RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 GAFA1Q96PS6 74 aa10.48□□□□□ -0.73
LDB3-205ENST00000429277 RPRMLQ8N4K4 120 aa10.48□□□□□ -0.73
LDB3-205ENST00000429277 RTTNQ86VV8 2226 aa10.48□□□□□ -0.73
LDB3-205ENST00000429277 SIGLEC9Q9Y336 463 aa10.48□□□□□ -0.73
LDB3-205ENST00000429277 SBF2Q86WG5 1849 aa10.48□□□□□ -0.73
LDB3-205ENST00000429277 TRAV8-4A0A0B4J246 113 aa10.48□□□□□ -0.73
LDB3-205ENST00000429277 IGHV4-39P01824 125 aa10.48□□□□□ -0.73
LDB3-205ENST00000429277 PPIFP30405 207 aaKnown RBP10.48□□□□□ -0.73
LDB3-205ENST00000429277 SUPT4H1P63272 117 aaKnown RBP10.48□□□□□ -0.73
LDB3-205ENST00000429277 ZNF876PQ49A33 203 aa10.48□□□□□ -0.73
LDB3-205ENST00000429277 ATRAIDQ6UW56 229 aa10.48□□□□□ -0.73
LDB3-205ENST00000429277 MGST2Q99735 147 aa10.48□□□□□ -0.73
LDB3-205ENST00000429277 CST9LQ9H4G1 147 aa10.48□□□□□ -0.73
LDB3-205ENST00000429277 RALGAPA1Q6GYQ0 2036 aa10.48□□□□□ -0.73
LDB3-205ENST00000429277 WNK3Q9BYP7 1800 aa10.48□□□□□ -0.73
LDB3-205ENST00000429277 DOCK4Q8N1I0 1966 aa10.48□□□□□ -0.73
LDB3-205ENST00000429277 IGKV1-27A0A075B6S5 117 aa10.48□□□□□ -0.73
LDB3-205ENST00000429277 CD33P20138 364 aa10.48□□□□□ -0.73
LDB3-205ENST00000429277 PSG3Q16557 428 aa10.48□□□□□ -0.73
LDB3-205ENST00000429277 LINC01356Q8N9X3 169 aa10.48□□□□□ -0.73
LDB3-205ENST00000429277 PNRC2Q9NPJ4 139 aaKnown RBP10.48□□□□□ -0.73
LDB3-205ENST00000429277 IGKV2-40A0A087WW87 121 aaPredicted RBP10.47□□□□□ -0.73
LDB3-205ENST00000429277 SRRM4A7MD48 611 aaKnown RBP10.47□□□□□ -0.73
LDB3-205ENST00000429277 IGKV2D-40P01614 121 aaPredicted RBP10.47□□□□□ -0.73
LDB3-205ENST00000429277 EVI2AP22794 236 aa10.47□□□□□ -0.73
LDB3-205ENST00000429277 C3orf36Q3SXR2 165 aa10.47□□□□□ -0.73
LDB3-205ENST00000429277 GFI1BQ5VTD9 330 aa10.47□□□□□ -0.73
LDB3-205ENST00000429277 SCRT1Q9BWW7 348 aa10.47□□□□□ -0.73
LDB3-205ENST00000429277 SCN8AQ9UQD0 1980 aa10.47□□□□□ -0.73
LDB3-205ENST00000429277 TRAV5A0A0B4J249 113 aa10.47□□□□□ -0.73
LDB3-205ENST00000429277 C10orf55Q5SWW7 151 aa10.47□□□□□ -0.73
LDB3-205ENST00000429277 LINC01551Q86U37 167 aa10.47□□□□□ -0.73
LDB3-205ENST00000429277 A0A0G2JNJ9 132 aa10.47□□□□□ -0.73
LDB3-205ENST00000429277 Q9UFV3 132 aa10.47□□□□□ -0.73
LDB3-205ENST00000429277 TNFSF13O75888 250 aa10.47□□□□□ -0.73
LDB3-205ENST00000429277 IGKV1-5P01602 117 aa10.47□□□□□ -0.73
LDB3-205ENST00000429277 PRTN3P24158 256 aa10.47□□□□□ -0.73
LDB3-205ENST00000429277 MRPL27Q9P0M9 148 aaKnown RBP10.47□□□□□ -0.73
LDB3-205ENST00000429277 SCN2AQ99250 2005 aa10.47□□□□□ -0.73
LDB3-205ENST00000429277 INTS1Q8N201 2190 aaKnown RBP10.46□□□□□ -0.73
LDB3-205ENST00000429277 TFF1P04155 84 aa10.46□□□□□ -0.73
LDB3-205ENST00000429277 FOXG1P55316 489 aaPredicted RBP10.46□□□□□ -0.73
LDB3-205ENST00000429277 CD300EQ496F6 205 aaPredicted RBP10.46□□□□□ -0.73
LDB3-205ENST00000429277 Q6P435 159 aa10.46□□□□□ -0.73
LDB3-205ENST00000429277 PIP4P2Q8N4L2 257 aa10.46□□□□□ -0.73
LDB3-205ENST00000429277 VSIRQ9H7M9 311 aa10.46□□□□□ -0.73
LDB3-205ENST00000429277 LGALS1P09382 135 aaKnown RBP10.46□□□□□ -0.74
LDB3-205ENST00000429277 RPL15P61313 204 aaKnown RBP10.46□□□□□ -0.74
LDB3-205ENST00000429277 LYZL1Q6UWQ5 148 aa10.46□□□□□ -0.74
LDB3-205ENST00000429277 ABCA7Q8IZY2 2146 aa10.46□□□□□ -0.74
LDB3-205ENST00000429277 BRWD3Q6RI45 1802 aa10.46□□□□□ -0.74
LDB3-205ENST00000429277 TRAV12-3A0A0B4J271 114 aa10.45□□□□□ -0.74
LDB3-205ENST00000429277 D6R8Y8 96 aa10.45□□□□□ -0.74
LDB3-205ENST00000429277 PRB3Q04118 309 aaPredicted RBP10.45□□□□□ -0.74
LDB3-205ENST00000429277 UNQ6494/PRO21346Q6UXR6 183 aa10.45□□□□□ -0.74
LDB3-205ENST00000429277 HIST1H2BLQ99880 126 aa10.45□□□□□ -0.74
LDB3-205ENST00000429277 TRGV1A0A0A0MS02 117 aa10.45□□□□□ -0.74
LDB3-205ENST00000429277 CLPSP04118 112 aa10.45□□□□□ -0.74
LDB3-205ENST00000429277 GZMBP10144 247 aa10.45□□□□□ -0.74
LDB3-205ENST00000429277 GFRA4Q9GZZ7 299 aa10.45□□□□□ -0.74
LDB3-205ENST00000429277 NCOR1P1Q9H4R4 102 aa10.45□□□□□ -0.74
LDB3-205ENST00000429277 DAZ1Q9NQZ3 744 aaKnown RBP10.45□□□□□ -0.74
LDB3-205ENST00000429277 LCN12Q6JVE5 192 aa10.45□□□□□ -0.74
LDB3-205ENST00000429277 ASCL4Q6XD76 172 aa10.45□□□□□ -0.74
LDB3-205ENST00000429277 RPP25LQ8N5L8 163 aaKnown RBP10.45□□□□□ -0.74
LDB3-205ENST00000429277 CYTL1Q9NRR1 136 aa10.45□□□□□ -0.74
LDB3-205ENST00000429277 EP300Q09472 2414 aaPredicted RBP10.45□□□□□ -0.74
LDB3-205ENST00000429277 ALPK2Q86TB3 2170 aa10.44□□□□□ -0.74
LDB3-205ENST00000429277 SH2D1AO60880 128 aa10.44□□□□□ -0.74
LDB3-205ENST00000429277 NDUFB8O95169 186 aa10.44□□□□□ -0.74
LDB3-205ENST00000429277 SELLP14151 372 aa10.44□□□□□ -0.74
LDB3-205ENST00000429277 SRSF3P84103 164 aaKnown RBP10.44□□□□□ -0.74
LDB3-205ENST00000429277 GAGE13Q4V321 117 aa10.44□□□□□ -0.74
LDB3-205ENST00000429277 EXOC3-AS1Q8N2X6 119 aa10.44□□□□□ -0.74
LDB3-205ENST00000429277 SRSF4Q08170 494 aaKnown RBP10.44□□□□□ -0.74
LDB3-205ENST00000429277 Q0VFX4 171 aa10.44□□□□□ -0.74
LDB3-205ENST00000429277 ERCC8Q13216 396 aa10.44□□□□□ -0.74
LDB3-205ENST00000429277 TMEM219Q86XT9 240 aa10.44□□□□□ -0.74
LDB3-205ENST00000429277 LINC00527Q9UJ94 153 aa10.44□□□□□ -0.74
LDB3-205ENST00000429277 DICER1Q9UPY3 1922 aaKnown RBP10.44□□□□□ -0.74
LDB3-205ENST00000429277 MYMXA0A1B0GTQ4 84 aa10.44□□□□□ -0.74
LDB3-205ENST00000429277 RHODO00212 210 aa10.44□□□□□ -0.74
LDB3-205ENST00000429277 GNLYP22749 145 aa10.44□□□□□ -0.74
LDB3-205ENST00000429277 SAMD5Q5TGI4 173 aa10.44□□□□□ -0.74
LDB3-205ENST00000429277 BMPERQ8N8U9 685 aa10.44□□□□□ -0.74
LDB3-205ENST00000429277 A0A087WV48 116 aa10.44□□□□□ -0.74
LDB3-205ENST00000429277 F8WEM9 126 aa10.44□□□□□ -0.74
LDB3-205ENST00000429277 CDK2AP2O75956 126 aa10.44□□□□□ -0.74
LDB3-205ENST00000429277 B3GALT5-AS1P59052 145 aa10.44□□□□□ -0.74
LDB3-205ENST00000429277 KLRD1Q13241 179 aa10.44□□□□□ -0.74
LDB3-205ENST00000429277 KLF17Q5JT82 389 aaPredicted RBP10.44□□□□□ -0.74
LDB3-205ENST00000429277 HIST3H2BBQ8N257 126 aa10.44□□□□□ -0.74
LDB3-205ENST00000429277 PAX4O43316 350 aa10.43□□□□□ -0.74
LDB3-205ENST00000429277 SRD5A1P18405 259 aa10.43□□□□□ -0.74
LDB3-205ENST00000429277 MRPL52Q86TS9 123 aaKnown RBP10.43□□□□□ -0.74
LDB3-205ENST00000429277 DNAJC30Q96LL9 226 aa10.43□□□□□ -0.74
LDB3-205ENST00000429277 MSRB2Q9Y3D2 182 aa10.43□□□□□ -0.74
LDB3-205ENST00000429277 SPATA31B1PQ5VZV4 182 aa10.43□□□□□ -0.74
LDB3-205ENST00000429277 FNDC4Q9H6D8 234 aaPredicted RBP10.43□□□□□ -0.74
LDB3-205ENST00000429277 RHPN1-AS1Q9BWJ2 59 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms