RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 TOMM40O96008 361 aa3.65□□□□□ -1.83
LRRK2-204ENST00000430804 IGHV3-48P01763 117 aa3.65□□□□□ -1.83
LRRK2-204ENST00000430804 LYPD2Q6UXB3 125 aa3.65□□□□□ -1.83
LRRK2-204ENST00000430804 NEGR1Q7Z3B1 354 aa3.65□□□□□ -1.83
LRRK2-204ENST00000430804 GVQW1Q8N7I0 195 aa3.65□□□□□ -1.83
LRRK2-204ENST00000430804 GPR146Q96CH1 333 aa3.65□□□□□ -1.83
LRRK2-204ENST00000430804 OVOL2Q9BRP0 275 aa3.65□□□□□ -1.83
LRRK2-204ENST00000430804 HDHD3Q9BSH5 251 aaPredicted RBP3.65□□□□□ -1.83
LRRK2-204ENST00000430804 NINQ8N4C6 2090 aa3.65□□□□□ -1.83
LRRK2-204ENST00000430804 DOPEY2Q9Y3R5 2298 aa3.65□□□□□ -1.83
LRRK2-204ENST00000430804 LRRC37AA6NMS7 1700 aa3.65□□□□□ -1.83
LRRK2-204ENST00000430804 TDRD15B5MCY1 1934 aaKnown RBP3.65□□□□□ -1.83
LRRK2-204ENST00000430804 H3BTX0 84 aa3.65□□□□□ -1.83
LRRK2-204ENST00000430804 FOLR2P14207 255 aa3.65□□□□□ -1.83
LRRK2-204ENST00000430804 GRNP28799 593 aaKnown RBP3.65□□□□□ -1.83
LRRK2-204ENST00000430804 HBBP68871 147 aa3.65□□□□□ -1.83
LRRK2-204ENST00000430804 HGFACQ04756 655 aa3.65□□□□□ -1.83
LRRK2-204ENST00000430804 EGR4Q05215 589 aa3.65□□□□□ -1.83
LRRK2-204ENST00000430804 LYZL2Q7Z4W2 148 aa3.65□□□□□ -1.83
LRRK2-204ENST00000430804 Q9H3A6 140 aa3.65□□□□□ -1.83
LRRK2-204ENST00000430804 A0A1B0GWB2 263 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 H3BVH4 76 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 VCYO14598 125 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 PPBPP02775 128 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 LAMB2P55268 1798 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 H1FOOQ8IZA3 346 aaPredicted RBP3.64□□□□□ -1.83
LRRK2-204ENST00000430804 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.64□□□□□ -1.83
LRRK2-204ENST00000430804 OR10AG1Q8NH19 301 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 F11RQ9Y624 299 aaKnown RBP3.64□□□□□ -1.83
LRRK2-204ENST00000430804 IGKV3D-20A0A0C4DH25 116 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 C1orf100Q5SVJ3 147 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 NCOR1P1Q9H4R4 102 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 PLXNA1Q9UIW2 1896 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 COL5A3P25940 1745 aaPredicted RBP3.64□□□□□ -1.83
LRRK2-204ENST00000430804 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.64□□□□□ -1.83
LRRK2-204ENST00000430804 IGLV2-23P01705 113 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 SNRPCP09234 159 aaKnown RBP3.64□□□□□ -1.83
LRRK2-204ENST00000430804 PLNP26678 52 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 RPL18AQ02543 176 aaKnown RBP3.64□□□□□ -1.83
LRRK2-204ENST00000430804 UBE2V2Q15819 145 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 ZNF497Q6ZNH5 498 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 GTSF1Q8WW33 167 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 FAM131CQ96AQ9 280 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 KAAG1Q9UBP8 84 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 MYO7BQ6PIF6 2116 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 DEFB131BA0A096LNP1 70 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 TRAV26-2A0A0B4J265 109 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 LY6G6EA0A0G2JKS1 128 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 IGHV7-4-1A0A0J9YVY3 117 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 ETDCA0A1B0GVM5 59 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 A0A1W2PP11 408 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 SMIM9A6NGZ8 99 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 SHISA9B4DS77 424 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 F8VVB4 439 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 F8VWA3 439 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 PRR20EP86478 221 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 PRR20CP86479 221 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 PRR20DP86480 221 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 PRR20BP86481 221 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 PRR20AP86496 221 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 SRSF2Q01130 221 aaKnown RBP3.64□□□□□ -1.83
LRRK2-204ENST00000430804 DEFB135Q30KP9 77 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 LBHQ53QV2 105 aaPredicted RBP3.64□□□□□ -1.83
LRRK2-204ENST00000430804 ZNF880Q6PDB4 577 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 IGHV1OR15-1A0A075B7D0 117 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 TRAV8-3A0A0A6YYJ7 113 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 C7orf71A4D174 169 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 VGLL3A8MV65 326 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 CXCL2P19875 107 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 NDPQ00604 133 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 SRSF1Q07955 248 aaKnown RBP eCLIP3.64□□□□□ -1.83
LRRK2-204ENST00000430804 RBMY1FQ15415 496 aaKnown RBP3.64□□□□□ -1.83
LRRK2-204ENST00000430804 TMEM88Q6PEY1 159 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 Q6ZNX1 250 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 PAM16Q9Y3D7 125 aa3.64□□□□□ -1.83
LRRK2-204ENST00000430804 IGHV1-24A0A0C4DH33 117 aa3.63□□□□□ -1.83
LRRK2-204ENST00000430804 IGLL1P15814 213 aa3.63□□□□□ -1.83
LRRK2-204ENST00000430804 MDKP21741 143 aaPredicted RBP3.63□□□□□ -1.83
LRRK2-204ENST00000430804 NHLRC3Q5JS37 347 aa3.63□□□□□ -1.83
LRRK2-204ENST00000430804 RPRMLQ8N4K4 120 aa3.63□□□□□ -1.83
LRRK2-204ENST00000430804 OR11H7Q8NGC8 314 aa3.63□□□□□ -1.83
LRRK2-204ENST00000430804 VAMP8Q9BV40 100 aa3.63□□□□□ -1.83
LRRK2-204ENST00000430804 LY96Q9Y6Y9 160 aa3.63□□□□□ -1.83
LRRK2-204ENST00000430804 MCM3APO60318 1980 aa3.63□□□□□ -1.83
LRRK2-204ENST00000430804 IGHV3-73A0A0B4J1V6 119 aa3.63□□□□□ -1.83
LRRK2-204ENST00000430804 PRSS29PA6NIE9 313 aa3.63□□□□□ -1.83
LRRK2-204ENST00000430804 LOXP28300 417 aaPredicted RBP3.63□□□□□ -1.83
LRRK2-204ENST00000430804 FAAP20Q6NZ36 180 aa3.63□□□□□ -1.83
LRRK2-204ENST00000430804 TRPT1Q86TN4 253 aaKnown RBP3.63□□□□□ -1.83
LRRK2-204ENST00000430804 NAA50Q9GZZ1 169 aaKnown RBP3.63□□□□□ -1.83
LRRK2-204ENST00000430804 MS4A6AQ9H2W1 248 aa3.63□□□□□ -1.83
LRRK2-204ENST00000430804 LAMTOR3Q9UHA4 124 aa3.63□□□□□ -1.83
LRRK2-204ENST00000430804 LRCOL1A6NCL2 159 aa3.63□□□□□ -1.83
LRRK2-204ENST00000430804 DIRC3C9JPN6 131 aa3.63□□□□□ -1.83
LRRK2-204ENST00000430804 H0YJW9 148 aa3.63□□□□□ -1.83
LRRK2-204ENST00000430804 FAM229AH3BQW9 127 aa3.63□□□□□ -1.83
LRRK2-204ENST00000430804 CTDSPLO15194 276 aa3.63□□□□□ -1.83
LRRK2-204ENST00000430804 LINC00299Q6ZSB3 139 aa3.63□□□□□ -1.83
LRRK2-204ENST00000430804 PYGO2Q9BRQ0 406 aa3.63□□□□□ -1.83
LRRK2-204ENST00000430804 MYO18AQ92614 2054 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms