RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 TRAV8-3A0A0A6YYJ7 113 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 TRGV5A0A0B4J1U4 118 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 IGKV1D-43A0A0B4J1Z2 117 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 TMEM269A0A1B0GVZ9 245 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 OR4C45A6NMZ5 311 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 H3BSH0 61 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 MFNGO00587 321 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 PFDN1O60925 122 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 CD2P06729 351 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 RPS11P62280 158 aaKnown RBP eCLIP1.77□□□□□ -2.13
MCF2-204ENST00000414978 H3F3AP84243 136 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 C15orf32Q32M92 178 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 NCMAPQ5T1S8 102 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 BCL2L15Q5TBC7 163 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 AAED1Q7RTV5 226 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 SNX29P2Q8IUI4 249 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 MUC15Q8N387 334 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 GDPD1Q8N9F7 314 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 RPS4Y2Q8TD47 263 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 SLAMF6Q96DU3 332 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 AMELYQ99218 206 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 KRTAP4-12Q9BQ66 201 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 MIXL1Q9H2W2 232 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.77□□□□□ -2.13
MCF2-204ENST00000414978 R4GMQ9 66 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 ALPK2Q86TB3 2170 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 CSMD2Q7Z408 3487 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 MED12Q93074 2177 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 A0A0G2JMP0 313 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 A0A0X1KG70 313 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 A6NED7 52 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 OR11H12B2RN74 326 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 ISLRO14498 428 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 SERF1AO75920 110 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 CCL1P22362 96 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 UBA52P62987 128 aaKnown RBP1.77□□□□□ -2.13
MCF2-204ENST00000414978 HIST3H3Q16695 136 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 C1orf195Q5TG92 126 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 TRIQKQ629K1 86 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 OR10K2Q6IF99 312 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 LRRC28Q86X40 367 aaPredicted RBP1.77□□□□□ -2.13
MCF2-204ENST00000414978 ZIC4Q8N9L1 334 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 OR11H1Q8NG94 326 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 OR11H2Q8NH07 326 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 OR4A5Q8NH83 315 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 LINC01560Q8TB33 94 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 TMEM106AQ96A25 262 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 KRTAP9-3Q9BYQ3 159 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 ABCG5Q9H222 651 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 C21orf62Q9NYP8 219 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 ABRACLQ9P1F3 81 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 OR52A1Q9UKL2 312 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 MCTS1Q9ULC4 181 aaKnown RBP1.77□□□□□ -2.13
MCF2-204ENST00000414978 HHLA2Q9UM44 414 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 V9GYH0 126 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 PKD1L1Q8TDX9 2849 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 CUBNO60494 3623 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 IGHV3OR16-9A0A0B4J2B5 98 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 IFITM5A6NNB3 132 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 AIPO00170 330 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 RER1O15258 196 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 MRPL33O75394 65 aaKnown RBP1.77□□□□□ -2.13
MCF2-204ENST00000414978 MAS1P04201 325 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 AKR1C4P17516 323 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 CNTFRP26992 372 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 EVX1P49640 407 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 MRGPRG-AS1Q2M3A8 158 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 C10orf128Q5T292 105 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 TMEM78Q5T7P6 136 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 FAM222AQ5U5X8 452 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 TMEM244Q5VVB8 128 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 IL34Q6ZMJ4 242 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 C20orf196Q8IYI0 205 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 ZNF283Q8N7M2 679 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 ABHD3Q8WU67 409 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 S100PBPQ96BU1 408 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 ZNF799Q96GE5 643 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 SND1-IT1Q9HBX3 110 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 DIABLOQ9NR28 239 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 FAIMQ9NVQ4 179 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 LHFPL6Q9Y693 200 aa1.77□□□□□ -2.13
MCF2-204ENST00000414978 CNTRLQ7Z7A1 2325 aa1.76□□□□□ -2.13
MCF2-204ENST00000414978 LOC107986453A0A1B0GWG9 222 aa1.76□□□□□ -2.13
MCF2-204ENST00000414978 KRBOX1C9JBD0 128 aa1.76□□□□□ -2.13
MCF2-204ENST00000414978 TCAPO15273 167 aa1.76□□□□□ -2.13
MCF2-204ENST00000414978 CA2P00918 260 aa1.76□□□□□ -2.13
MCF2-204ENST00000414978 LHBP01229 141 aa1.76□□□□□ -2.13
MCF2-204ENST00000414978 APOC1P02654 83 aa1.76□□□□□ -2.13
MCF2-204ENST00000414978 ISG15P05161 165 aa1.76□□□□□ -2.13
MCF2-204ENST00000414978 SOD3P08294 240 aa1.76□□□□□ -2.13
MCF2-204ENST00000414978 IL7P13232 177 aa1.76□□□□□ -2.13
MCF2-204ENST00000414978 ELK1P19419 428 aa1.76□□□□□ -2.13
MCF2-204ENST00000414978 SYNJ2BPP57105 145 aa1.76□□□□□ -2.13
MCF2-204ENST00000414978 GUK1Q16774 197 aa1.76□□□□□ -2.13
MCF2-204ENST00000414978 Q5XG85 94 aa1.76□□□□□ -2.13
MCF2-204ENST00000414978 GLT8D1Q68CQ7 371 aa1.76□□□□□ -2.13
MCF2-204ENST00000414978 TCF24Q7RTU0 167 aa1.76□□□□□ -2.13
MCF2-204ENST00000414978 ZDHHC22Q8N966 263 aa1.76□□□□□ -2.13
MCF2-204ENST00000414978 OR51A4Q8NGJ6 313 aa1.76□□□□□ -2.13
MCF2-204ENST00000414978 OR4P4Q8NGL7 312 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms