□□□□ -0.61
HMGN1P19-201ENST00000436976 FNDC4Q9H6D8 234 aaPredicted RBP11.22□□□□□ -0.61
HMGN1P19-201ENST00000436976 LRP2P98164 4655 aa11.22□□□□□ -0.61
HMGN1P19-201ENST00000436976 A0A0B4J293 547 aa11.21□□□□□ -0.61
HMGN1P19-201ENST00000436976 PLAC8L1A1L4L8 177 aa11.21□□□□□ -0.61
HMGN1P19-201ENST00000436976 EREGO14944 169 aa11.21□□□□□ -0.61
HMGN1P19-201ENST00000436976 ATP5G1P05496 136 aa11.21□□□□□ -0.61
HMGN1P19-201ENST00000436976 RPS19P39019 145 aaKnown RBP11.21□□□□□ -0.61
HMGN1P19-201ENST00000436976 ATP5G3P48201 142 aa11.21□□□□□ -0.61
HMGN1P19-201ENST00000436976 SPINK9Q5DT21 86 aa11.21□□□□□ -0.61
HMGN1P19-201ENST00000436976 FOXI2Q6ZQN5 318 aa11.21□□□□□ -0.61
HMGN1P19-201ENST00000436976 BEST4Q8NFU0 473 aa11.21□□□□□ -0.61
HMGN1P19-201ENST00000436976 MAGT1Q9H0U3 335 aa11.21□□□□□ -0.61
HMGN1P19-201ENST00000436976 ZNF705GA8MUZ8 300 aaPredicted RBP11.2□□□□□ -0.62
HMGN1P19-201ENST00000436976 PGLYRP1O75594 196 aaPredicted RBP11.2□□□□□ -0.62
HMGN1P19-201ENST00000436976 WDR73Q6P4I2 378 aa11.2□□□□□ -0.62
HMGN1P19-201ENST00000436976 DYNC2LI1Q8TCX1 351 aa11.2□□□□□ -0.62
HMGN1P19-201ENST00000436976 SCP2D1Q9UJQ7 156 aa11.2□□□□□ -0.62
HMGN1P19-201ENST00000436976 BOLA1Q9Y3E2 137 aa11.2□□□□□ -0.62
HMGN1P19-201ENST00000436976 TNFRSF18Q9Y5U5 241 aa11.2□□□□□ -0.62
HMGN1P19-201ENST00000436976 ALG5Q9Y673 324 aa11.2□□□□□ -0.62
HMGN1P19-201ENST00000436976 A0A087WTM6 91 aa11.19□□□□□ -0.62
HMGN1P19-201ENST00000436976 A0A1B0GV90 55 aa11.19□□□□□ -0.62
HMGN1P19-201ENST00000436976 F6UB75 175 aa11.19□□□□□ -0.62
HMGN1P19-201ENST00000436976 GCSHP23434 173 aa11.19□□□□□ -0.62
HMGN1P19-201ENST00000436976 RORCP51449 518 aa11.19□□□□□ -0.62
HMGN1P19-201ENST00000436976 ERHP84090 104 aaKnown RBP11.19□□□□□ -0.62
HMGN1P19-201ENST00000436976 PSG9Q00887 426 aa11.19□□□□□ -0.62
HMGN1P19-201ENST00000436976 SIGLEC15Q6ZMC9 328 aa11.19□□□□□ -0.62
HMGN1P19-201ENST00000436976 OR4X1Q8NH49 305 aa11.19□□□□□ -0.62
HMGN1P19-201ENST00000436976 SSR3Q9UNL2 185 aa11.19□□□□□ -0.62
HMGN1P19-201ENST00000436976 MRPS16Q9Y3D3 137 aaKnown RBP11.19□□□□□ -0.62
HMGN1P19-201ENST00000436976 EIF3GO75821 320 aaKnown RBP eCLIP11.18□□□□□ -0.62
HMGN1P19-201ENST00000436976 HSPE1P61604 102 aaKnown RBP11.18□□□□□ -0.62
HMGN1P19-201ENST00000436976 TRAM1Q15629 374 aa11.18□□□□□ -0.62
HMGN1P19-201ENST00000436976 RNASE12Q5GAN4 147 aaKnown RBP11.18□□□□□ -0.62
HMGN1P19-201ENST00000436976 SMIM15Q7Z3B0 74 aa11.18□□□□□ -0.62
HMGN1P19-201ENST00000436976 RAB24Q969Q5 203 aa11.18□□□□□ -0.62
HMGN1P19-201ENST00000436976 LINC00052Q96N35 136 aa11.18□□□□□ -0.62
HMGN1P19-201ENST00000436976 KCNIP3Q9Y2W7 256 aa11.18□□□□□ -0.62
HMGN1P19-201ENST00000436976 CBY3A6NI87 242 aa11.17□□□□□ -0.62
HMGN1P19-201ENST00000436976 M0QYG6 137 aa11.17□□□□□ -0.62
HMGN1P19-201ENST00000436976 BUB3O43684 328 aa11.17□□□□□ -0.62
HMGN1P19-201ENST00000436976 CTF1Q16619 201 aa11.17□□□□□ -0.62
HMGN1P19-201ENST00000436976 FAM78BQ5VT40 261 aa11.17□□□□□ -0.62
HMGN1P19-201ENST00000436976 MCFD2Q8NI22 146 aa11.17□□□□□ -0.62
HMGN1P19-201ENST00000436976 SEC22AQ96IW7 307 aa11.17□□□□□ -0.62
HMGN1P19-201ENST00000436976 TMEM208Q9BTX3 173 aa11.17□□□□□ -0.62
HMGN1P19-201ENST00000436976 FUNDC2Q9BWH2 189 aa11.17□□□□□ -0.62
HMGN1P19-201ENST00000436976 NAA50Q9GZZ1 169 aaKnown RBP11.17□□□□□ -0.62
HMGN1P19-201ENST00000436976 SCGB1D2O95969 90 aa11.16□□□□□ -0.62
HMGN1P19-201ENST00000436976 RNASE2P10153 161 aaKnown RBP11.16□□□□□ -0.62
HMGN1P19-201ENST00000436976 AZU1P20160 251 aa11.16□□□□□ -0.62
HMGN1P19-201ENST00000436976 PSMA1P25786 263 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms