RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 OR8I2Q8N0Y5 310 aa14.25□□□□□ -0.13
TSPAN4-209ENST00000409543 BPIFCQ8NFQ6 507 aa14.25□□□□□ -0.13
TSPAN4-209ENST00000409543 WDR12Q9GZL7 423 aaKnown RBP14.25□□□□□ -0.13
TSPAN4-209ENST00000409543 PMS2P5A8MQ11 134 aa14.24□□□□□ -0.13
TSPAN4-209ENST00000409543 SOCS3O14543 225 aa14.24□□□□□ -0.13
TSPAN4-209ENST00000409543 HLA-DRB4P13762 266 aa14.24□□□□□ -0.13
TSPAN4-209ENST00000409543 MIFP14174 115 aa14.24□□□□□ -0.13
TSPAN4-209ENST00000409543 PSMB3P49720 205 aa14.24□□□□□ -0.13
TSPAN4-209ENST00000409543 PAX9P55771 341 aa14.24□□□□□ -0.13
TSPAN4-209ENST00000409543 NANOS2P60321 138 aaKnown RBP14.24□□□□□ -0.13
TSPAN4-209ENST00000409543 IAH1Q2TAA2 248 aaPredicted RBP14.24□□□□□ -0.13
TSPAN4-209ENST00000409543 TMEM182Q6ZP80 229 aaPredicted RBP14.24□□□□□ -0.13
TSPAN4-209ENST00000409543 C1QTNF4Q9BXJ3 329 aa14.24□□□□□ -0.13
TSPAN4-209ENST00000409543 C20orf85Q9H1P6 137 aa14.24□□□□□ -0.13
TSPAN4-209ENST00000409543 HLA-DRB4X5D2U9 266 aa14.24□□□□□ -0.13
TSPAN4-209ENST00000409543 IGHV4-28A0A0C4DH34 117 aa14.23□□□□□ -0.13
TSPAN4-209ENST00000409543 GATA2P23769 480 aaPredicted RBP14.23□□□□□ -0.13
TSPAN4-209ENST00000409543 SAMD13Q5VXD3 122 aa14.23□□□□□ -0.13
TSPAN4-209ENST00000409543 ZBTB8BQ8NAP8 495 aaPredicted RBP14.23□□□□□ -0.13
TSPAN4-209ENST00000409543 LINC00052Q96N35 136 aa14.23□□□□□ -0.13
TSPAN4-209ENST00000409543 CLEC5AQ9NY25 188 aa14.23□□□□□ -0.13
TSPAN4-209ENST00000409543 TBC1D24Q9ULP9 559 aa14.23□□□□□ -0.13
TSPAN4-209ENST00000409543 X6R8D5 127 aa14.23□□□□□ -0.13
TSPAN4-209ENST00000409543 ZNF98A6NK75 572 aa14.22□□□□□ -0.13
TSPAN4-209ENST00000409543 TCRBP04435 133 aa14.22□□□□□ -0.13
TSPAN4-209ENST00000409543 RBMY1A1P0DJD3 496 aaKnown RBP14.22□□□□□ -0.13
TSPAN4-209ENST00000409543 RBMY1CP0DJD4 496 aa14.22□□□□□ -0.13
TSPAN4-209ENST00000409543 ORM2P19652 201 aa14.22□□□□□ -0.13
TSPAN4-209ENST00000409543 S100A7P31151 101 aa14.22□□□□□ -0.13
TSPAN4-209ENST00000409543 TAS2R30P59541 319 aa14.22□□□□□ -0.13
TSPAN4-209ENST00000409543 RBMY1FQ15415 496 aaKnown RBP14.22□□□□□ -0.13
TSPAN4-209ENST00000409543 TMEM14EPQ6UXP3 125 aa14.22□□□□□ -0.13
TSPAN4-209ENST00000409543 LINC00299Q6ZSB3 139 aa14.22□□□□□ -0.13
TSPAN4-209ENST00000409543 CCDC32Q9BV29 185 aa14.22□□□□□ -0.13
TSPAN4-209ENST00000409543 HRH4Q9H3N8 390 aa14.22□□□□□ -0.13
TSPAN4-209ENST00000409543 GSKIPQ9P0R6 139 aa14.22□□□□□ -0.13
TSPAN4-209ENST00000409543 SMCO3A2RU48 225 aa14.21□□□□□ -0.13
TSPAN4-209ENST00000409543 ISLRO14498 428 aa14.21□□□□□ -0.13
TSPAN4-209ENST00000409543 TSC22D2O75157 780 aa14.21□□□□□ -0.13
TSPAN4-209ENST00000409543 LY6G6CO95867 125 aa14.21□□□□□ -0.13
TSPAN4-209ENST00000409543 SCGB1D2O95969 90 aa14.21□□□□□ -0.13
TSPAN4-209ENST00000409543 GALR1P47211 349 aa14.21□□□□□ -0.13
TSPAN4-209ENST00000409543 MEOX2P50222 304 aa14.21□□□□□ -0.13
TSPAN4-209ENST00000409543 DLK1P80370 383 aa14.21□□□□□ -0.13
TSPAN4-209ENST00000409543 FOXI2Q6ZQN5 318 aa14.21□□□□□ -0.13
TSPAN4-209ENST00000409543 CYP2G1PQ6ZSU1 146 aa14.21□□□□□ -0.13
TSPAN4-209ENST00000409543 TMEM147Q9BVK8 224 aa14.21□□□□□ -0.13
TSPAN4-209ENST00000409543 SLC25A32Q9H2D1 315 aa14.21□□□□□ -0.13
TSPAN4-209ENST00000409543 SAV1Q9H4B6 383 aaPredicted RBP14.21□□□□□ -0.13
TSPAN4-209ENST00000409543 FNDC10F2Z333 226 aa14.2□□□□□ -0.14
TSPAN4-209ENST00000409543 METTL15P1P0C7V9 234 aa14.2□□□□□ -0.14
TSPAN4-209ENST00000409543 GDF5OSQ5U4N7 250 aa14.2□□□□□ -0.14
TSPAN4-209ENST00000409543 SPATA31B1PQ5VZV4 182 aa14.2□□□□□ -0.14
TSPAN4-209ENST00000409543 OR10P1Q8NGE3 313 aa14.2□□□□□ -0.14
TSPAN4-209ENST00000409543 OR1B1Q8NGR6 318 aa14.2□□□□□ -0.14
TSPAN4-209ENST00000409543 CLUHP3Q96NS8 147 aa14.2□□□□□ -0.14
TSPAN4-209ENST00000409543 SLC25A22Q9H936 323 aa14.2□□□□□ -0.14
TSPAN4-209ENST00000409543 XCL2Q9UBD3 114 aa14.2□□□□□ -0.14
TSPAN4-209ENST00000409543 TRAV6A0A075B6T7 132 aa14.19□□□□□ -0.14
TSPAN4-209ENST00000409543 CCNKO75909 580 aa14.19□□□□□ -0.14
TSPAN4-209ENST00000409543 MBPP02686 304 aaPredicted RBP14.19□□□□□ -0.14
TSPAN4-209ENST00000409543 IL5P05113 134 aa14.19□□□□□ -0.14
TSPAN4-209ENST00000409543 DEFB1P60022 68 aa14.19□□□□□ -0.14
TSPAN4-209ENST00000409543 SELENOTP62341 195 aa14.19□□□□□ -0.14
TSPAN4-209ENST00000409543 GPR82Q96P67 336 aa14.19□□□□□ -0.14
TSPAN4-209ENST00000409543 RSG1Q9BU20 258 aa14.19□□□□□ -0.14
TSPAN4-209ENST00000409543 NPVFQ9HCQ7 196 aa14.19□□□□□ -0.14
TSPAN4-209ENST00000409543 RCL1Q9Y2P8 373 aaKnown RBP14.19□□□□□ -0.14
TSPAN4-209ENST00000409543 RRAS2P62070 204 aaPredicted RBP14.18□□□□□ -0.14
TSPAN4-209ENST00000409543 ZNF846Q147U1 533 aa14.18□□□□□ -0.14
TSPAN4-209ENST00000409543 ZNF431Q8TF32 576 aaPredicted RBP14.18□□□□□ -0.14
TSPAN4-209ENST00000409543 C16orf92Q96LL3 132 aa14.18□□□□□ -0.14
TSPAN4-209ENST00000409543 C17orf77Q96MU5 243 aa14.18□□□□□ -0.14
TSPAN4-209ENST00000409543 NUDT15Q9NV35 164 aa14.18□□□□□ -0.14
TSPAN4-209ENST00000409543 C7orf66A4D0T2 115 aa14.17□□□□□ -0.14
TSPAN4-209ENST00000409543 K7EPK0 472 aa14.17□□□□□ -0.14
TSPAN4-209ENST00000409543 CCSO14618 274 aa14.17□□□□□ -0.14
TSPAN4-209ENST00000409543 HYPMO75409 117 aa14.17□□□□□ -0.14
TSPAN4-209ENST00000409543 IGKV3-20P01619 116 aa14.17□□□□□ -0.14
TSPAN4-209ENST00000409543 PLP1P60201 277 aa14.17□□□□□ -0.14
TSPAN4-209ENST00000409543 GSG1LQ6UXU4 331 aa14.17□□□□□ -0.14
TSPAN4-209ENST00000409543 MGAT4CQ9UBM8 478 aa14.17□□□□□ -0.14
TSPAN4-209ENST00000409543 ELOA3CA0A087WX78 387 aaPredicted RBP14.16□□□□□ -0.14
TSPAN4-209ENST00000409543 C11orf94C9JXX5 98 aa14.16□□□□□ -0.14
TSPAN4-209ENST00000409543 H3BRN7 92 aa14.16□□□□□ -0.14
TSPAN4-209ENST00000409543 H2AFB2P0C5Z0 115 aa14.16□□□□□ -0.14
TSPAN4-209ENST00000409543 LINC00869P0C866 280 aa14.16□□□□□ -0.14
TSPAN4-209ENST00000409543 RAP2BP61225 183 aa14.16□□□□□ -0.14
TSPAN4-209ENST00000409543 EBLN2Q6P2I7 272 aa14.16□□□□□ -0.14
TSPAN4-209ENST00000409543 TEPPQ6URK8 271 aa14.16□□□□□ -0.14
TSPAN4-209ENST00000409543 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.16□□□□□ -0.14
TSPAN4-209ENST00000409543 C2CD4CQ8TF44 421 aa14.16□□□□□ -0.14
TSPAN4-209ENST00000409543 SEC22CQ9BRL7 303 aa14.16□□□□□ -0.14
TSPAN4-209ENST00000409543 SHANK2-AS3Q9BTD1 123 aa14.16□□□□□ -0.14
TSPAN4-209ENST00000409543 GGACTQ9BVM4 153 aa14.16□□□□□ -0.14
TSPAN4-209ENST00000409543 SCRT1Q9BWW7 348 aa14.16□□□□□ -0.14
TSPAN4-209ENST00000409543 SLC25A39Q9BZJ4 359 aaPredicted RBP14.16□□□□□ -0.14
TSPAN4-209ENST00000409543 RPRMQ9NS64 109 aa14.16□□□□□ -0.14
TSPAN4-209ENST00000409543 DOK5Q9P104 306 aa14.16□□□□□ -0.14
TSPAN4-209ENST00000409543 HIGD1AQ9Y241 93 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms