RNA–Protein interactions for RNA: ENST00000429456.1

LINC01238-203, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 2,170 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-203ENST00000429456 APELAP0DMC3 54 aa9.17□□□□□ -0.94
LINC01238-203ENST00000429456 HBBP68871 147 aa9.17□□□□□ -0.94
LINC01238-203ENST00000429456 COL5A1-AS1Q5SY13 56 aa9.17□□□□□ -0.94
LINC01238-203ENST00000429456 MALRD1Q5VYJ5 2156 aa9.17□□□□□ -0.94
LINC01238-203ENST00000429456 EBLN2Q6P2I7 272 aa9.17□□□□□ -0.94
LINC01238-203ENST00000429456 KLHDC1Q8N7A1 406 aa9.17□□□□□ -0.94
LINC01238-203ENST00000429456 OR8B3Q8NGG8 313 aa9.17□□□□□ -0.94
LINC01238-203ENST00000429456 URB1-AS1Q96HZ7 61 aa9.17□□□□□ -0.94
LINC01238-203ENST00000429456 OR8B2Q96RD0 313 aa9.17□□□□□ -0.94
LINC01238-203ENST00000429456 TMUB1Q9BVT8 246 aa9.17□□□□□ -0.94
LINC01238-203ENST00000429456 F11RQ9Y624 299 aaKnown RBP9.17□□□□□ -0.94
LINC01238-203ENST00000429456 PKDREJQ9NTG1 2253 aa9.17□□□□□ -0.94
LINC01238-203ENST00000429456 IGHV1-3A0A0C4DH29 117 aa9.16□□□□□ -0.94
LINC01238-203ENST00000429456 IGHV1-69-2A0A0G2JMI3 117 aa9.16□□□□□ -0.94
LINC01238-203ENST00000429456 GOSR1O95249 250 aa9.16□□□□□ -0.94
LINC01238-203ENST00000429456 LEMD1Q68G75 181 aa9.16□□□□□ -0.94
LINC01238-203ENST00000429456 LCN12Q6JVE5 192 aa9.16□□□□□ -0.94
LINC01238-203ENST00000429456 RNASEKQ6P5S7 137 aaKnown RBP9.16□□□□□ -0.94
LINC01238-203ENST00000429456 GTSF1Q8WW33 167 aa9.16□□□□□ -0.94
LINC01238-203ENST00000429456 GSX1Q9H4S2 264 aaPredicted RBP9.16□□□□□ -0.94
LINC01238-203ENST00000429456 SOX21Q9Y651 276 aaPredicted RBP9.16□□□□□ -0.94
LINC01238-203ENST00000429456 SMG1Q96Q15 3661 aaKnown RBP9.16□□□□□ -0.94
LINC01238-203ENST00000429456 C2orf70A6NJV1 201 aa9.16□□□□□ -0.94
LINC01238-203ENST00000429456 H3BTX0 84 aa9.16□□□□□ -0.94
LINC01238-203ENST00000429456 P01737 135 aa9.16□□□□□ -0.94
LINC01238-203ENST00000429456 DLX1P56177 255 aa9.16□□□□□ -0.94
LINC01238-203ENST00000429456 GFRALQ6UXV0 394 aa9.16□□□□□ -0.94
LINC01238-203ENST00000429456 Q6ZN92 141 aa9.16□□□□□ -0.94
LINC01238-203ENST00000429456 OR2D3Q8NGH3 330 aa9.16□□□□□ -0.94
LINC01238-203ENST00000429456 TXN2Q99757 166 aa9.16□□□□□ -0.94
LINC01238-203ENST00000429456 GFRA4Q9GZZ7 299 aa9.16□□□□□ -0.94
LINC01238-203ENST00000429456 HIGD1AQ9Y241 93 aa9.16□□□□□ -0.94
LINC01238-203ENST00000429456 ZNF835Q9Y2P0 537 aa9.16□□□□□ -0.94
LINC01238-203ENST00000429456 GOLT1BQ9Y3E0 138 aa9.16□□□□□ -0.94
LINC01238-203ENST00000429456 CEP250Q9BV73 2442 aa9.15□□□□□ -0.94
LINC01238-203ENST00000429456 PCNX1Q96RV3 2341 aa9.15□□□□□ -0.94
LINC01238-203ENST00000429456 BUB1B-PAK6H3BSN5 160 aa9.15□□□□□ -0.94
LINC01238-203ENST00000429456 NPSP0C0P6 89 aa9.15□□□□□ -0.94
LINC01238-203ENST00000429456 IGLC1P0CG04 106 aa9.15□□□□□ -0.94
LINC01238-203ENST00000429456 HNRNPA3P51991 378 aaKnown RBP9.15□□□□□ -0.94
LINC01238-203ENST00000429456 PPP1R27Q86WC6 154 aa9.15□□□□□ -0.94
LINC01238-203ENST00000429456 ATOH7Q8N100 152 aa9.15□□□□□ -0.94
LINC01238-203ENST00000429456 Q8NA96 180 aa9.15□□□□□ -0.94
LINC01238-203ENST00000429456 ABHD17AQ96GS6 310 aa9.15□□□□□ -0.94
LINC01238-203ENST00000429456 NGBQ9NPG2 151 aa9.15□□□□□ -0.94
LINC01238-203ENST00000429456 OTORQ9NRC9 128 aa9.15□□□□□ -0.94
LINC01238-203ENST00000429456 TMEM14CQ9P0S9 112 aa9.15□□□□□ -0.94
LINC01238-203ENST00000429456 RALYQ9UKM9 306 aaKnown RBP9.15□□□□□ -0.94
LINC01238-203ENST00000429456 INSIG2Q9Y5U4 225 aa9.15□□□□□ -0.94
LINC01238-203ENST00000429456 NPIPB6E9PJ23 425 aa9.14□□□□□ -0.95
LINC01238-203ENST00000429456 NDUFS8O00217 210 aa9.14□□□□□ -0.95
LINC01238-203ENST00000429456 PSG1P11464 419 aa9.14□□□□□ -0.95
LINC01238-203ENST00000429456 FAM162BQ5T6X4 162 aa9.14□□□□□ -0.95
LINC01238-203ENST00000429456 PGLYRP4Q96LB8 373 aa9.14□□□□□ -0.95
LINC01238-203ENST00000429456 CLUHP3Q96NS8 147 aa9.14□□□□□ -0.95
LINC01238-203ENST00000429456 TRAV9-2A0A087WT02 112 aa9.14□□□□□ -0.95
LINC01238-203ENST00000429456 C20orf202A1L168 122 aa9.14□□□□□ -0.95
LINC01238-203ENST00000429456 FAM231BA6NCW3 169 aa9.14□□□□□ -0.95
LINC01238-203ENST00000429456 I3L2K1 104 aa9.14□□□□□ -0.95
LINC01238-203ENST00000429456 APOBEC3AP31941 199 aaPredicted RBP9.14□□□□□ -0.95
LINC01238-203ENST00000429456 TFPI2P48307 235 aa9.14□□□□□ -0.95
LINC01238-203ENST00000429456 LYZP61626 148 aa9.14□□□□□ -0.95
LINC01238-203ENST00000429456 PRB3Q04118 309 aaPredicted RBP9.14□□□□□ -0.95
LINC01238-203ENST00000429456 FAM120AOSQ5T036 256 aa9.14□□□□□ -0.95
LINC01238-203ENST00000429456 RBPMS2Q6ZRY4 209 aaKnown RBP9.14□□□□□ -0.95
LINC01238-203ENST00000429456 Q86TA4 180 aa9.14□□□□□ -0.95
LINC01238-203ENST00000429456 SLC25A39Q9BZJ4 359 aaPredicted RBP9.14□□□□□ -0.95
LINC01238-203ENST00000429456 LAMTOR2Q9Y2Q5 125 aa9.14□□□□□ -0.95
LINC01238-203ENST00000429456 BSNQ9UPA5 3926 aa9.14□□□□□ -0.95
LINC01238-203ENST00000429456 IGLV2-11P01706 119 aa9.13□□□□□ -0.95
LINC01238-203ENST00000429456 HOXB4P17483 251 aaPredicted RBP9.13□□□□□ -0.95
LINC01238-203ENST00000429456 RBPJQ06330 500 aa9.13□□□□□ -0.95
LINC01238-203ENST00000429456 Q56UQ5 140 aa9.13□□□□□ -0.95
LINC01238-203ENST00000429456 PRR31Q5SQ13 230 aa9.13□□□□□ -0.95
LINC01238-203ENST00000429456 KIR3DL3Q8N743 410 aa9.13□□□□□ -0.95
LINC01238-203ENST00000429456 STPG4Q8N801 248 aa9.13□□□□□ -0.95
LINC01238-203ENST00000429456 DAZAP1Q96EP5 407 aaKnown RBP9.13□□□□□ -0.95
LINC01238-203ENST00000429456 FBXL15Q9H469 300 aa9.13□□□□□ -0.95
LINC01238-203ENST00000429456 B9A039 149 aa9.13□□□□□ -0.95
LINC01238-203ENST00000429456 TSPOP30536 169 aa9.13□□□□□ -0.95
LINC01238-203ENST00000429456 SPATA12Q7Z6I5 190 aa9.13□□□□□ -0.95
LINC01238-203ENST00000429456 SRSF12Q8WXF0 261 aaKnown RBP9.13□□□□□ -0.95
LINC01238-203ENST00000429456 CHCHD1Q96BP2 118 aaKnown RBP9.13□□□□□ -0.95
LINC01238-203ENST00000429456 ZFP30Q9Y2G7 519 aa9.13□□□□□ -0.95
LINC01238-203ENST00000429456 MRPS16Q9Y3D3 137 aaKnown RBP9.13□□□□□ -0.95
LINC01238-203ENST00000429456 MGAQ8IWI9 3026 aa9.12□□□□□ -0.95
LINC01238-203ENST00000429456 TRBV6-1A0A0K0K1D8 114 aa9.12□□□□□ -0.95
LINC01238-203ENST00000429456 J3KRW8 73 aa9.12□□□□□ -0.95
LINC01238-203ENST00000429456 LINC00614P0C842 121 aa9.12□□□□□ -0.95
LINC01238-203ENST00000429456 CD24P25063 80 aa9.12□□□□□ -0.95
LINC01238-203ENST00000429456 CIARTQ8N365 385 aaPredicted RBP9.12□□□□□ -0.95
LINC01238-203ENST00000429456 RNF5Q99942 180 aa9.12□□□□□ -0.95
LINC01238-203ENST00000429456 CLEC5AQ9NY25 188 aa9.12□□□□□ -0.95
LINC01238-203ENST00000429456 C1RLQ9NZP8 487 aa9.12□□□□□ -0.95
LINC01238-203ENST00000429456 DMXL1Q9Y485 3027 aa9.12□□□□□ -0.95
LINC01238-203ENST00000429456 LAMA5O15230 3695 aa9.12□□□□□ -0.95
LINC01238-203ENST00000429456 TRAV8-1A0A0A6YYK1 113 aa9.12□□□□□ -0.95
LINC01238-203ENST00000429456 SH2D7A6NKC9 451 aaPredicted RBP9.12□□□□□ -0.95
LINC01238-203ENST00000429456 LY6LH3BQJ8 138 aa9.12□□□□□ -0.95
LINC01238-203ENST00000429456 RBP4P02753 201 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms