RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 ITPR3Q14573 2671 aa9.21□□□□□ -0.94
CECR3-201ENST00000428828 IGHV4-61A0A0C4DH41 118 aa9.21□□□□□ -0.94
CECR3-201ENST00000428828 SERTM2A0A1B0GWG4 89 aa9.21□□□□□ -0.94
CECR3-201ENST00000428828 VWC2LB2RUY7 222 aa9.21□□□□□ -0.94
CECR3-201ENST00000428828 TNFRSF13BO14836 293 aaPredicted RBP9.21□□□□□ -0.94
CECR3-201ENST00000428828 FCN3O75636 299 aa9.21□□□□□ -0.94
CECR3-201ENST00000428828 FRMD6-AS1P0C7T7 363 aa9.21□□□□□ -0.94
CECR3-201ENST00000428828 P0C879 139 aa9.21□□□□□ -0.94
CECR3-201ENST00000428828 GATA2P23769 480 aaPredicted RBP9.21□□□□□ -0.94
CECR3-201ENST00000428828 DSCR9P59020 149 aa9.21□□□□□ -0.94
CECR3-201ENST00000428828 PLP1P60201 277 aa9.21□□□□□ -0.94
CECR3-201ENST00000428828 RPL31P62899 125 aaKnown RBP9.21□□□□□ -0.94
CECR3-201ENST00000428828 RAB31Q13636 194 aa9.21□□□□□ -0.94
CECR3-201ENST00000428828 CD300EQ496F6 205 aaPredicted RBP9.21□□□□□ -0.94
CECR3-201ENST00000428828 ZNF585BQ52M93 769 aa9.21□□□□□ -0.94
CECR3-201ENST00000428828 FOXI2Q6ZQN5 318 aa9.21□□□□□ -0.94
CECR3-201ENST00000428828 CHCHD1Q96BP2 118 aaKnown RBP9.21□□□□□ -0.94
CECR3-201ENST00000428828 SPATA25Q9BR10 227 aa9.21□□□□□ -0.94
CECR3-201ENST00000428828 TNFRSF19Q9NS68 423 aa9.21□□□□□ -0.94
CECR3-201ENST00000428828 SYS1-DBNDD2H3BUS1 97 aa9.2□□□□□ -0.94
CECR3-201ENST00000428828 J3QR89 54 aa9.2□□□□□ -0.94
CECR3-201ENST00000428828 RAB9AP51151 201 aa9.2□□□□□ -0.94
CECR3-201ENST00000428828 SLC35E4Q6ICL7 350 aa9.2□□□□□ -0.94
CECR3-201ENST00000428828 KRTAP1-3Q8IUG1 177 aa9.2□□□□□ -0.94
CECR3-201ENST00000428828 MAPK1IP1LQ8NDC0 245 aa9.2□□□□□ -0.94
CECR3-201ENST00000428828 WFDC11Q8NEX6 87 aa9.2□□□□□ -0.94
CECR3-201ENST00000428828 PPP1R35Q8TAP8 253 aa9.2□□□□□ -0.94
CECR3-201ENST00000428828 OR2D2Q9H210 308 aa9.2□□□□□ -0.94
CECR3-201ENST00000428828 ZNF331Q9NQX6 463 aaPredicted RBP9.2□□□□□ -0.94
CECR3-201ENST00000428828 KAAG1Q9UBP8 84 aa9.2□□□□□ -0.94
CECR3-201ENST00000428828 MALRD1Q5VYJ5 2156 aa9.19□□□□□ -0.94
CECR3-201ENST00000428828 RNF223E7ERA6 249 aa9.19□□□□□ -0.94
CECR3-201ENST00000428828 FSTL3O95633 263 aa9.19□□□□□ -0.94
CECR3-201ENST00000428828 COX8AP10176 69 aa9.19□□□□□ -0.94
CECR3-201ENST00000428828 SLC25A16P16260 332 aa9.19□□□□□ -0.94
CECR3-201ENST00000428828 KIAA1644Q3SXP7 199 aa9.19□□□□□ -0.94
CECR3-201ENST00000428828 TMEM97Q5BJF2 176 aa9.19□□□□□ -0.94
CECR3-201ENST00000428828 FA2HQ7L5A8 372 aa9.19□□□□□ -0.94
CECR3-201ENST00000428828 S100A7AQ86SG5 101 aa9.19□□□□□ -0.94
CECR3-201ENST00000428828 OR51H1Q8NH63 302 aa9.19□□□□□ -0.94
CECR3-201ENST00000428828 VSTM2AQ8TAG5 236 aa9.19□□□□□ -0.94
CECR3-201ENST00000428828 COQ2Q96H96 371 aa9.19□□□□□ -0.94
CECR3-201ENST00000428828 GPHA2Q96T91 129 aa9.19□□□□□ -0.94
CECR3-201ENST00000428828 MED13LQ71F56 2210 aa9.19□□□□□ -0.94
CECR3-201ENST00000428828 WNK2Q9Y3S1 2297 aa9.19□□□□□ -0.94
CECR3-201ENST00000428828 F2RL2O00254 374 aa9.19□□□□□ -0.94
CECR3-201ENST00000428828 MGST3O14880 152 aa9.19□□□□□ -0.94
CECR3-201ENST00000428828 HBZP02008 142 aa9.19□□□□□ -0.94
CECR3-201ENST00000428828 CKS1BP61024 79 aa9.19□□□□□ -0.94
CECR3-201ENST00000428828 IZUMO4Q1ZYL8 232 aa9.19□□□□□ -0.94
CECR3-201ENST00000428828 FAM120AOSQ5T036 256 aa9.19□□□□□ -0.94
CECR3-201ENST00000428828 GRAMD2BQ96HH9 432 aa9.19□□□□□ -0.94
CECR3-201ENST00000428828 DCTN5Q9BTE1 182 aa9.19□□□□□ -0.94
CECR3-201ENST00000428828 SSBP3Q9BWW4 388 aaPredicted RBP9.19□□□□□ -0.94
CECR3-201ENST00000428828 KCNIP1Q9NZI2 227 aa9.19□□□□□ -0.94
CECR3-201ENST00000428828 MYO9AB2RTY4 2548 aa9.18□□□□□ -0.94
CECR3-201ENST00000428828 IGLV2-14P01704 120 aa9.18□□□□□ -0.94
CECR3-201ENST00000428828 OR9G9P0C7N8 305 aa9.18□□□□□ -0.94
CECR3-201ENST00000428828 ARL14EPLP0DKL9 152 aa9.18□□□□□ -0.94
CECR3-201ENST00000428828 USF1P22415 310 aaPredicted RBP9.18□□□□□ -0.94
CECR3-201ENST00000428828 CRYBA4P53673 196 aa9.18□□□□□ -0.94
CECR3-201ENST00000428828 LMO4P61968 165 aa9.18□□□□□ -0.94
CECR3-201ENST00000428828 ZNF841Q6ZN19 808 aa9.18□□□□□ -0.94
CECR3-201ENST00000428828 OR10AG1Q8NH19 301 aa9.18□□□□□ -0.94
CECR3-201ENST00000428828 MRAP2Q96G30 205 aa9.18□□□□□ -0.94
CECR3-201ENST00000428828 FOXC2Q99958 501 aa9.18□□□□□ -0.94
CECR3-201ENST00000428828 FAM234AQ9H0X4 552 aa9.18□□□□□ -0.94
CECR3-201ENST00000428828 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.18□□□□□ -0.94
CECR3-201ENST00000428828 TECRQ9NZ01 308 aaKnown RBP9.18□□□□□ -0.94
CECR3-201ENST00000428828 TRAPPC2LQ9UL33 140 aa9.18□□□□□ -0.94
CECR3-201ENST00000428828 NOTCH2Q04721 2471 aa9.18□□□□□ -0.94
CECR3-201ENST00000428828 FLNAP21333 2647 aaKnown RBP9.18□□□□□ -0.94
CECR3-201ENST00000428828 TMEM30CPA0ZSE6 113 aa9.17□□□□□ -0.94
CECR3-201ENST00000428828 HTR1DP28221 377 aa9.17□□□□□ -0.94
CECR3-201ENST00000428828 GNG4P50150 75 aa9.17□□□□□ -0.94
CECR3-201ENST00000428828 ZNF497Q6ZNH5 498 aa9.17□□□□□ -0.94
CECR3-201ENST00000428828 C2orf91Q6ZV80 131 aa9.17□□□□□ -0.94
CECR3-201ENST00000428828 ATP5L2Q7Z4Y8 100 aa9.17□□□□□ -0.94
CECR3-201ENST00000428828 SPATA12Q7Z6I5 190 aa9.17□□□□□ -0.94
CECR3-201ENST00000428828 BPIFA4PQ86YQ2 179 aa9.17□□□□□ -0.94
CECR3-201ENST00000428828 ZNF645Q8N7E2 425 aa9.17□□□□□ -0.94
CECR3-201ENST00000428828 ZBTB34Q8NCN2 500 aa9.17□□□□□ -0.94
CECR3-201ENST00000428828 UBALD1Q8TB05 177 aa9.17□□□□□ -0.94
CECR3-201ENST00000428828 YTHDF2Q9Y5A9 579 aaKnown RBP9.17□□□□□ -0.94
CECR3-201ENST00000428828 AKAP9Q99996 3911 aa9.17□□□□□ -0.94
CECR3-201ENST00000428828 TRAV26-1A0A087WT03 109 aa9.17□□□□□ -0.94
CECR3-201ENST00000428828 GAGE12HA6NDE8 117 aa9.17□□□□□ -0.94
CECR3-201ENST00000428828 RAB29O14966 203 aa9.17□□□□□ -0.94
CECR3-201ENST00000428828 SIVA1O15304 175 aa9.17□□□□□ -0.94
CECR3-201ENST00000428828 GCHFRP30047 84 aa9.17□□□□□ -0.94
CECR3-201ENST00000428828 SLAQ13239 276 aa9.17□□□□□ -0.94
CECR3-201ENST00000428828 TIGITQ495A1 244 aa9.17□□□□□ -0.94
CECR3-201ENST00000428828 FNDC4Q9H6D8 234 aaPredicted RBP9.17□□□□□ -0.94
CECR3-201ENST00000428828 ZANQ9Y493 2812 aa9.17□□□□□ -0.94
CECR3-201ENST00000428828 A0A0G2JLM5 398 aa9.16□□□□□ -0.94
CECR3-201ENST00000428828 A0A1W2PPM0 123 aa9.16□□□□□ -0.94
CECR3-201ENST00000428828 TSPAN13O95857 204 aa9.16□□□□□ -0.94
CECR3-201ENST00000428828 HIST1H1EP10412 219 aaKnown RBP9.16□□□□□ -0.94
CECR3-201ENST00000428828 ZFP36P26651 326 aaKnown RBP9.16□□□□□ -0.94
CECR3-201ENST00000428828 FAM231DQ6ZW35 169 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms