RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 OR52A1Q9UKL2 312 aa3□□□□□ -1.93
LSM5-206ENST00000409987 ZNF443Q9Y2A4 671 aaPredicted RBP3□□□□□ -1.93
LSM5-206ENST00000409987 ZNF462Q96JM2 2506 aa3□□□□□ -1.93
LSM5-206ENST00000409987 DOCK8Q8NF50 2099 aa3□□□□□ -1.93
LSM5-206ENST00000409987 KIAA1671Q9BY89 1806 aa3□□□□□ -1.93
LSM5-206ENST00000409987 SVILO95425 2214 aa3□□□□□ -1.93
LSM5-206ENST00000409987 TECTAO75443 2155 aa3□□□□□ -1.93
LSM5-206ENST00000409987 PTPRJQ12913 1337 aa2.99□□□□□ -1.93
LSM5-206ENST00000409987 IGLV3-12A0A075B6K2 115 aa2.99□□□□□ -1.93
LSM5-206ENST00000409987 TRAV38-1A0A0B4J264 116 aa2.99□□□□□ -1.93
LSM5-206ENST00000409987 M0QZK8 103 aa2.99□□□□□ -1.93
LSM5-206ENST00000409987 BANF1O75531 89 aa2.99□□□□□ -1.93
LSM5-206ENST00000409987 GZMHP20718 246 aa2.99□□□□□ -1.93
LSM5-206ENST00000409987 FXYD7P58549 80 aa2.99□□□□□ -1.93
LSM5-206ENST00000409987 RPS11P62280 158 aaKnown RBP eCLIP2.99□□□□□ -1.93
LSM5-206ENST00000409987 LTC4SQ16873 150 aa2.99□□□□□ -1.93
LSM5-206ENST00000409987 LGALSLQ3ZCW2 172 aaPredicted RBP2.99□□□□□ -1.93
LSM5-206ENST00000409987 AADACL3Q5VUY0 350 aa2.99□□□□□ -1.93
LSM5-206ENST00000409987 ZFAND6Q6FIF0 208 aa2.99□□□□□ -1.93
LSM5-206ENST00000409987 CNEP1R1Q8N9A8 125 aa2.99□□□□□ -1.93
LSM5-206ENST00000409987 ST6GALNAC3Q8NDV1 305 aa2.99□□□□□ -1.93
LSM5-206ENST00000409987 MUC7Q8TAX7 377 aa2.99□□□□□ -1.93
LSM5-206ENST00000409987 MBD3L1Q8WWY6 194 aa2.99□□□□□ -1.93
LSM5-206ENST00000409987 DERL1Q9BUN8 251 aa2.99□□□□□ -1.93
LSM5-206ENST00000409987 MED11Q9P086 117 aa2.99□□□□□ -1.93
LSM5-206ENST00000409987 MCTS1Q9ULC4 181 aaKnown RBP2.99□□□□□ -1.93
LSM5-206ENST00000409987 ARID1AO14497 2285 aa2.99□□□□□ -1.93
LSM5-206ENST00000409987 TEX15Q9BXT5 2789 aa2.99□□□□□ -1.93
LSM5-206ENST00000409987 LRRC37AA6NMS7 1700 aa2.99□□□□□ -1.93
LSM5-206ENST00000409987 LTBP2Q14767 1821 aa2.98□□□□□ -1.93
LSM5-206ENST00000409987 ANKRD17O75179 2603 aaKnown RBP2.98□□□□□ -1.93
LSM5-206ENST00000409987 TENM4Q6N022 2769 aa2.98□□□□□ -1.93
LSM5-206ENST00000409987 PIEZO2Q9H5I5 2752 aa2.98□□□□□ -1.93
LSM5-206ENST00000409987 IGLV4-60A0A075B6I1 120 aa2.98□□□□□ -1.93
LSM5-206ENST00000409987 IGKV2-28A0A075B6P5 120 aa2.98□□□□□ -1.93
LSM5-206ENST00000409987 IGHV3-73A0A0B4J1V6 119 aa2.98□□□□□ -1.93
LSM5-206ENST00000409987 TRAV41A0A0B4J266 112 aa2.98□□□□□ -1.93
LSM5-206ENST00000409987 DUXBA0A1W2PPF3 345 aa2.98□□□□□ -1.93
LSM5-206ENST00000409987 C19orf71A6NCJ1 209 aa2.98□□□□□ -1.93
LSM5-206ENST00000409987 IGKV2D-28P01615 120 aa2.98□□□□□ -1.93
LSM5-206ENST00000409987 IL9P15248 144 aa2.98□□□□□ -1.93
LSM5-206ENST00000409987 CASP1P29466 404 aa2.98□□□□□ -1.93
LSM5-206ENST00000409987 ZNF80P51504 273 aaPredicted RBP2.98□□□□□ -1.93
LSM5-206ENST00000409987 EMP1P54849 157 aa2.98□□□□□ -1.93
LSM5-206ENST00000409987 KLF3P57682 345 aaPredicted RBP2.98□□□□□ -1.93
LSM5-206ENST00000409987 AKR1C1Q04828 323 aa2.98□□□□□ -1.93
LSM5-206ENST00000409987 KPRPQ5T749 579 aaPredicted RBP2.98□□□□□ -1.93
LSM5-206ENST00000409987 LCA10Q71F78 164 aa2.98□□□□□ -1.93
LSM5-206ENST00000409987 TCF24Q7RTU0 167 aa2.98□□□□□ -1.93
LSM5-206ENST00000409987 CLVS1Q8IUQ0 354 aaPredicted RBP2.98□□□□□ -1.93
LSM5-206ENST00000409987 OR9Q1Q8NGQ5 310 aa2.98□□□□□ -1.93
LSM5-206ENST00000409987 OR5J2Q8NH18 312 aa2.98□□□□□ -1.93
LSM5-206ENST00000409987 CLDND2Q8NHS1 167 aa2.98□□□□□ -1.93
LSM5-206ENST00000409987 LZICQ8WZA0 190 aa2.98□□□□□ -1.93
LSM5-206ENST00000409987 HSPB9Q9BQS6 159 aa2.98□□□□□ -1.93
LSM5-206ENST00000409987 TM2D3Q9BRN9 247 aa2.98□□□□□ -1.93
LSM5-206ENST00000409987 GSKIPQ9P0R6 139 aa2.98□□□□□ -1.93
LSM5-206ENST00000409987 LRRC37A2A6NM11 1700 aa2.98□□□□□ -1.93
LSM5-206ENST00000409987 TEP1Q99973 2627 aaKnown RBP2.98□□□□□ -1.93
LSM5-206ENST00000409987 MED23Q9ULK4 1368 aa2.98□□□□□ -1.93
LSM5-206ENST00000409987 COL4A6Q14031 1691 aa2.98□□□□□ -1.93
LSM5-206ENST00000409987 DOCK3Q8IZD9 2030 aa2.97□□□□□ -1.93
LSM5-206ENST00000409987 CELSR3Q9NYQ7 3312 aa2.97□□□□□ -1.93
LSM5-206ENST00000409987 DDX60Q8IY21 1712 aaKnown RBP2.97□□□□□ -1.93
LSM5-206ENST00000409987 LRCOL1A6NCL2 159 aa2.97□□□□□ -1.93
LSM5-206ENST00000409987 ARL5CA6NH57 179 aa2.97□□□□□ -1.93
LSM5-206ENST00000409987 TRAPPC2LH3BP13 241 aa2.97□□□□□ -1.93
LSM5-206ENST00000409987 LEPROTO15243 131 aa2.97□□□□□ -1.93
LSM5-206ENST00000409987 C1QAP02745 245 aa2.97□□□□□ -1.93
LSM5-206ENST00000409987 LPAR6P43657 344 aa2.97□□□□□ -1.93
LSM5-206ENST00000409987 HIST1H4AP62805 103 aaKnown RBP2.97□□□□□ -1.93
LSM5-206ENST00000409987 RPL18Q07020 188 aaKnown RBP2.97□□□□□ -1.93
LSM5-206ENST00000409987 BAMBIQ13145 260 aa2.97□□□□□ -1.93
LSM5-206ENST00000409987 BIKQ13323 160 aa2.97□□□□□ -1.93
LSM5-206ENST00000409987 TCEAL4Q96EI5 215 aa2.97□□□□□ -1.93
LSM5-206ENST00000409987 C16orf95Q9H693 158 aa2.97□□□□□ -1.93
LSM5-206ENST00000409987 LAMTOR3Q9UHA4 124 aa2.97□□□□□ -1.93
LSM5-206ENST00000409987 JPT1Q9UK76 154 aa2.97□□□□□ -1.93
LSM5-206ENST00000409987 ASB4Q9Y574 426 aa2.97□□□□□ -1.93
LSM5-206ENST00000409987 ANKRD36CQ5JPF3 1778 aa2.97□□□□□ -1.93
LSM5-206ENST00000409987 CNOT1A5YKK6 2376 aaKnown RBP2.96□□□□□ -1.94
LSM5-206ENST00000409987 IGSF10Q6WRI0 2623 aa2.96□□□□□ -1.94
LSM5-206ENST00000409987 PSME4Q14997 1843 aa2.96□□□□□ -1.94
LSM5-206ENST00000409987 DNHD1Q96M86 4753 aa2.96□□□□□ -1.94
LSM5-206ENST00000409987 LOC102725191A0A1B0GVB3 256 aa2.96□□□□□ -1.94
LSM5-206ENST00000409987 UBFD1O14562 309 aaKnown RBP2.96□□□□□ -1.94
LSM5-206ENST00000409987 GADD45GO95257 159 aa2.96□□□□□ -1.94
LSM5-206ENST00000409987 NPYP01303 97 aa2.96□□□□□ -1.94
LSM5-206ENST00000409987 SRIP30626 198 aa2.96□□□□□ -1.94
LSM5-206ENST00000409987 HTR4Q13639 388 aa2.96□□□□□ -1.94
LSM5-206ENST00000409987 MOBPQ13875 183 aa2.96□□□□□ -1.94
LSM5-206ENST00000409987 ZNF660Q6AZW8 331 aaPredicted RBP2.96□□□□□ -1.94
LSM5-206ENST00000409987 SPINT4Q6UDR6 99 aa2.96□□□□□ -1.94
LSM5-206ENST00000409987 KTN1-AS1Q86SY8 53 aa2.96□□□□□ -1.94
LSM5-206ENST00000409987 OR10P1Q8NGE3 313 aa2.96□□□□□ -1.94
LSM5-206ENST00000409987 OR5C1Q8NGR4 320 aa2.96□□□□□ -1.94
LSM5-206ENST00000409987 SMCR5Q8TEV8 140 aa2.96□□□□□ -1.94
LSM5-206ENST00000409987 THEM6Q8WUY1 208 aa2.96□□□□□ -1.94
LSM5-206ENST00000409987 SCRT1Q9BWW7 348 aa2.96□□□□□ -1.94
LSM5-206ENST00000409987 TTTY13Q9BZ97 58 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms