RNA–Protein interactions for RNA: ENST00000425537.1

HMGB4-201, Transcript of high mobility group box 4, humanhuman

TSL 1 (best)

Gene HMGB4, Length 630 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-201ENST00000425537 CNN1P51911 297 aaKnown RBP7.42□□□□□ -1.22
HMGB4-201ENST00000425537 TAS2R60P59551 318 aa7.42□□□□□ -1.22
HMGB4-201ENST00000425537 RAB5BP61020 215 aa7.42□□□□□ -1.22
HMGB4-201ENST00000425537 RPL23P62829 140 aaKnown RBP7.42□□□□□ -1.22
HMGB4-201ENST00000425537 SUMO1P63165 101 aaKnown RBP7.42□□□□□ -1.22
HMGB4-201ENST00000425537 RHOGP84095 191 aa7.42□□□□□ -1.22
HMGB4-201ENST00000425537 RPL19P84098 196 aaKnown RBP7.42□□□□□ -1.22
HMGB4-201ENST00000425537 RELQ04864 619 aaPredicted RBP7.42□□□□□ -1.22
HMGB4-201ENST00000425537 ATP5G2Q06055 141 aa7.42□□□□□ -1.22
HMGB4-201ENST00000425537 KLF17Q5JT82 389 aaPredicted RBP7.42□□□□□ -1.22
HMGB4-201ENST00000425537 C9orf152Q5JTZ5 239 aa7.42□□□□□ -1.22
HMGB4-201ENST00000425537 KCNIP4Q6PIL6 250 aa7.42□□□□□ -1.22
HMGB4-201ENST00000425537 ZNF600Q6ZNG1 722 aa7.42□□□□□ -1.22
HMGB4-201ENST00000425537 C9orf139Q6ZV77 190 aa7.42□□□□□ -1.22
HMGB4-201ENST00000425537 Q71RC1 249 aaPredicted RBP7.42□□□□□ -1.22
HMGB4-201ENST00000425537 TMEM219Q86XT9 240 aa7.42□□□□□ -1.22
HMGB4-201ENST00000425537 LYPD1Q8N2G4 141 aa7.42□□□□□ -1.22
HMGB4-201ENST00000425537 PIFOQ8TCI5 191 aa7.42□□□□□ -1.22
HMGB4-201ENST00000425537 HIST1H2BAQ96A08 127 aa7.42□□□□□ -1.22
HMGB4-201ENST00000425537 SHANK2-AS3Q9BTD1 123 aa7.42□□□□□ -1.22
HMGB4-201ENST00000425537 SLC25A39Q9BZJ4 359 aaPredicted RBP7.42□□□□□ -1.22
HMGB4-201ENST00000425537 PLXNB1O43157 2135 aa7.42□□□□□ -1.22
HMGB4-201ENST00000425537 NAV2Q8IVL1 2488 aa7.41□□□□□ -1.22
HMGB4-201ENST00000425537 TRAV5A0A0B4J249 113 aa7.41□□□□□ -1.22
HMGB4-201ENST00000425537 SCO2A0A1W2PP80 73 aa7.41□□□□□ -1.22
HMGB4-201ENST00000425537 COLCA2A8K830 154 aa7.41□□□□□ -1.22
HMGB4-201ENST00000425537 C1orf196B1AJZ1 125 aa7.41□□□□□ -1.22
HMGB4-201ENST00000425537 H3BRN7 92 aa7.41□□□□□ -1.22
HMGB4-201ENST00000425537 GNG4P50150 75 aa7.41□□□□□ -1.22
HMGB4-201ENST00000425537 KIAA0141Q14154 515 aaPredicted RBP7.41□□□□□ -1.22
HMGB4-201ENST00000425537 C15orf32Q32M92 178 aa7.41□□□□□ -1.22
HMGB4-201ENST00000425537 FBLN7Q53RD9 439 aa7.41□□□□□ -1.22
HMGB4-201ENST00000425537 ZNF491Q8N8L2 437 aa7.41□□□□□ -1.22
HMGB4-201ENST00000425537 ZNF502Q8TBZ5 544 aa7.41□□□□□ -1.22
HMGB4-201ENST00000425537 FXYD5Q96DB9 178 aa7.41□□□□□ -1.22
HMGB4-201ENST00000425537 ZNF503Q96F45 646 aa7.41□□□□□ -1.22
HMGB4-201ENST00000425537 USMG5Q96IX5 58 aa7.41□□□□□ -1.22
HMGB4-201ENST00000425537 GPR82Q96P67 336 aa7.41□□□□□ -1.22
HMGB4-201ENST00000425537 BIN3Q9NQY0 253 aa7.41□□□□□ -1.22
HMGB4-201ENST00000425537 RABAC1Q9UI14 185 aa7.41□□□□□ -1.22
HMGB4-201ENST00000425537 ABCA2Q9BZC7 2435 aa7.41□□□□□ -1.22
HMGB4-201ENST00000425537 CCDC168Q8NDH2 2452 aa7.4□□□□□ -1.22
HMGB4-201ENST00000425537 TEX15Q9BXT5 2789 aa7.4□□□□□ -1.22
HMGB4-201ENST00000425537 A0A0G2JLM5 398 aa7.4□□□□□ -1.22
HMGB4-201ENST00000425537 TMEM89A2RUT3 159 aa7.4□□□□□ -1.22
HMGB4-201ENST00000425537 K7EQM0 130 aa7.4□□□□□ -1.22
HMGB4-201ENST00000425537 PYYP10082 97 aa7.4□□□□□ -1.22
HMGB4-201ENST00000425537 GP9P14770 177 aa7.4□□□□□ -1.22
HMGB4-201ENST00000425537 RPL7P18124 248 aaKnown RBP7.4□□□□□ -1.22
HMGB4-201ENST00000425537 RAB5AP20339 215 aa7.4□□□□□ -1.22
HMGB4-201ENST00000425537 SRP14P37108 136 aaKnown RBP7.4□□□□□ -1.22
HMGB4-201ENST00000425537 UBE2G1P62253 170 aa7.4□□□□□ -1.22
HMGB4-201ENST00000425537 FLI1Q01543 452 aaPredicted RBP7.4□□□□□ -1.22
HMGB4-201ENST00000425537 LY6EQ16553 131 aa7.4□□□□□ -1.22
HMGB4-201ENST00000425537 LINC01551Q86U37 167 aa7.4□□□□□ -1.22
HMGB4-201ENST00000425537 FAM24BQ8N5W8 94 aa7.4□□□□□ -1.22
HMGB4-201ENST00000425537 C5orf17Q8NAS9 161 aa7.4□□□□□ -1.22
HMGB4-201ENST00000425537 CMTM2Q8TAZ6 248 aa7.4□□□□□ -1.22
HMGB4-201ENST00000425537 SMIM12Q96EX1 92 aa7.4□□□□□ -1.22
HMGB4-201ENST00000425537 IMMP2LQ96T52 175 aa7.4□□□□□ -1.22
HMGB4-201ENST00000425537 GSX1Q9H4S2 264 aaPredicted RBP7.4□□□□□ -1.22
HMGB4-201ENST00000425537 OTORQ9NRC9 128 aa7.4□□□□□ -1.22
HMGB4-201ENST00000425537 CR1P17927 2039 aa7.4□□□□□ -1.23
HMGB4-201ENST00000425537 MYO9AB2RTY4 2548 aa7.39□□□□□ -1.23
HMGB4-201ENST00000425537 OR2T8A6NH00 312 aa7.39□□□□□ -1.23
HMGB4-201ENST00000425537 GGTLC3B5MD39 225 aa7.39□□□□□ -1.23
HMGB4-201ENST00000425537 PEX7O00628 323 aa7.39□□□□□ -1.23
HMGB4-201ENST00000425537 AVPP01185 164 aa7.39□□□□□ -1.23
HMGB4-201ENST00000425537 FSHBP01225 129 aa7.39□□□□□ -1.23
HMGB4-201ENST00000425537 TRGV3P03979 118 aa7.39□□□□□ -1.23
HMGB4-201ENST00000425537 SLC25A5P05141 298 aaKnown RBP7.39□□□□□ -1.23
HMGB4-201ENST00000425537 CTSGP08311 255 aa7.39□□□□□ -1.23
HMGB4-201ENST00000425537 NPPCP23582 126 aa7.39□□□□□ -1.23
HMGB4-201ENST00000425537 CRYBB3P26998 211 aa7.39□□□□□ -1.23
HMGB4-201ENST00000425537 RPL35P42766 123 aaKnown RBP7.39□□□□□ -1.23
HMGB4-201ENST00000425537 MEOX2P50222 304 aa7.39□□□□□ -1.23
HMGB4-201ENST00000425537 SCGB2A2Q13296 93 aa7.39□□□□□ -1.23
HMGB4-201ENST00000425537 PDE6HQ13956 83 aa7.39□□□□□ -1.23
HMGB4-201ENST00000425537 DEFB112Q30KQ8 113 aa7.39□□□□□ -1.23
HMGB4-201ENST00000425537 C19orf54Q5BKX5 351 aa7.39□□□□□ -1.23
HMGB4-201ENST00000425537 MORN5Q5VZ52 161 aa7.39□□□□□ -1.23
HMGB4-201ENST00000425537 ZNF329Q86UD4 541 aa7.39□□□□□ -1.23
HMGB4-201ENST00000425537 ARL6IP6Q8N6S5 226 aa7.39□□□□□ -1.23
HMGB4-201ENST00000425537 ISOC2Q96AB3 205 aa7.39□□□□□ -1.23
HMGB4-201ENST00000425537 CHRDL1Q9BU40 450 aa7.39□□□□□ -1.23
HMGB4-201ENST00000425537 CDC42EP3Q9UKI2 254 aa7.39□□□□□ -1.23
HMGB4-201ENST00000425537 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.39□□□□□ -1.23
HMGB4-201ENST00000425537 AKAP9Q99996 3911 aa7.38□□□□□ -1.23
HMGB4-201ENST00000425537 TRBV24-1A0A075B6N3 115 aa7.38□□□□□ -1.23
HMGB4-201ENST00000425537 TRAV9-1A0A075B6T8 112 aa7.38□□□□□ -1.23
HMGB4-201ENST00000425537 SERTM2A0A1B0GWG4 89 aa7.38□□□□□ -1.23
HMGB4-201ENST00000425537 PGPA6NDG6 321 aa7.38□□□□□ -1.23
HMGB4-201ENST00000425537 FBLL1A6NHQ2 334 aaKnown RBP7.38□□□□□ -1.23
HMGB4-201ENST00000425537 ZNF98A6NK75 572 aa7.38□□□□□ -1.23
HMGB4-201ENST00000425537 G3V318 75 aa7.38□□□□□ -1.23
HMGB4-201ENST00000425537 AMY1AP04745 511 aa7.38□□□□□ -1.23
HMGB4-201ENST00000425537 GPR183P32249 361 aa7.38□□□□□ -1.23
HMGB4-201ENST00000425537 IER3P46695 156 aa7.38□□□□□ -1.23
HMGB4-201ENST00000425537 GALR1P47211 349 aa7.38□□□□□ -1.23
HMGB4-201ENST00000425537 RANP62826 216 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms