RNA–Protein interactions for RNA: ENST00000412568.6

PTPRF-204, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 4,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-204ENST00000412568 A6NNC1 897 aa9.1□□□□□ -0.95
PTPRF-204ENST00000412568 CA1P00915 261 aaPredicted RBP9.1□□□□□ -0.95
PTPRF-204ENST00000412568 LOXP28300 417 aaPredicted RBP9.1□□□□□ -0.95
PTPRF-204ENST00000412568 C15orf65H3BRN8 121 aa9.09□□□□□ -0.95
PTPRF-204ENST00000412568 BUB1B-PAK6H3BSN5 160 aa9.09□□□□□ -0.95
PTPRF-204ENST00000412568 CD33P20138 364 aa9.09□□□□□ -0.95
PTPRF-204ENST00000412568 TMEM78Q5T7P6 136 aa9.09□□□□□ -0.95
PTPRF-204ENST00000412568 ZFP30Q9Y2G7 519 aa9.09□□□□□ -0.95
PTPRF-204ENST00000412568 F11RQ9Y624 299 aaKnown RBP9.09□□□□□ -0.95
PTPRF-204ENST00000412568 HIVEP2P31629 2446 aa9.09□□□□□ -0.95
PTPRF-204ENST00000412568 RNASEH2CQ8TDP1 164 aaKnown RBP9.09□□□□□ -0.95
PTPRF-204ENST00000412568 VCANP13611 3396 aa9.09□□□□□ -0.95
PTPRF-204ENST00000412568 PSMB2P49721 201 aa9.09□□□□□ -0.95
PTPRF-204ENST00000412568 TM4SF20Q53R12 229 aa9.09□□□□□ -0.95
PTPRF-204ENST00000412568 FAM90A2PQ658T7 463 aa9.09□□□□□ -0.95
PTPRF-204ENST00000412568 TMEM170AQ8WVE7 144 aa9.09□□□□□ -0.95
PTPRF-204ENST00000412568 TPSG1Q9NRR2 321 aa9.09□□□□□ -0.95
PTPRF-204ENST00000412568 HLA-DRB1P01911 266 aa9.09□□□□□ -0.96
PTPRF-204ENST00000412568 RHOGP84095 191 aa9.09□□□□□ -0.96
PTPRF-204ENST00000412568 KRTAP27-1Q3LI81 207 aa9.09□□□□□ -0.96
PTPRF-204ENST00000412568 SPANXN1Q5VSR9 72 aa9.09□□□□□ -0.96
PTPRF-204ENST00000412568 Q8NA96 180 aa9.09□□□□□ -0.96
PTPRF-204ENST00000412568 DYNLRB2Q8TF09 96 aa9.09□□□□□ -0.96
PTPRF-204ENST00000412568 STAG3L2P0CL84 134 aa9.08□□□□□ -0.96
PTPRF-204ENST00000412568 STAG3L3P0CL85 134 aa9.08□□□□□ -0.96
PTPRF-204ENST00000412568 GATA4P43694 442 aa9.08□□□□□ -0.96
PTPRF-204ENST00000412568 RELQ04864 619 aaPredicted RBP9.08□□□□□ -0.96
PTPRF-204ENST00000412568 PET117Q6UWS5 81 aa9.08□□□□□ -0.96
PTPRF-204ENST00000412568 TEX45Q8NA69 505 aa9.08□□□□□ -0.96
PTPRF-204ENST00000412568 MIEN1Q9BRT3 115 aa9.08□□□□□ -0.96
PTPRF-204ENST00000412568 IL36BQ9NZH7 164 aa9.08□□□□□ -0.96
PTPRF-204ENST00000412568 PLA2G2EQ9NZK7 142 aa9.08□□□□□ -0.96
PTPRF-204ENST00000412568 TMEM189A5PLL7 270 aa9.08□□□□□ -0.96
PTPRF-204ENST00000412568 H3BVH4 76 aa9.08□□□□□ -0.96
PTPRF-204ENST00000412568 MGPP08493 103 aa9.08□□□□□ -0.96
PTPRF-204ENST00000412568 FABP2P12104 132 aa9.08□□□□□ -0.96
PTPRF-204ENST00000412568 CX3CL1P78423 397 aa9.08□□□□□ -0.96
PTPRF-204ENST00000412568 ZNF841Q6ZN19 808 aa9.08□□□□□ -0.96
PTPRF-204ENST00000412568 HAPLN4Q86UW8 402 aa9.08□□□□□ -0.96
PTPRF-204ENST00000412568 C1QL4Q86Z23 238 aa9.08□□□□□ -0.96
PTPRF-204ENST00000412568 LAMTOR2Q9Y2Q5 125 aa9.08□□□□□ -0.96
PTPRF-204ENST00000412568 SIGLEC9Q9Y336 463 aa9.08□□□□□ -0.96
PTPRF-204ENST00000412568 ARHGAP32A7KAX9 2087 aa9.08□□□□□ -0.96
PTPRF-204ENST00000412568 TRAV30A0A087WSZ9 112 aa9.08□□□□□ -0.96
PTPRF-204ENST00000412568 FAM90A9PA6NNJ1 464 aa9.08□□□□□ -0.96
PTPRF-204ENST00000412568 SRRM4A7MD48 611 aaKnown RBP9.08□□□□□ -0.96
PTPRF-204ENST00000412568 TPTE2P1Q5T6R2 138 aa9.08□□□□□ -0.96
PTPRF-204ENST00000412568 CTSZQ9UBR2 303 aa9.08□□□□□ -0.96
PTPRF-204ENST00000412568 SORL1Q92673 2214 aa9.07□□□□□ -0.96
PTPRF-204ENST00000412568 IGHV3OR16-12A0A075B7B8 117 aa9.07□□□□□ -0.96
PTPRF-204ENST00000412568 PEX7O00628 323 aa9.07□□□□□ -0.96
PTPRF-204ENST00000412568 PSG1P11464 419 aa9.07□□□□□ -0.96
PTPRF-204ENST00000412568 SRD5A1P18405 259 aa9.07□□□□□ -0.96
PTPRF-204ENST00000412568 BMI1P35226 326 aa9.07□□□□□ -0.96
PTPRF-204ENST00000412568 TWIST1Q15672 202 aa9.07□□□□□ -0.96
PTPRF-204ENST00000412568 EEF1AKMT3Q96AZ1 226 aa9.07□□□□□ -0.96
PTPRF-204ENST00000412568 ASCL2Q99929 193 aa9.07□□□□□ -0.96
PTPRF-204ENST00000412568 NRN1Q9NPD7 142 aa9.07□□□□□ -0.96
PTPRF-204ENST00000412568 TCRBV4S1A1TA0A5B7 111 aa9.07□□□□□ -0.96
PTPRF-204ENST00000412568 SHISA9B4DS77 424 aa9.07□□□□□ -0.96
PTPRF-204ENST00000412568 TMEM155Q4W5P6 130 aa9.07□□□□□ -0.96
PTPRF-204ENST00000412568 ZNF329Q86UD4 541 aa9.07□□□□□ -0.96
PTPRF-204ENST00000412568 AGMATQ9BSE5 352 aa9.07□□□□□ -0.96
PTPRF-204ENST00000412568 RUSC1-AS1Q66K80 236 aa9.07□□□□□ -0.96
PTPRF-204ENST00000412568 CRIP3Q6Q6R5 217 aa9.07□□□□□ -0.96
PTPRF-204ENST00000412568 TMEM70Q9BUB7 260 aa9.07□□□□□ -0.96
PTPRF-204ENST00000412568 Q9H3A6 140 aa9.07□□□□□ -0.96
PTPRF-204ENST00000412568 PRDM13Q9H4Q3 707 aa9.07□□□□□ -0.96
PTPRF-204ENST00000412568 TRBV24-1A0A075B6N3 115 aa9.06□□□□□ -0.96
PTPRF-204ENST00000412568 LOC107984156A0A0G2JMH3 177 aa9.06□□□□□ -0.96
PTPRF-204ENST00000412568 CKS2P33552 79 aa9.06□□□□□ -0.96
PTPRF-204ENST00000412568 DLX6P56179 175 aa9.06□□□□□ -0.96
PTPRF-204ENST00000412568 ZNF726P1Q15940 193 aa9.06□□□□□ -0.96
PTPRF-204ENST00000412568 ARL17AQ8IVW1 177 aa9.06□□□□□ -0.96
PTPRF-204ENST00000412568 TMEM167AQ8TBQ9 72 aa9.06□□□□□ -0.96
PTPRF-204ENST00000412568 RNF125Q96EQ8 232 aa9.06□□□□□ -0.96
PTPRF-204ENST00000412568 TNRC6AQ8NDV7 1962 aaKnown RBP9.06□□□□□ -0.96
PTPRF-204ENST00000412568 A0A1W2PPI3 338 aa9.06□□□□□ -0.96
PTPRF-204ENST00000412568 A0A1W2PRX2 142 aa9.06□□□□□ -0.96
PTPRF-204ENST00000412568 H3BUX3 64 aa9.06□□□□□ -0.96
PTPRF-204ENST00000412568 SAA4P35542 130 aa9.06□□□□□ -0.96
PTPRF-204ENST00000412568 LINC01551Q86U37 167 aa9.06□□□□□ -0.96
PTPRF-204ENST00000412568 PMCHL2Q9BQD1 86 aa9.06□□□□□ -0.96
PTPRF-204ENST00000412568 ZNF257Q9Y2Q1 563 aa9.06□□□□□ -0.96
PTPRF-204ENST00000412568 BTF3P20290 206 aaKnown RBP9.06□□□□□ -0.96
PTPRF-204ENST00000412568 ADMP35318 185 aa9.06□□□□□ -0.96
PTPRF-204ENST00000412568 IGFL4Q6B9Z1 124 aa9.06□□□□□ -0.96
PTPRF-204ENST00000412568 EXOC3-AS1Q8N2X6 119 aa9.06□□□□□ -0.96
PTPRF-204ENST00000412568 GLMPQ8WWB7 406 aa9.06□□□□□ -0.96
PTPRF-204ENST00000412568 SCRT1Q9BWW7 348 aa9.06□□□□□ -0.96
PTPRF-204ENST00000412568 RPL15P61313 204 aaKnown RBP9.05□□□□□ -0.96
PTPRF-204ENST00000412568 HIST1H1AQ02539 215 aaPredicted RBP9.05□□□□□ -0.96
PTPRF-204ENST00000412568 TEX38Q6PEX7 206 aa9.05□□□□□ -0.96
PTPRF-204ENST00000412568 ZNF502Q8TBZ5 544 aa9.05□□□□□ -0.96
PTPRF-204ENST00000412568 MYOZ3Q8TDC0 251 aa9.05□□□□□ -0.96
PTPRF-204ENST00000412568 WFDC12Q8WWY7 111 aa9.05□□□□□ -0.96
PTPRF-204ENST00000412568 LINC00479Q96M42 142 aa9.05□□□□□ -0.96
PTPRF-204ENST00000412568 CDC42EP3Q9UKI2 254 aa9.05□□□□□ -0.96
PTPRF-204ENST00000412568 PMS2P5A8MQ11 134 aa9.05□□□□□ -0.96
PTPRF-204ENST00000412568 RNASE2P10153 161 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms