RNA–Protein interactions for RNA: ENST00000412218.1

LINC01643-201, Transcript of long intergenic non-protein coding RNA 1643, humanhuman

TSL 5 BASIC

Gene LINC01643, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01643-201ENST00000412218 USMG5Q96IX5 58 aa7.77□□□□□ -1.17
LINC01643-201ENST00000412218 WWC2-AS2Q96NR7 200 aa7.77□□□□□ -1.17
LINC01643-201ENST00000412218 RARRES2Q99969 163 aa7.77□□□□□ -1.17
LINC01643-201ENST00000412218 ELOVL1Q9BW60 279 aa7.77□□□□□ -1.17
LINC01643-201ENST00000412218 SMCO4Q9NRQ5 59 aa7.77□□□□□ -1.17
LINC01643-201ENST00000412218 SMAD5-AS1Q9Y6J3 95 aa7.77□□□□□ -1.17
LINC01643-201ENST00000412218 U3KQK5 164 aa7.77□□□□□ -1.17
LINC01643-201ENST00000412218 A0A1W2PPV4 95 aa7.76□□□□□ -1.17
LINC01643-201ENST00000412218 ZFP92A6NM28 416 aa7.76□□□□□ -1.17
LINC01643-201ENST00000412218 M0R036 132 aa7.76□□□□□ -1.17
LINC01643-201ENST00000412218 ACTL6BO94805 426 aa7.76□□□□□ -1.17
LINC01643-201ENST00000412218 IGLV1-51P01701 117 aa7.76□□□□□ -1.17
LINC01643-201ENST00000412218 TRBV12-3P01733 135 aa7.76□□□□□ -1.17
LINC01643-201ENST00000412218 GPX4P36969 197 aaPredicted RBP7.76□□□□□ -1.17
LINC01643-201ENST00000412218 RPL29P47914 159 aaKnown RBP7.76□□□□□ -1.17
LINC01643-201ENST00000412218 PSMB3P49720 205 aa7.76□□□□□ -1.17
LINC01643-201ENST00000412218 FGF8P55075 233 aaPredicted RBP7.76□□□□□ -1.17
LINC01643-201ENST00000412218 KLF5Q13887 457 aaPredicted RBP7.76□□□□□ -1.17
LINC01643-201ENST00000412218 SSX7Q7RTT5 188 aa7.76□□□□□ -1.17
LINC01643-201ENST00000412218 TMEM144Q7Z5S9 345 aa7.76□□□□□ -1.17
LINC01643-201ENST00000412218 RNASEH2CQ8TDP1 164 aaKnown RBP7.76□□□□□ -1.17
LINC01643-201ENST00000412218 CACNG8Q8WXS5 425 aa7.76□□□□□ -1.17
LINC01643-201ENST00000412218 RAB24Q969Q5 203 aa7.76□□□□□ -1.17
LINC01643-201ENST00000412218 SLC35E1Q96K37 410 aa7.76□□□□□ -1.17
LINC01643-201ENST00000412218 MGST2Q99735 147 aa7.76□□□□□ -1.17
LINC01643-201ENST00000412218 ASCL2Q99929 193 aa7.76□□□□□ -1.17
LINC01643-201ENST00000412218 NIPSNAP3BQ9BS92 247 aa7.76□□□□□ -1.17
LINC01643-201ENST00000412218 PEF1Q9UBV8 284 aaKnown RBP7.76□□□□□ -1.17
LINC01643-201ENST00000412218 PXMP4Q9Y6I8 212 aa7.76□□□□□ -1.17
LINC01643-201ENST00000412218 DNAH9Q9NYC9 4486 aa7.75□□□□□ -1.17
LINC01643-201ENST00000412218 TRBV9A0A0B4J1U6 114 aa7.75□□□□□ -1.17
LINC01643-201ENST00000412218 FAM223BA6NKX1 122 aa7.75□□□□□ -1.17
LINC01643-201ENST00000412218 TEX22C9J3V5 150 aa7.75□□□□□ -1.17
LINC01643-201ENST00000412218 MYOD1P15172 320 aa7.75□□□□□ -1.17
LINC01643-201ENST00000412218 RPL27AP46776 148 aaKnown RBP7.75□□□□□ -1.17
LINC01643-201ENST00000412218 SYNJ2BPP57105 145 aa7.75□□□□□ -1.17
LINC01643-201ENST00000412218 B2MP61769 119 aa7.75□□□□□ -1.17
LINC01643-201ENST00000412218 RHOGP84095 191 aa7.75□□□□□ -1.17
LINC01643-201ENST00000412218 PNRC1Q12796 327 aaPredicted RBP7.75□□□□□ -1.17
LINC01643-201ENST00000412218 FAM223AQ8IWN6 122 aa7.75□□□□□ -1.17
LINC01643-201ENST00000412218 TTC9CQ8N5M4 171 aa7.75□□□□□ -1.17
LINC01643-201ENST00000412218 CYB561D1Q8N8Q1 229 aa7.75□□□□□ -1.17
LINC01643-201ENST00000412218 OR9G4Q8NGQ1 327 aa7.75□□□□□ -1.17
LINC01643-201ENST00000412218 SRSF8Q9BRL6 282 aaKnown RBP7.75□□□□□ -1.17
LINC01643-201ENST00000412218 RPS10P5Q9NQ39 176 aa7.75□□□□□ -1.17
LINC01643-201ENST00000412218 COL7A1Q02388 2944 aa7.75□□□□□ -1.17
LINC01643-201ENST00000412218 TMEM250H0YL14 139 aa7.74□□□□□ -1.17
LINC01643-201ENST00000412218 CORTO00230 105 aa7.74□□□□□ -1.17
LINC01643-201ENST00000412218 NUPL2O15504 423 aaKnown RBP7.74□□□□□ -1.17
LINC01643-201ENST00000412218 MT-CO2P00403 227 aa7.74□□□□□ -1.17
LINC01643-201ENST00000412218 FRMD6-AS1P0C7T7 363 aa7.74□□□□□ -1.17
LINC01643-201ENST00000412218 RHOBP62745 196 aa7.74□□□□□ -1.17
LINC01643-201ENST00000412218 MEF2BQ02080 365 aaPredicted RBP7.74□□□□□ -1.17
LINC01643-201ENST00000412218 ETFRF1Q6IPR1 90 aa7.74□□□□□ -1.17
LINC01643-201ENST00000412218 TMEM88Q6PEY1 159 aa7.74□□□□□ -1.17
LINC01643-201ENST00000412218 SLC16A13Q7RTY0 426 aa7.74□□□□□ -1.17
LINC01643-201ENST00000412218 CBLN2Q8IUK8 224 aa7.74□□□□□ -1.17
LINC01643-201ENST00000412218 STPG3Q8N7X2 389 aa7.74□□□□□ -1.17
LINC01643-201ENST00000412218 C15orf54Q8N8G6 183 aa7.74□□□□□ -1.17
LINC01643-201ENST00000412218 ZNF114Q8NC26 417 aa7.74□□□□□ -1.17
LINC01643-201ENST00000412218 NECAP1Q8NC96 275 aa7.74□□□□□ -1.17
LINC01643-201ENST00000412218 TVP23CQ96ET8 276 aa7.74□□□□□ -1.17
LINC01643-201ENST00000412218 TXNDC17Q9BRA2 123 aa7.74□□□□□ -1.17
LINC01643-201ENST00000412218 TUBA4BQ9H853 241 aa7.74□□□□□ -1.17
LINC01643-201ENST00000412218 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.73□□□□□ -1.17
LINC01643-201ENST00000412218 C7orf77A4D0Y5 90 aa7.73□□□□□ -1.17
LINC01643-201ENST00000412218 NPIPB5A8MRT5 1133 aa7.73□□□□□ -1.17
LINC01643-201ENST00000412218 B4DEV8 164 aa7.73□□□□□ -1.17
LINC01643-201ENST00000412218 E7EUB6 86 aa7.73□□□□□ -1.17
LINC01643-201ENST00000412218 H3BQ15 152 aa7.73□□□□□ -1.17
LINC01643-201ENST00000412218 BMPR1BO00238 502 aa7.73□□□□□ -1.17
LINC01643-201ENST00000412218 YIF1AO95070 293 aa7.73□□□□□ -1.17
LINC01643-201ENST00000412218 CXorf1O96002 111 aa7.73□□□□□ -1.17
LINC01643-201ENST00000412218 CSN3P07498 182 aa7.73□□□□□ -1.17
LINC01643-201ENST00000412218 ATF4P18848 351 aaPredicted RBP7.73□□□□□ -1.17
LINC01643-201ENST00000412218 CEBPGP53567 150 aa7.73□□□□□ -1.17
LINC01643-201ENST00000412218 PRR20EP86478 221 aa7.73□□□□□ -1.17
LINC01643-201ENST00000412218 PRR20CP86479 221 aa7.73□□□□□ -1.17
LINC01643-201ENST00000412218 PRR20DP86480 221 aa7.73□□□□□ -1.17
LINC01643-201ENST00000412218 PRR20BP86481 221 aa7.73□□□□□ -1.17
LINC01643-201ENST00000412218 PRR20AP86496 221 aa7.73□□□□□ -1.17
LINC01643-201ENST00000412218 ATP5G2Q06055 141 aa7.73□□□□□ -1.17
LINC01643-201ENST00000412218 RPEL1Q2QD12 228 aa7.73□□□□□ -1.17
LINC01643-201ENST00000412218 MIC13Q5XKP0 118 aa7.73□□□□□ -1.17
LINC01643-201ENST00000412218 FAM90A2PQ658T7 463 aa7.73□□□□□ -1.17
LINC01643-201ENST00000412218 C19orf35Q6ZS72 473 aa7.73□□□□□ -1.17
LINC01643-201ENST00000412218 SBSPONQ8IVN8 264 aa7.73□□□□□ -1.17
LINC01643-201ENST00000412218 IQCF2Q8IXL9 164 aa7.73□□□□□ -1.17
LINC01643-201ENST00000412218 RNF2Q99496 336 aa7.73□□□□□ -1.17
LINC01643-201ENST00000412218 SIGLEC8Q9NYZ4 499 aa7.73□□□□□ -1.17
LINC01643-201ENST00000412218 SLC45A2Q9UMX9 530 aa7.73□□□□□ -1.17
LINC01643-201ENST00000412218 PUS1Q9Y606 427 aaKnown RBP eCLIP7.73□□□□□ -1.17
LINC01643-201ENST00000412218 ARL2-SNX15V9GYD0 113 aa7.73□□□□□ -1.17
LINC01643-201ENST00000412218 A0A087WWC5 75 aa7.72□□□□□ -1.17
LINC01643-201ENST00000412218 LOC105371267A0A1B0GV96 52 aa7.72□□□□□ -1.17
LINC01643-201ENST00000412218 F6UZH7 168 aa7.72□□□□□ -1.17
LINC01643-201ENST00000412218 OR2J3O76001 311 aa7.72□□□□□ -1.17
LINC01643-201ENST00000412218 CRYGCP07315 174 aa7.72□□□□□ -1.17
LINC01643-201ENST00000412218 STAG3L2P0CL84 134 aa7.72□□□□□ -1.17
LINC01643-201ENST00000412218 STAG3L3P0CL85 134 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 2937.8 ms