RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 VWC2Q2TAL6 325 aa9.24□□□□□ -0.93
SCN4A-201ENST00000435607 RBBP6Q7Z6E9 1792 aaKnown RBP9.24□□□□□ -0.93
SCN4A-201ENST00000435607 HEPN1Q6WQI6 88 aa9.24□□□□□ -0.93
SCN4A-201ENST00000435607 CACNA1EQ15878 2313 aa9.24□□□□□ -0.93
SCN4A-201ENST00000435607 PLSCR4Q9NRQ2 329 aa9.24□□□□□ -0.93
SCN4A-201ENST00000435607 J3QLI3 93 aa9.24□□□□□ -0.93
SCN4A-201ENST00000435607 GZMMP51124 257 aa9.24□□□□□ -0.93
SCN4A-201ENST00000435607 RPL15P61313 204 aaKnown RBP9.24□□□□□ -0.93
SCN4A-201ENST00000435607 KLF5Q13887 457 aaPredicted RBP9.24□□□□□ -0.93
SCN4A-201ENST00000435607 CRLF1O75462 422 aa9.24□□□□□ -0.93
SCN4A-201ENST00000435607 C4orf48Q5BLP8 95 aa9.24□□□□□ -0.93
SCN4A-201ENST00000435607 LY6G5BQ8NDX9 201 aa9.24□□□□□ -0.93
SCN4A-201ENST00000435607 RNASE7Q9H1E1 156 aaKnown RBP9.24□□□□□ -0.93
SCN4A-201ENST00000435607 ZNF250P15622 560 aa9.23□□□□□ -0.93
SCN4A-201ENST00000435607 TMEM256Q8N2U0 113 aa9.23□□□□□ -0.93
SCN4A-201ENST00000435607 TMEM158Q8WZ71 300 aa9.23□□□□□ -0.93
SCN4A-201ENST00000435607 SMIM2Q9BVW6 85 aa9.23□□□□□ -0.93
SCN4A-201ENST00000435607 A0A1B0GWJ7 208 aa9.23□□□□□ -0.93
SCN4A-201ENST00000435607 TAL2Q16559 108 aa9.23□□□□□ -0.93
SCN4A-201ENST00000435607 TMEM155Q4W5P6 130 aa9.23□□□□□ -0.93
SCN4A-201ENST00000435607 FAM19A2Q8N3H0 131 aa9.23□□□□□ -0.93
SCN4A-201ENST00000435607 ST6GALNAC6Q969X2 333 aa9.23□□□□□ -0.93
SCN4A-201ENST00000435607 SLC25A39Q9BZJ4 359 aaPredicted RBP9.23□□□□□ -0.93
SCN4A-201ENST00000435607 MPDZO75970 2070 aa9.23□□□□□ -0.93
SCN4A-201ENST00000435607 TMEM200BQ69YZ2 307 aa9.23□□□□□ -0.93
SCN4A-201ENST00000435607 WBP1Q96G27 269 aa9.23□□□□□ -0.93
SCN4A-201ENST00000435607 RPUSD1Q9UJJ7 312 aaKnown RBP9.23□□□□□ -0.93
SCN4A-201ENST00000435607 MSRB2Q9Y3D2 182 aa9.23□□□□□ -0.93
SCN4A-201ENST00000435607 COL18A1P39060 1754 aa9.23□□□□□ -0.93
SCN4A-201ENST00000435607 ZNF98A6NK75 572 aa9.23□□□□□ -0.93
SCN4A-201ENST00000435607 H3BUT2 72 aa9.23□□□□□ -0.93
SCN4A-201ENST00000435607 ANXA2RQ3ZCQ2 193 aa9.23□□□□□ -0.93
SCN4A-201ENST00000435607 IL17RELQ6ZVW7 336 aa9.23□□□□□ -0.93
SCN4A-201ENST00000435607 IGKV2-40A0A087WW87 121 aaPredicted RBP9.23□□□□□ -0.93
SCN4A-201ENST00000435607 NDUFS5O43920 106 aa9.23□□□□□ -0.93
SCN4A-201ENST00000435607 IGKV2D-40P01614 121 aaPredicted RBP9.23□□□□□ -0.93
SCN4A-201ENST00000435607 NMBP08949 121 aa9.23□□□□□ -0.93
SCN4A-201ENST00000435607 ZNF474Q6S9Z5 364 aaPredicted RBP9.23□□□□□ -0.93
SCN4A-201ENST00000435607 SLC25A48Q6ZT89 311 aaKnown RBP9.23□□□□□ -0.93
SCN4A-201ENST00000435607 TRGV9Q99603 122 aa9.23□□□□□ -0.93
SCN4A-201ENST00000435607 TIMM21Q9BVV7 248 aa9.23□□□□□ -0.93
SCN4A-201ENST00000435607 SRSF8Q9BRL6 282 aaKnown RBP9.23□□□□□ -0.93
SCN4A-201ENST00000435607 IMMP2LQ96T52 175 aa9.22□□□□□ -0.93
SCN4A-201ENST00000435607 PMS2P5A8MQ11 134 aa9.22□□□□□ -0.93
SCN4A-201ENST00000435607 DUTP33316 252 aaKnown RBP9.22□□□□□ -0.93
SCN4A-201ENST00000435607 KLRD1Q13241 179 aa9.22□□□□□ -0.93
SCN4A-201ENST00000435607 C2orf82Q6UX34 121 aa9.22□□□□□ -0.93
SCN4A-201ENST00000435607 LINC01590Q5TEZ4 76 aa9.22□□□□□ -0.93
SCN4A-201ENST00000435607 TRPT1Q86TN4 253 aaKnown RBP9.22□□□□□ -0.93
SCN4A-201ENST00000435607 TSKUQ8WUA8 353 aa9.22□□□□□ -0.93
SCN4A-201ENST00000435607 RHPN1-AS1Q9BWJ2 59 aa9.22□□□□□ -0.93
SCN4A-201ENST00000435607 RAMP1O60894 148 aa9.22□□□□□ -0.93
SCN4A-201ENST00000435607 GAGE13Q4V321 117 aa9.22□□□□□ -0.93
SCN4A-201ENST00000435607 SYNJ2BPP57105 145 aa9.22□□□□□ -0.93
SCN4A-201ENST00000435607 MST1LQ2TV78 715 aa9.22□□□□□ -0.93
SCN4A-201ENST00000435607 GNB1LQ9BYB4 327 aa9.22□□□□□ -0.93
SCN4A-201ENST00000435607 DMRT1Q9Y5R6 373 aa9.22□□□□□ -0.93
SCN4A-201ENST00000435607 A0A087WWC5 75 aa9.22□□□□□ -0.93
SCN4A-201ENST00000435607 CD59P13987 128 aa9.22□□□□□ -0.93
SCN4A-201ENST00000435607 DEFB131AP59861 70 aa9.21□□□□□ -0.93
SCN4A-201ENST00000435607 ZFP36L1Q07352 338 aaKnown RBP9.21□□□□□ -0.93
SCN4A-201ENST00000435607 ZNF329Q86UD4 541 aa9.21□□□□□ -0.93
SCN4A-201ENST00000435607 ZNF525Q8N782 197 aa9.21□□□□□ -0.93
SCN4A-201ENST00000435607 CSTL1Q9H114 145 aa9.21□□□□□ -0.93
SCN4A-201ENST00000435607 UBR3Q6ZT12 1888 aa9.21□□□□□ -0.93
SCN4A-201ENST00000435607 IGLV3-12A0A075B6K2 115 aa9.21□□□□□ -0.93
SCN4A-201ENST00000435607 SSBP2P81877 361 aaPredicted RBP9.21□□□□□ -0.93
SCN4A-201ENST00000435607 GAGE2BQ13066 116 aa9.21□□□□□ -0.93
SCN4A-201ENST00000435607 DOCK11Q5JSL3 2073 aa9.21□□□□□ -0.93
SCN4A-201ENST00000435607 CTSBP07858 339 aa9.21□□□□□ -0.93
SCN4A-201ENST00000435607 PYYP10082 97 aa9.21□□□□□ -0.93
SCN4A-201ENST00000435607 PLPPR1Q8TBJ4 325 aa9.21□□□□□ -0.93
SCN4A-201ENST00000435607 TRPM7Q96QT4 1865 aa9.21□□□□□ -0.94
SCN4A-201ENST00000435607 MLNRO43193 412 aa9.21□□□□□ -0.94
SCN4A-201ENST00000435607 HSD52Q0P140 79 aa9.21□□□□□ -0.94
SCN4A-201ENST00000435607 ZNF479Q96JC4 524 aa9.21□□□□□ -0.94
SCN4A-201ENST00000435607 LYPD1Q8N2G4 141 aa9.21□□□□□ -0.94
SCN4A-201ENST00000435607 BPESC1Q9GZL8 116 aa9.21□□□□□ -0.94
SCN4A-201ENST00000435607 A0A0G2JNJ9 132 aa9.21□□□□□ -0.94
SCN4A-201ENST00000435607 BUB1B-PAK6H3BSN5 160 aa9.21□□□□□ -0.94
SCN4A-201ENST00000435607 ZFAND6Q6FIF0 208 aa9.21□□□□□ -0.94
SCN4A-201ENST00000435607 Q9UFV3 132 aa9.21□□□□□ -0.94
SCN4A-201ENST00000435607 ARFGEF1Q9Y6D6 1849 aa9.21□□□□□ -0.94
SCN4A-201ENST00000435607 ADAMTS7Q9UKP4 1686 aa9.21□□□□□ -0.94
SCN4A-201ENST00000435607 ZNF625Q96I27 306 aaPredicted RBP9.2□□□□□ -0.94
SCN4A-201ENST00000435607 DOCK8Q8NF50 2099 aa9.2□□□□□ -0.94
SCN4A-201ENST00000435607 NDPQ00604 133 aa9.2□□□□□ -0.94
SCN4A-201ENST00000435607 MPTX1A8MV57 137 aa9.2□□□□□ -0.94
SCN4A-201ENST00000435607 EFNB3Q15768 340 aa9.2□□□□□ -0.94
SCN4A-201ENST00000435607 SOCS3O14543 225 aa9.2□□□□□ -0.94
SCN4A-201ENST00000435607 SAA4P35542 130 aa9.2□□□□□ -0.94
SCN4A-201ENST00000435607 DSCR8Q96T75 97 aa9.2□□□□□ -0.94
SCN4A-201ENST00000435607 LIME1Q9H400 295 aa9.2□□□□□ -0.94
SCN4A-201ENST00000435607 TRAV25A0A0B4J276 109 aa9.19□□□□□ -0.94
SCN4A-201ENST00000435607 SRRM5B3KS81 715 aa9.19□□□□□ -0.94
SCN4A-201ENST00000435607 A8MXK9 166 aa9.19□□□□□ -0.94
SCN4A-201ENST00000435607 RAMP3O60896 148 aa9.19□□□□□ -0.94
SCN4A-201ENST00000435607 CD200R1LQ6Q8B3 271 aa9.19□□□□□ -0.94
SCN4A-201ENST00000435607 IGHG3P01860 377 aa9.19□□□□□ -0.94
SCN4A-201ENST00000435607 MRAPQ8TCY5 172 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms