RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 C3orf56Q8N813 242 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 APCDD1LQ8NCL9 501 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 SCO2A0A1W2PP80 73 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 FAM231BA6NCW3 169 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 GATA1P15976 413 aaPredicted RBP3.77□□□□□ -1.81
PTPN13-202ENST00000411767 C1QL2Q7Z5L3 287 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 GFRA4Q9GZZ7 299 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 WFDC10AQ9H1F0 79 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 TRBV7-1A0A0A6YYK4 115 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 A0A1B0GTL3 188 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 PGLYRP1O75594 196 aaPredicted RBP3.77□□□□□ -1.81
PTPN13-202ENST00000411767 NXPH4O95158 308 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 HIST1H2BOP23527 126 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 HIST1H2BBP33778 126 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 HIST1H2BDP58876 126 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 HIST1H2BCP62807 126 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 HIST2H2BEQ16778 126 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.77□□□□□ -1.81
PTPN13-202ENST00000411767 HIST1H2BHQ93079 126 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 HIST1H2BNQ99877 126 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 HIST1H2BMQ99879 126 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 PDLIM7Q9NR12 457 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 IGHV3-72A0A0B4J1Y9 119 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 IGKV3D-7A0A0C4DH55 119 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 A4D1N5 150 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 NUP35Q8NFH5 326 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 FMN2Q9NZ56 1722 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 LOXHD1Q8IVV2 1947 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 SCN8AQ9UQD0 1980 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 SMIM26A0A096LP01 95 aa3.76□□□□□ -1.81
PTPN13-202ENST00000411767 SMIM9A6NGZ8 99 aa3.76□□□□□ -1.81
PTPN13-202ENST00000411767 C1QL1O75973 258 aa3.76□□□□□ -1.81
PTPN13-202ENST00000411767 GVQW1Q8N7I0 195 aa3.76□□□□□ -1.81
PTPN13-202ENST00000411767 NTN5Q8WTR8 489 aaPredicted RBP3.76□□□□□ -1.81
PTPN13-202ENST00000411767 DIRC1Q969H9 104 aa3.76□□□□□ -1.81
PTPN13-202ENST00000411767 ZNF142P52746 1687 aaPredicted RBP3.76□□□□□ -1.81
PTPN13-202ENST00000411767 A0A1B0GUS0 222 aa3.76□□□□□ -1.81
PTPN13-202ENST00000411767 PRSS46E5RG02 174 aa3.76□□□□□ -1.81
PTPN13-202ENST00000411767 ZNF474Q6S9Z5 364 aaPredicted RBP3.76□□□□□ -1.81
PTPN13-202ENST00000411767 TMEM219Q86XT9 240 aa3.76□□□□□ -1.81
PTPN13-202ENST00000411767 SPTY2D1-AS1A0A0U1RR47 76 aa3.76□□□□□ -1.81
PTPN13-202ENST00000411767 IGHMP01871 453 aa3.76□□□□□ -1.81
PTPN13-202ENST00000411767 CTRLP40313 264 aa3.76□□□□□ -1.81
PTPN13-202ENST00000411767 XCL1P47992 114 aa3.76□□□□□ -1.81
PTPN13-202ENST00000411767 PTCRAQ6ISU1 281 aaPredicted RBP3.76□□□□□ -1.81
PTPN13-202ENST00000411767 LYPD1Q8N2G4 141 aa3.76□□□□□ -1.81
PTPN13-202ENST00000411767 LTBP3Q9NS15 1303 aa3.76□□□□□ -1.81
PTPN13-202ENST00000411767 KLK5Q9Y337 293 aaPredicted RBP3.76□□□□□ -1.81
PTPN13-202ENST00000411767 K7EMI3 77 aa3.76□□□□□ -1.81
PTPN13-202ENST00000411767 K7ESM1 405 aa3.76□□□□□ -1.81
PTPN13-202ENST00000411767 IGKV1D-33P01593 117 aa3.76□□□□□ -1.81
PTPN13-202ENST00000411767 IGKV1-33P01594 117 aa3.76□□□□□ -1.81
PTPN13-202ENST00000411767 RNASE6Q93091 150 aaKnown RBP3.76□□□□□ -1.81
PTPN13-202ENST00000411767 USMG5Q96IX5 58 aa3.76□□□□□ -1.81
PTPN13-202ENST00000411767 IMMP1LQ96LU5 166 aa3.76□□□□□ -1.81
PTPN13-202ENST00000411767 CHD2O14647 1828 aaKnown RBP3.76□□□□□ -1.81
PTPN13-202ENST00000411767 GATA4P43694 442 aa3.76□□□□□ -1.81
PTPN13-202ENST00000411767 LINC01554Q52M75 96 aa3.76□□□□□ -1.81
PTPN13-202ENST00000411767 SP7Q8TDD2 431 aaPredicted RBP3.76□□□□□ -1.81
PTPN13-202ENST00000411767 CELA1Q9UNI1 258 aa3.76□□□□□ -1.81
PTPN13-202ENST00000411767 SNRPCP09234 159 aaKnown RBP3.76□□□□□ -1.81
PTPN13-202ENST00000411767 SCTP09683 121 aa3.76□□□□□ -1.81
PTPN13-202ENST00000411767 LINC00643Q86TS7 51 aa3.76□□□□□ -1.81
PTPN13-202ENST00000411767 IGKV6D-41A0A0C4DH26 115 aa3.76□□□□□ -1.81
PTPN13-202ENST00000411767 ARMS2P0C7Q2 107 aa3.76□□□□□ -1.81
PTPN13-202ENST00000411767 IGHV4-38-2P0DP08 117 aa3.76□□□□□ -1.81
PTPN13-202ENST00000411767 RPL35AP18077 110 aaKnown RBP3.76□□□□□ -1.81
PTPN13-202ENST00000411767 CBLN3Q6UW01 205 aa3.76□□□□□ -1.81
PTPN13-202ENST00000411767 MDFIQ99750 246 aa3.76□□□□□ -1.81
PTPN13-202ENST00000411767 RPP25Q9BUL9 199 aaKnown RBP3.76□□□□□ -1.81
PTPN13-202ENST00000411767 ESM1Q9NQ30 184 aa3.76□□□□□ -1.81
PTPN13-202ENST00000411767 IGHV3-73A0A0B4J1V6 119 aa3.75□□□□□ -1.81
PTPN13-202ENST00000411767 TCRBV5S1A1TA0A578 114 aa3.75□□□□□ -1.81
PTPN13-202ENST00000411767 FAM223BA6NKX1 122 aa3.75□□□□□ -1.81
PTPN13-202ENST00000411767 ANGP03950 147 aaKnown RBP3.75□□□□□ -1.81
PTPN13-202ENST00000411767 PIGYQ3MUY2 71 aa3.75□□□□□ -1.81
PTPN13-202ENST00000411767 FAM223AQ8IWN6 122 aa3.75□□□□□ -1.81
PTPN13-202ENST00000411767 FAM216BQ8N7L0 139 aa3.75□□□□□ -1.81
PTPN13-202ENST00000411767 FAM163AQ96GL9 167 aaPredicted RBP3.75□□□□□ -1.81
PTPN13-202ENST00000411767 CAMK2N2Q96S95 79 aa3.75□□□□□ -1.81
PTPN13-202ENST00000411767 MARF1Q9Y4F3 1742 aaKnown RBP3.75□□□□□ -1.81
PTPN13-202ENST00000411767 RGPD8O14715 1765 aaPredicted RBP3.75□□□□□ -1.81
PTPN13-202ENST00000411767 RAMP1O60894 148 aa3.75□□□□□ -1.81
PTPN13-202ENST00000411767 CFC1BP0CG36 223 aa3.75□□□□□ -1.81
PTPN13-202ENST00000411767 CFC1P0CG37 223 aa3.75□□□□□ -1.81
PTPN13-202ENST00000411767 IGHV1-8P0DP01 117 aa3.75□□□□□ -1.81
PTPN13-202ENST00000411767 CCL18P55774 89 aa3.75□□□□□ -1.81
PTPN13-202ENST00000411767 CCL8P80075 99 aa3.75□□□□□ -1.81
PTPN13-202ENST00000411767 ODF1Q14990 250 aa3.75□□□□□ -1.81
PTPN13-202ENST00000411767 DAZ4Q86SG3 579 aaKnown RBP3.75□□□□□ -1.81
PTPN13-202ENST00000411767 LRRC75A-AS1Q8N1F1 130 aa3.75□□□□□ -1.81
PTPN13-202ENST00000411767 DAZ1Q9NQZ3 744 aaKnown RBP3.75□□□□□ -1.81
PTPN13-202ENST00000411767 SPAG11AQ6PDA7 123 aa3.75□□□□□ -1.81
PTPN13-202ENST00000411767 C5orf56Q8N8D9 126 aa3.75□□□□□ -1.81
PTPN13-202ENST00000411767 ATP6V0E2Q8NHE4 81 aa3.75□□□□□ -1.81
PTPN13-202ENST00000411767 C8orf44Q96CB5 159 aa3.75□□□□□ -1.81
PTPN13-202ENST00000411767 TMEM61Q8N0U2 210 aa3.75□□□□□ -1.81
PTPN13-202ENST00000411767 NCR3O14931 201 aa3.75□□□□□ -1.81
PTPN13-202ENST00000411767 C16orf54Q6UWD8 224 aa3.75□□□□□ -1.81
PTPN13-202ENST00000411767 NRACQ8N912 160 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms