RNA–Protein interactions for RNA: ENST00000409809.5

COL6A3-206, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-206ENST00000409809 IGLV3-21P80748 117 aaPredicted RBP10.75□□□□□ -0.69
COL6A3-206ENST00000409809 ZC2HC1BQ5TFG8 222 aa10.75□□□□□ -0.69
COL6A3-206ENST00000409809 SPXQ9BT56 116 aa10.75□□□□□ -0.69
COL6A3-206ENST00000409809 CCL3P10147 92 aa10.75□□□□□ -0.69
COL6A3-206ENST00000409809 SLC25A28Q96A46 364 aa10.75□□□□□ -0.69
COL6A3-206ENST00000409809 SLX1AQ9BQ83 275 aa10.75□□□□□ -0.69
COL6A3-206ENST00000409809 SHISA3A0PJX4 238 aa10.75□□□□□ -0.69
COL6A3-206ENST00000409809 ZNF492Q9P255 531 aa10.75□□□□□ -0.69
COL6A3-206ENST00000409809 PRO1854Q9UHT4 67 aa10.75□□□□□ -0.69
COL6A3-206ENST00000409809 MALRD1Q5VYJ5 2156 aa10.75□□□□□ -0.69
COL6A3-206ENST00000409809 MYF5P13349 255 aa10.75□□□□□ -0.69
COL6A3-206ENST00000409809 GTSCR1Q86UQ5 136 aa10.75□□□□□ -0.69
COL6A3-206ENST00000409809 TOMM7Q9P0U1 55 aa10.75□□□□□ -0.69
COL6A3-206ENST00000409809 ETDBQ3ZM63 59 aa10.74□□□□□ -0.69
COL6A3-206ENST00000409809 NABP1Q96AH0 204 aa10.74□□□□□ -0.69
COL6A3-206ENST00000409809 DUX3Q96PT4 197 aa10.74□□□□□ -0.69
COL6A3-206ENST00000409809 KLRD1Q13241 179 aa10.74□□□□□ -0.69
COL6A3-206ENST00000409809 BVES-AS1Q5T3Y7 98 aa10.74□□□□□ -0.69
COL6A3-206ENST00000409809 LINC00114Q6XXX2 140 aa10.74□□□□□ -0.69
COL6A3-206ENST00000409809 SRSF8Q9BRL6 282 aaKnown RBP10.74□□□□□ -0.69
COL6A3-206ENST00000409809 BRWD3Q6RI45 1802 aa10.74□□□□□ -0.69
COL6A3-206ENST00000409809 C12orf77C9JDV5 145 aa10.74□□□□□ -0.69
COL6A3-206ENST00000409809 UCNP55089 124 aa10.74□□□□□ -0.69
COL6A3-206ENST00000409809 TCTEX1D4Q5JR98 221 aa10.74□□□□□ -0.69
COL6A3-206ENST00000409809 CEND1Q8N111 149 aa10.74□□□□□ -0.69
COL6A3-206ENST00000409809 SIGLEC8Q9NYZ4 499 aa10.74□□□□□ -0.69
COL6A3-206ENST00000409809 TIAF1O95411 115 aa10.74□□□□□ -0.69
COL6A3-206ENST00000409809 MORN2Q502X0 79 aa10.74□□□□□ -0.69
COL6A3-206ENST00000409809 MGAMO43451 1857 aa10.74□□□□□ -0.69
COL6A3-206ENST00000409809 CMC4P56277 68 aaPredicted RBP10.74□□□□□ -0.69
COL6A3-206ENST00000409809 LY6G5BQ8NDX9 201 aa10.74□□□□□ -0.69
COL6A3-206ENST00000409809 FAM60AQ9NP50 221 aa10.74□□□□□ -0.69
COL6A3-206ENST00000409809 HCSTQ9UBK5 93 aa10.74□□□□□ -0.69
COL6A3-206ENST00000409809 TCF20Q9UGU0 1960 aaKnown RBP10.74□□□□□ -0.69
COL6A3-206ENST00000409809 PF4V1P10720 104 aa10.74□□□□□ -0.69
COL6A3-206ENST00000409809 REPIN1Q9BWE0 567 aaKnown RBP10.74□□□□□ -0.69
COL6A3-206ENST00000409809 GATD1Q8NB37 220 aa10.73□□□□□ -0.69
COL6A3-206ENST00000409809 TREML4Q6UXN2 200 aa10.73□□□□□ -0.69
COL6A3-206ENST00000409809 GLMPQ8WWB7 406 aa10.73□□□□□ -0.69
COL6A3-206ENST00000409809 SHISA9B4DS77 424 aa10.73□□□□□ -0.69
COL6A3-206ENST00000409809 WFDC3Q8IUB2 231 aa10.73□□□□□ -0.69
COL6A3-206ENST00000409809 TRBV6-6A0A0A6YYG2 114 aa10.73□□□□□ -0.69
COL6A3-206ENST00000409809 TRAV8-3A0A0A6YYJ7 113 aa10.73□□□□□ -0.69
COL6A3-206ENST00000409809 HRKO00198 91 aa10.73□□□□□ -0.69
COL6A3-206ENST00000409809 NMSQ5H8A3 153 aa10.73□□□□□ -0.69
COL6A3-206ENST00000409809 FAM231DQ6ZW35 169 aa10.73□□□□□ -0.69
COL6A3-206ENST00000409809 RNASE4P34096 147 aaKnown RBP10.73□□□□□ -0.69
COL6A3-206ENST00000409809 COA6Q5JTJ3 125 aaKnown RBP10.73□□□□□ -0.69
COL6A3-206ENST00000409809 TMEM75Q8N9X5 138 aa10.73□□□□□ -0.69
COL6A3-206ENST00000409809 TRAV13-2A0A0B4J235 113 aa10.72□□□□□ -0.69
COL6A3-206ENST00000409809 YPEL3P61236 119 aaPredicted RBP10.72□□□□□ -0.69
COL6A3-206ENST00000409809 SAA1P0DJI8 122 aaPredicted RBP10.72□□□□□ -0.69
COL6A3-206ENST00000409809 TTTY12Q9BZ98 90 aa10.72□□□□□ -0.69
COL6A3-206ENST00000409809 A0A1W2PPE3 182 aa10.72□□□□□ -0.69
COL6A3-206ENST00000409809 C17orf98A8MV24 154 aa10.72□□□□□ -0.69
COL6A3-206ENST00000409809 RBM3P98179 157 aaKnown RBP10.72□□□□□ -0.69
COL6A3-206ENST00000409809 IL17RELQ6ZVW7 336 aa10.72□□□□□ -0.69
COL6A3-206ENST00000409809 SIGLEC12Q96PQ1 595 aa10.72□□□□□ -0.69
COL6A3-206ENST00000409809 A0A0J9YW62 118 aa10.72□□□□□ -0.69
COL6A3-206ENST00000409809 KNCNA6PVL3 124 aa10.72□□□□□ -0.69
COL6A3-206ENST00000409809 B9A039 149 aa10.72□□□□□ -0.69
COL6A3-206ENST00000409809 FOXS1O43638 330 aa10.72□□□□□ -0.69
COL6A3-206ENST00000409809 GLRXP35754 106 aa10.72□□□□□ -0.69
COL6A3-206ENST00000409809 LILRA6Q6PI73 481 aa10.72□□□□□ -0.69
COL6A3-206ENST00000409809 CD7P09564 240 aa10.72□□□□□ -0.69
COL6A3-206ENST00000409809 C18orf32Q8TCD1 76 aa10.72□□□□□ -0.69
COL6A3-206ENST00000409809 CT55Q8WUE5 264 aa10.72□□□□□ -0.69
COL6A3-206ENST00000409809 PLA2G3Q9NZ20 509 aa10.72□□□□□ -0.69
COL6A3-206ENST00000409809 ADCYAP1P18509 176 aa10.71□□□□□ -0.69
COL6A3-206ENST00000409809 RPP25LQ8N5L8 163 aaKnown RBP10.71□□□□□ -0.69
COL6A3-206ENST00000409809 EFEMP2O95967 443 aa10.71□□□□□ -0.69
COL6A3-206ENST00000409809 PMS2CLQ68D20 193 aa10.71□□□□□ -0.69
COL6A3-206ENST00000409809 Q6ZT83 130 aa10.71□□□□□ -0.69
COL6A3-206ENST00000409809 TMEM167AQ8TBQ9 72 aa10.71□□□□□ -0.69
COL6A3-206ENST00000409809 IGKV1-8A0A0C4DH67 115 aa10.71□□□□□ -0.69
COL6A3-206ENST00000409809 PAX4O43316 350 aa10.71□□□□□ -0.69
COL6A3-206ENST00000409809 WFDC1Q9HC57 220 aa10.71□□□□□ -0.69
COL6A3-206ENST00000409809 DPM3Q9P2X0 92 aa10.71□□□□□ -0.69
COL6A3-206ENST00000409809 DTX4Q9Y2E6 619 aa10.71□□□□□ -0.69
COL6A3-206ENST00000409809 C5orf47Q569G3 176 aa10.71□□□□□ -0.7
COL6A3-206ENST00000409809 C1orf210Q8IVY1 113 aa10.71□□□□□ -0.7
COL6A3-206ENST00000409809 DEFB125Q8N687 156 aa10.71□□□□□ -0.7
COL6A3-206ENST00000409809 PEMTQ9UBM1 199 aa10.71□□□□□ -0.7
COL6A3-206ENST00000409809 CENPVL1A0A0U1RR11 272 aa10.71□□□□□ -0.7
COL6A3-206ENST00000409809 RNF5Q99942 180 aa10.71□□□□□ -0.7
COL6A3-206ENST00000409809 LCN12Q6JVE5 192 aa10.7□□□□□ -0.7
COL6A3-206ENST00000409809 MRPL14Q6P1L8 145 aaKnown RBP10.7□□□□□ -0.7
COL6A3-206ENST00000409809 LINC00158P58513 81 aa10.7□□□□□ -0.7
COL6A3-206ENST00000409809 Q6ZS52 159 aa10.7□□□□□ -0.7
COL6A3-206ENST00000409809 MRPS18CQ9Y3D5 142 aaKnown RBP10.7□□□□□ -0.7
COL6A3-206ENST00000409809 IGKV3D-15A0A087WSY6 115 aa10.7□□□□□ -0.7
COL6A3-206ENST00000409809 IGKV3D-11A0A0A0MRZ8 115 aa10.7□□□□□ -0.7
COL6A3-206ENST00000409809 IGKV3-15P01624 115 aa10.7□□□□□ -0.7
COL6A3-206ENST00000409809 IGKV3-11P04433 115 aa10.7□□□□□ -0.7
COL6A3-206ENST00000409809 SLC25A16P16260 332 aa10.7□□□□□ -0.7
COL6A3-206ENST00000409809 H3BMG7 143 aa10.7□□□□□ -0.7
COL6A3-206ENST00000409809 FOXH1O75593 365 aa10.7□□□□□ -0.7
COL6A3-206ENST00000409809 RPL39P5Q59GN2 51 aa10.7□□□□□ -0.7
COL6A3-206ENST00000409809 LINC00477Q96M19 166 aa10.7□□□□□ -0.7
COL6A3-206ENST00000409809 DSCR8Q96T75 97 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms