RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 MYCNOSP40205 109 aa12.44□□□□□ -0.42
LIMS2-205ENST00000409455 KLF12Q9Y4X4 402 aa12.44□□□□□ -0.42
LIMS2-205ENST00000409455 SLC25A15Q9Y619 301 aa12.44□□□□□ -0.42
LIMS2-205ENST00000409455 MOSP00540 346 aa12.43□□□□□ -0.42
LIMS2-205ENST00000409455 IGLV1-44P01699 117 aa12.43□□□□□ -0.42
LIMS2-205ENST00000409455 CGB3P0DN86 165 aa12.43□□□□□ -0.42
LIMS2-205ENST00000409455 CGB7P0DN87 165 aa12.43□□□□□ -0.42
LIMS2-205ENST00000409455 RIPPLY3P57055 190 aa12.43□□□□□ -0.42
LIMS2-205ENST00000409455 SSBP2P81877 361 aaPredicted RBP12.43□□□□□ -0.42
LIMS2-205ENST00000409455 MBNL2Q5VZF2 373 aaKnown RBP12.43□□□□□ -0.42
LIMS2-205ENST00000409455 PATE2Q6UY27 113 aa12.43□□□□□ -0.42
LIMS2-205ENST00000409455 LINC00305Q7Z4B0 112 aa12.43□□□□□ -0.42
LIMS2-205ENST00000409455 STXBP6Q8NFX7 210 aa12.43□□□□□ -0.42
LIMS2-205ENST00000409455 BLNKQ8WV28 456 aa12.43□□□□□ -0.42
LIMS2-205ENST00000409455 MLST8Q9BVC4 326 aa12.43□□□□□ -0.42
LIMS2-205ENST00000409455 CHD8Q9HCK8 2581 aa12.43□□□□□ -0.42
LIMS2-205ENST00000409455 IGHV1-18A0A0C4DH31 117 aa12.43□□□□□ -0.42
LIMS2-205ENST00000409455 TCRBV4S1A1TA0A5B7 111 aa12.43□□□□□ -0.42
LIMS2-205ENST00000409455 FAM231BA6NCW3 169 aa12.43□□□□□ -0.42
LIMS2-205ENST00000409455 PGPA6NDG6 321 aa12.43□□□□□ -0.42
LIMS2-205ENST00000409455 PLAUP00749 431 aa12.43□□□□□ -0.42
LIMS2-205ENST00000409455 ZNF138P52744 262 aa12.43□□□□□ -0.42
LIMS2-205ENST00000409455 TMEM97Q5BJF2 176 aa12.43□□□□□ -0.42
LIMS2-205ENST00000409455 LINC00322Q6ZN03 302 aaPredicted RBP12.43□□□□□ -0.42
LIMS2-205ENST00000409455 C2orf91Q6ZV80 131 aa12.43□□□□□ -0.42
LIMS2-205ENST00000409455 FER1L6-AS1Q8NA97 138 aa12.43□□□□□ -0.42
LIMS2-205ENST00000409455 FMC1Q96HJ9 113 aa12.43□□□□□ -0.42
LIMS2-205ENST00000409455 ZNF492Q9P255 531 aa12.43□□□□□ -0.42
LIMS2-205ENST00000409455 SPTA1P02549 2419 aa12.42□□□□□ -0.42
LIMS2-205ENST00000409455 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.42□□□□□ -0.42
LIMS2-205ENST00000409455 A0A0G2JNJ9 132 aa12.42□□□□□ -0.42
LIMS2-205ENST00000409455 FAM27E3Q08E93 113 aa12.42□□□□□ -0.42
LIMS2-205ENST00000409455 Q9UFV3 132 aa12.42□□□□□ -0.42
LIMS2-205ENST00000409455 CT45A6P0DMU7 189 aa12.42□□□□□ -0.42
LIMS2-205ENST00000409455 CT45A5P0DMU8 189 aa12.42□□□□□ -0.42
LIMS2-205ENST00000409455 CT45A7P0DMV0 189 aa12.42□□□□□ -0.42
LIMS2-205ENST00000409455 NPIPB3Q92617 1050 aa12.42□□□□□ -0.42
LIMS2-205ENST00000409455 C19orf71A6NCJ1 209 aa12.41□□□□□ -0.42
LIMS2-205ENST00000409455 A6NDN8 102 aa12.41□□□□□ -0.42
LIMS2-205ENST00000409455 TIMM23BQ5SRD1 257 aa12.41□□□□□ -0.42
LIMS2-205ENST00000409455 ZC2HC1AQ96GY0 325 aa12.41□□□□□ -0.42
LIMS2-205ENST00000409455 TMUB1Q9BVT8 246 aa12.41□□□□□ -0.42
LIMS2-205ENST00000409455 FNDC4Q9H6D8 234 aaPredicted RBP12.41□□□□□ -0.42
LIMS2-205ENST00000409455 NDUFA4L2Q9NRX3 87 aa12.41□□□□□ -0.42
LIMS2-205ENST00000409455 SNAI2O43623 268 aa12.41□□□□□ -0.42
LIMS2-205ENST00000409455 FSTL3O95633 263 aa12.41□□□□□ -0.42
LIMS2-205ENST00000409455 LTAP01374 205 aa12.41□□□□□ -0.42
LIMS2-205ENST00000409455 CSN3P07498 182 aa12.41□□□□□ -0.42
LIMS2-205ENST00000409455 CFHR2P36980 270 aa12.41□□□□□ -0.42
LIMS2-205ENST00000409455 UFSP1Q6NVU6 142 aa12.41□□□□□ -0.42
LIMS2-205ENST00000409455 OR1B1Q8NGR6 318 aa12.41□□□□□ -0.42
LIMS2-205ENST00000409455 AP5S1Q9NUS5 200 aa12.41□□□□□ -0.42
LIMS2-205ENST00000409455 C22orf34Q6ZV56 151 aa12.4□□□□□ -0.42
LIMS2-205ENST00000409455 PERPQ96FX8 193 aa12.4□□□□□ -0.42
LIMS2-205ENST00000409455 PCNX1Q96RV3 2341 aa12.4□□□□□ -0.42
LIMS2-205ENST00000409455 C9orf118A6NHY6 69 aa12.4□□□□□ -0.42
LIMS2-205ENST00000409455 UQCRFS1P47985 274 aa12.4□□□□□ -0.42
LIMS2-205ENST00000409455 PAX2Q02962 417 aa12.4□□□□□ -0.42
LIMS2-205ENST00000409455 MOGAT3Q86VF5 341 aa12.4□□□□□ -0.42
LIMS2-205ENST00000409455 FAM169BQ8N8A8 192 aa12.4□□□□□ -0.42
LIMS2-205ENST00000409455 C5orf17Q8NAS9 161 aa12.4□□□□□ -0.42
LIMS2-205ENST00000409455 HARBI1Q96MB7 349 aa12.4□□□□□ -0.42
LIMS2-205ENST00000409455 CADP27708 2225 aa12.39□□□□□ -0.43
LIMS2-205ENST00000409455 G3V4G9 280 aa12.39□□□□□ -0.43
LIMS2-205ENST00000409455 H3BRM9 83 aa12.39□□□□□ -0.43
LIMS2-205ENST00000409455 OSR1Q8TAX0 266 aaPredicted RBP12.39□□□□□ -0.43
LIMS2-205ENST00000409455 RND1Q92730 232 aa12.39□□□□□ -0.43
LIMS2-205ENST00000409455 HEATR1Q9H583 2144 aaKnown RBP12.39□□□□□ -0.43
LIMS2-205ENST00000409455 HAX1O00165 279 aa12.39□□□□□ -0.43
LIMS2-205ENST00000409455 ORM2P19652 201 aa12.39□□□□□ -0.43
LIMS2-205ENST00000409455 COL8A1P27658 744 aa12.39□□□□□ -0.43
LIMS2-205ENST00000409455 CSN1S1P47710 185 aa12.39□□□□□ -0.43
LIMS2-205ENST00000409455 ITLN1Q8WWA0 313 aa12.39□□□□□ -0.43
LIMS2-205ENST00000409455 NEU4Q8WWR8 484 aaPredicted RBP12.39□□□□□ -0.43
LIMS2-205ENST00000409455 IGKV1D-37A0A075B6S9 117 aa12.38□□□□□ -0.43
LIMS2-205ENST00000409455 M0R1B8 84 aa12.38□□□□□ -0.43
LIMS2-205ENST00000409455 CIDEAO60543 219 aa12.38□□□□□ -0.43
LIMS2-205ENST00000409455 IGHV3-48P01763 117 aa12.38□□□□□ -0.43
LIMS2-205ENST00000409455 NBEAP1P0C6P0 100 aa12.38□□□□□ -0.43
LIMS2-205ENST00000409455 SUB1P53999 127 aaKnown RBP eCLIP12.38□□□□□ -0.43
LIMS2-205ENST00000409455 SLC25A48Q6ZT89 311 aaKnown RBP12.38□□□□□ -0.43
LIMS2-205ENST00000409455 THAP8Q8NA92 274 aa12.38□□□□□ -0.43
LIMS2-205ENST00000409455 ZNF747Q9BV97 191 aa12.38□□□□□ -0.43
LIMS2-205ENST00000409455 CHTOPQ9Y3Y2 248 aaKnown RBP12.38□□□□□ -0.43
LIMS2-205ENST00000409455 K7EP34 96 aa12.38□□□□□ -0.43
LIMS2-205ENST00000409455 APOHP02749 345 aaPredicted RBP12.38□□□□□ -0.43
LIMS2-205ENST00000409455 OR10AG1Q8NH19 301 aa12.38□□□□□ -0.43
LIMS2-205ENST00000409455 ATRXP46100 2492 aa12.37□□□□□ -0.43
LIMS2-205ENST00000409455 INS-IGF2F8WCM5 200 aa12.37□□□□□ -0.43
LIMS2-205ENST00000409455 TCRAP04437 139 aa12.37□□□□□ -0.43
LIMS2-205ENST00000409455 TMEM11P17152 192 aa12.37□□□□□ -0.43
LIMS2-205ENST00000409455 FA2HQ7L5A8 372 aa12.37□□□□□ -0.43
LIMS2-205ENST00000409455 NPIPB6E9PJ23 425 aa12.37□□□□□ -0.43
LIMS2-205ENST00000409455 H3BUT2 72 aa12.37□□□□□ -0.43
LIMS2-205ENST00000409455 FOXE3Q13461 319 aa12.37□□□□□ -0.43
LIMS2-205ENST00000409455 DPF1Q92782 380 aa12.37□□□□□ -0.43
LIMS2-205ENST00000409455 RABAC1Q9UI14 185 aa12.37□□□□□ -0.43
LIMS2-205ENST00000409455 RBPJQ06330 500 aa12.36□□□□□ -0.43
LIMS2-205ENST00000409455 JMJD8Q96S16 334 aa12.36□□□□□ -0.43
LIMS2-205ENST00000409455 ZNRD1Q9P1U0 126 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms