RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 SLC25A39Q9BZJ4 359 aaPredicted RBP9.25□□□□□ -0.93
PTCH1-205ENST00000418258 PLXNA4Q9HCM2 1894 aa9.25□□□□□ -0.93
PTCH1-205ENST00000418258 IGLV3-32A0A0A0MS00 114 aa9.25□□□□□ -0.93
PTCH1-205ENST00000418258 M0R1W7 72 aa9.25□□□□□ -0.93
PTCH1-205ENST00000418258 PAX4O43316 350 aa9.25□□□□□ -0.93
PTCH1-205ENST00000418258 Q0VFX4 171 aa9.25□□□□□ -0.93
PTCH1-205ENST00000418258 EXOC3-AS1Q8N2X6 119 aa9.25□□□□□ -0.93
PTCH1-205ENST00000418258 INSP01308 110 aa9.24□□□□□ -0.93
PTCH1-205ENST00000418258 GZMBP10144 247 aa9.24□□□□□ -0.93
PTCH1-205ENST00000418258 SELLP14151 372 aa9.24□□□□□ -0.93
PTCH1-205ENST00000418258 IGFBP3P17936 291 aaPredicted RBP9.24□□□□□ -0.93
PTCH1-205ENST00000418258 CCL20P78556 96 aa9.24□□□□□ -0.93
PTCH1-205ENST00000418258 USMG5Q96IX5 58 aa9.24□□□□□ -0.93
PTCH1-205ENST00000418258 SPCS1Q9Y6A9 102 aa9.24□□□□□ -0.93
PTCH1-205ENST00000418258 INS-IGF2F8WCM5 200 aa9.24□□□□□ -0.93
PTCH1-205ENST00000418258 SLC25A16P16260 332 aa9.24□□□□□ -0.93
PTCH1-205ENST00000418258 LAGE3Q14657 143 aa9.24□□□□□ -0.93
PTCH1-205ENST00000418258 Q5PR19 223 aa9.24□□□□□ -0.93
PTCH1-205ENST00000418258 MESP1Q9BRJ9 268 aa9.24□□□□□ -0.93
PTCH1-205ENST00000418258 CEACAM8P31997 349 aaPredicted RBP9.24□□□□□ -0.93
PTCH1-205ENST00000418258 ERCC8Q13216 396 aa9.24□□□□□ -0.93
PTCH1-205ENST00000418258 BUB1B-PAK6H3BSN5 160 aa9.24□□□□□ -0.93
PTCH1-205ENST00000418258 NAPSAO96009 420 aa9.24□□□□□ -0.93
PTCH1-205ENST00000418258 TMEM249Q2WGJ8 235 aa9.24□□□□□ -0.93
PTCH1-205ENST00000418258 ZNF474Q6S9Z5 364 aaPredicted RBP9.24□□□□□ -0.93
PTCH1-205ENST00000418258 RPUSD1Q9UJJ7 312 aaKnown RBP9.24□□□□□ -0.93
PTCH1-205ENST00000418258 HOXA3O43365 443 aaPredicted RBP9.24□□□□□ -0.93
PTCH1-205ENST00000418258 DEFB130BP0DP73 79 aa9.23□□□□□ -0.93
PTCH1-205ENST00000418258 DEFB130AP0DP74 79 aa9.23□□□□□ -0.93
PTCH1-205ENST00000418258 SCRT1Q9BWW7 348 aa9.23□□□□□ -0.93
PTCH1-205ENST00000418258 SLC25A48Q6ZT89 311 aaKnown RBP9.23□□□□□ -0.93
PTCH1-205ENST00000418258 TRAV9-1A0A075B6T8 112 aa9.23□□□□□ -0.93
PTCH1-205ENST00000418258 PPBPP02775 128 aa9.23□□□□□ -0.93
PTCH1-205ENST00000418258 SRP19P09132 144 aaKnown RBP9.23□□□□□ -0.93
PTCH1-205ENST00000418258 PSG1P11464 419 aa9.23□□□□□ -0.93
PTCH1-205ENST00000418258 M0R2P5 195 aa9.23□□□□□ -0.93
PTCH1-205ENST00000418258 SAA4P35542 130 aa9.23□□□□□ -0.93
PTCH1-205ENST00000418258 ZNF876PQ49A33 203 aa9.23□□□□□ -0.93
PTCH1-205ENST00000418258 FAM90A9PA6NNJ1 464 aa9.23□□□□□ -0.93
PTCH1-205ENST00000418258 GATA4P43694 442 aa9.23□□□□□ -0.93
PTCH1-205ENST00000418258 HEPN1Q6WQI6 88 aa9.23□□□□□ -0.93
PTCH1-205ENST00000418258 PAQR4Q8N4S7 273 aaPredicted RBP9.23□□□□□ -0.93
PTCH1-205ENST00000418258 GTF3AQ92664 365 aaKnown RBP9.23□□□□□ -0.93
PTCH1-205ENST00000418258 ADMP35318 185 aa9.23□□□□□ -0.93
PTCH1-205ENST00000418258 MTURNQ8N3F0 131 aa9.23□□□□□ -0.93
PTCH1-205ENST00000418258 FAM223BA6NKX1 122 aa9.22□□□□□ -0.93
PTCH1-205ENST00000418258 FAM223AQ8IWN6 122 aa9.22□□□□□ -0.93
PTCH1-205ENST00000418258 MED13Q9UHV7 2174 aa9.22□□□□□ -0.93
PTCH1-205ENST00000418258 SIP14410 1827 aa9.22□□□□□ -0.93
PTCH1-205ENST00000418258 A0A1B0GV90 55 aa9.22□□□□□ -0.93
PTCH1-205ENST00000418258 IGKCP01834 107 aa9.22□□□□□ -0.93
PTCH1-205ENST00000418258 SRRM5B3KS81 715 aa9.22□□□□□ -0.93
PTCH1-205ENST00000418258 F8WEM9 126 aa9.22□□□□□ -0.93
PTCH1-205ENST00000418258 CGB3P0DN86 165 aa9.22□□□□□ -0.93
PTCH1-205ENST00000418258 LAMTOR3Q9UHA4 124 aa9.22□□□□□ -0.93
PTCH1-205ENST00000418258 C6orf226Q5I0X4 101 aa9.22□□□□□ -0.93
PTCH1-205ENST00000418258 TRAV5A0A0B4J249 113 aa9.22□□□□□ -0.93
PTCH1-205ENST00000418258 TNFSF13O75888 250 aa9.22□□□□□ -0.93
PTCH1-205ENST00000418258 RPL23P62829 140 aaKnown RBP9.22□□□□□ -0.93
PTCH1-205ENST00000418258 C5orf64Q2M2E5 130 aa9.22□□□□□ -0.93
PTCH1-205ENST00000418258 C10orf55Q5SWW7 151 aa9.22□□□□□ -0.93
PTCH1-205ENST00000418258 CCL1P22362 96 aa9.21□□□□□ -0.93
PTCH1-205ENST00000418258 MBD3L1Q8WWY6 194 aa9.21□□□□□ -0.93
PTCH1-205ENST00000418258 NHP2Q9NX24 153 aaKnown RBP9.21□□□□□ -0.93
PTCH1-205ENST00000418258 IGKV1-9A0A0C4DH69 117 aa9.21□□□□□ -0.93
PTCH1-205ENST00000418258 EREGO14944 169 aa9.21□□□□□ -0.93
PTCH1-205ENST00000418258 TOMM40O96008 361 aa9.21□□□□□ -0.93
PTCH1-205ENST00000418258 KLF17Q5JT82 389 aaPredicted RBP9.21□□□□□ -0.93
PTCH1-205ENST00000418258 FAM110DQ8TAY7 271 aaPredicted RBP9.21□□□□□ -0.93
PTCH1-205ENST00000418258 CD300EQ496F6 205 aaPredicted RBP9.21□□□□□ -0.93
PTCH1-205ENST00000418258 FLVCR1-AS1Q8TAF5 88 aa9.21□□□□□ -0.93
PTCH1-205ENST00000418258 COL8A2P25067 703 aa9.21□□□□□ -0.94
PTCH1-205ENST00000418258 OOSP1A8MZH6 123 aa9.21□□□□□ -0.94
PTCH1-205ENST00000418258 ZNF138P52744 262 aa9.21□□□□□ -0.94
PTCH1-205ENST00000418258 MSRB2Q9Y3D2 182 aa9.21□□□□□ -0.94
PTCH1-205ENST00000418258 ARHGAP21Q5T5U3 1957 aa9.21□□□□□ -0.94
PTCH1-205ENST00000418258 LINC00587B1AMM8 73 aa9.21□□□□□ -0.94
PTCH1-205ENST00000418258 SYNJ2BPP57105 145 aa9.21□□□□□ -0.94
PTCH1-205ENST00000418258 SS18Q15532 418 aa9.21□□□□□ -0.94
PTCH1-205ENST00000418258 TEX43Q6ZNM6 134 aa9.21□□□□□ -0.94
PTCH1-205ENST00000418258 LTBP1Q14766 1721 aa9.2□□□□□ -0.94
PTCH1-205ENST00000418258 A0A1W2PRE2 83 aa9.2□□□□□ -0.94
PTCH1-205ENST00000418258 C1QTNF9P0C862 333 aa9.2□□□□□ -0.94
PTCH1-205ENST00000418258 FOXG1P55316 489 aaPredicted RBP9.2□□□□□ -0.94
PTCH1-205ENST00000418258 NEUROG3Q9Y4Z2 214 aa9.2□□□□□ -0.94
PTCH1-205ENST00000418258 F5H768 121 aa9.2□□□□□ -0.94
PTCH1-205ENST00000418258 FOXL1Q12952 345 aa9.2□□□□□ -0.94
PTCH1-205ENST00000418258 LINC00477Q96M19 166 aa9.2□□□□□ -0.94
PTCH1-205ENST00000418258 MED13LQ71F56 2210 aa9.2□□□□□ -0.94
PTCH1-205ENST00000418258 PSPNO60542 156 aa9.2□□□□□ -0.94
PTCH1-205ENST00000418258 NIT1Q86X76 327 aa9.2□□□□□ -0.94
PTCH1-205ENST00000418258 PLXNB3Q9ULL4 1909 aa9.2□□□□□ -0.94
PTCH1-205ENST00000418258 MSMBP08118 114 aa9.2□□□□□ -0.94
PTCH1-205ENST00000418258 RUSC1-AS1Q66K80 236 aa9.2□□□□□ -0.94
PTCH1-205ENST00000418258 SERF1AO75920 110 aa9.2□□□□□ -0.94
PTCH1-205ENST00000418258 LCN12Q6JVE5 192 aa9.2□□□□□ -0.94
PTCH1-205ENST00000418258 C1orf159Q96HA4 380 aa9.2□□□□□ -0.94
PTCH1-205ENST00000418258 ZNF319Q9P2F9 582 aa9.2□□□□□ -0.94
PTCH1-205ENST00000418258 E9PQ18 207 aa9.19□□□□□ -0.94
PTCH1-205ENST00000418258 CD177Q8N6Q3 437 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms