RNA–Protein interactions for RNA: ENST00000409212.5

SH3BP4-203, Transcript of SH3 domain binding protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SH3BP4, Length 5,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4-203ENST00000409212 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.98□□□□□ -0.33
SH3BP4-203ENST00000409212 HIST1H2BHQ93079 126 aa12.98□□□□□ -0.33
SH3BP4-203ENST00000409212 USMG5Q96IX5 58 aa12.98□□□□□ -0.33
SH3BP4-203ENST00000409212 HIST1H2BNQ99877 126 aa12.98□□□□□ -0.33
SH3BP4-203ENST00000409212 HIST1H2BMQ99879 126 aa12.98□□□□□ -0.33
SH3BP4-203ENST00000409212 LRRK1Q38SD2 2015 aa12.98□□□□□ -0.33
SH3BP4-203ENST00000409212 TCRAP04437 139 aa12.98□□□□□ -0.33
SH3BP4-203ENST00000409212 C1QL4Q86Z23 238 aa12.98□□□□□ -0.33
SH3BP4-203ENST00000409212 USF3Q68DE3 2245 aa12.97□□□□□ -0.33
SH3BP4-203ENST00000409212 LINC01549A6NIU2 74 aa12.97□□□□□ -0.33
SH3BP4-203ENST00000409212 C15orf62A8K5M9 175 aa12.97□□□□□ -0.33
SH3BP4-203ENST00000409212 PPIFP30405 207 aaKnown RBP12.97□□□□□ -0.33
SH3BP4-203ENST00000409212 NTF4P34130 210 aa12.97□□□□□ -0.33
SH3BP4-203ENST00000409212 FOXL1Q12952 345 aa12.97□□□□□ -0.33
SH3BP4-203ENST00000409212 BRD3OSQ6XYD6 125 aa12.97□□□□□ -0.33
SH3BP4-203ENST00000409212 CRIM1Q9NZV1 1036 aa12.97□□□□□ -0.33
SH3BP4-203ENST00000409212 ZNF407Q9C0G0 2248 aa12.97□□□□□ -0.33
SH3BP4-203ENST00000409212 RNASE1P07998 156 aaKnown RBP12.97□□□□□ -0.33
SH3BP4-203ENST00000409212 LMO1P25800 156 aa12.97□□□□□ -0.33
SH3BP4-203ENST00000409212 RPL15P61313 204 aaKnown RBP12.97□□□□□ -0.33
SH3BP4-203ENST00000409212 MRPL16Q9NX20 251 aaKnown RBP12.97□□□□□ -0.33
SH3BP4-203ENST00000409212 LYL1P12980 280 aa12.97□□□□□ -0.33
SH3BP4-203ENST00000409212 CD33P20138 364 aa12.97□□□□□ -0.33
SH3BP4-203ENST00000409212 KLF17Q5JT82 389 aaPredicted RBP12.97□□□□□ -0.33
SH3BP4-203ENST00000409212 TOMM7Q9P0U1 55 aa12.97□□□□□ -0.33
SH3BP4-203ENST00000409212 LINC01551Q86U37 167 aa12.96□□□□□ -0.33
SH3BP4-203ENST00000409212 EXOC3-AS1Q8N2X6 119 aa12.96□□□□□ -0.33
SH3BP4-203ENST00000409212 CHCHD1Q96BP2 118 aaKnown RBP12.96□□□□□ -0.33
SH3BP4-203ENST00000409212 BPESC1Q9GZL8 116 aa12.96□□□□□ -0.33
SH3BP4-203ENST00000409212 LY96Q9Y6Y9 160 aa12.96□□□□□ -0.33
SH3BP4-203ENST00000409212 TMEM8BA6NDV4 472 aa12.96□□□□□ -0.33
SH3BP4-203ENST00000409212 NDUFS8O00217 210 aa12.96□□□□□ -0.33
SH3BP4-203ENST00000409212 NDUFA3O95167 84 aa12.96□□□□□ -0.33
SH3BP4-203ENST00000409212 SCGB1A1P11684 91 aa12.96□□□□□ -0.33
SH3BP4-203ENST00000409212 C11orf44Q8N8P7 122 aa12.96□□□□□ -0.33
SH3BP4-203ENST00000409212 RNASE2P10153 161 aaKnown RBP12.96□□□□□ -0.34
SH3BP4-203ENST00000409212 GATA4P43694 442 aa12.96□□□□□ -0.34
SH3BP4-203ENST00000409212 LYPD1Q8N2G4 141 aa12.96□□□□□ -0.34
SH3BP4-203ENST00000409212 CREBBPQ92793 2442 aa12.96□□□□□ -0.34
SH3BP4-203ENST00000409212 SNAI2O43623 268 aa12.96□□□□□ -0.34
SH3BP4-203ENST00000409212 CA1P00915 261 aaPredicted RBP12.96□□□□□ -0.34
SH3BP4-203ENST00000409212 CNTFRP26992 372 aa12.96□□□□□ -0.34
SH3BP4-203ENST00000409212 ST6GALNAC6Q969X2 333 aa12.95□□□□□ -0.34
SH3BP4-203ENST00000409212 JKAMPQ9P055 326 aa12.95□□□□□ -0.34
SH3BP4-203ENST00000409212 IGKV2-40A0A087WW87 121 aaPredicted RBP12.95□□□□□ -0.34
SH3BP4-203ENST00000409212 A0A0G2JRQ6 117 aa12.95□□□□□ -0.34
SH3BP4-203ENST00000409212 IGKV2D-40P01614 121 aaPredicted RBP12.95□□□□□ -0.34
SH3BP4-203ENST00000409212 SRD5A1P18405 259 aa12.95□□□□□ -0.34
SH3BP4-203ENST00000409212 NCOR1P1Q9H4R4 102 aa12.95□□□□□ -0.34
SH3BP4-203ENST00000409212 CADP27708 2225 aa12.95□□□□□ -0.34
SH3BP4-203ENST00000409212 ZNF138P52744 262 aa12.95□□□□□ -0.34
SH3BP4-203ENST00000409212 DTX1Q86Y01 620 aa12.95□□□□□ -0.34
SH3BP4-203ENST00000409212 Q8TCH9 128 aa12.95□□□□□ -0.34
SH3BP4-203ENST00000409212 TDGF1P13385 188 aa12.95□□□□□ -0.34
SH3BP4-203ENST00000409212 CEACAM8P31997 349 aaPredicted RBP12.95□□□□□ -0.34
SH3BP4-203ENST00000409212 Q6ZRM9 215 aa12.95□□□□□ -0.34
SH3BP4-203ENST00000409212 GTSCR1Q86UQ5 136 aa12.95□□□□□ -0.34
SH3BP4-203ENST00000409212 TRGV4A0A0C4DH28 118 aa12.94□□□□□ -0.34
SH3BP4-203ENST00000409212 LY6HO94772 140 aa12.94□□□□□ -0.34
SH3BP4-203ENST00000409212 CFAP161Q6P656 301 aa12.94□□□□□ -0.34
SH3BP4-203ENST00000409212 KIR3DL3Q8N743 410 aa12.94□□□□□ -0.34
SH3BP4-203ENST00000409212 GSN-AS1Q9NRJ2 163 aa12.94□□□□□ -0.34
SH3BP4-203ENST00000409212 RASL11AQ6T310 242 aa12.94□□□□□ -0.34
SH3BP4-203ENST00000409212 FAM223BA6NKX1 122 aa12.94□□□□□ -0.34
SH3BP4-203ENST00000409212 DPM2O94777 84 aa12.94□□□□□ -0.34
SH3BP4-203ENST00000409212 FAM223AQ8IWN6 122 aa12.94□□□□□ -0.34
SH3BP4-203ENST00000409212 BEND2Q8NDZ0 799 aa12.94□□□□□ -0.34
SH3BP4-203ENST00000409212 HS3ST6Q96QI5 342 aa12.94□□□□□ -0.34
SH3BP4-203ENST00000409212 LINC00205P59089 165 aa12.93□□□□□ -0.34
SH3BP4-203ENST00000409212 LHFPL4Q7Z7J7 247 aa12.93□□□□□ -0.34
SH3BP4-203ENST00000409212 LINC01559Q495D7 138 aa12.93□□□□□ -0.34
SH3BP4-203ENST00000409212 NIT1Q86X76 327 aa12.93□□□□□ -0.34
SH3BP4-203ENST00000409212 LINC01356Q8N9X3 169 aa12.93□□□□□ -0.34
SH3BP4-203ENST00000409212 LINC00477Q96M19 166 aa12.93□□□□□ -0.34
SH3BP4-203ENST00000409212 TRAV9-2A0A087WT02 112 aa12.93□□□□□ -0.34
SH3BP4-203ENST00000409212 IGKV1-6A0A0C4DH72 117 aa12.93□□□□□ -0.34
SH3BP4-203ENST00000409212 TOMM40O96008 361 aa12.93□□□□□ -0.34
SH3BP4-203ENST00000409212 IGKV1-16P04430 117 aa12.93□□□□□ -0.34
SH3BP4-203ENST00000409212 SAA4P35542 130 aa12.93□□□□□ -0.34
SH3BP4-203ENST00000409212 NSUN5P1Q3KNT7 163 aa12.93□□□□□ -0.34
SH3BP4-203ENST00000409212 PRR30Q53SZ7 412 aaPredicted RBP12.93□□□□□ -0.34
SH3BP4-203ENST00000409212 COLCA2A8K830 154 aa12.92□□□□□ -0.34
SH3BP4-203ENST00000409212 TNFSF13O75888 250 aa12.92□□□□□ -0.34
SH3BP4-203ENST00000409212 DOCK7Q96N67 2140 aa12.92□□□□□ -0.34
SH3BP4-203ENST00000409212 GATA3P23771 443 aa12.92□□□□□ -0.34
SH3BP4-203ENST00000409212 PIP4P2Q8N4L2 257 aa12.92□□□□□ -0.34
SH3BP4-203ENST00000409212 IFI27L1Q96BM0 104 aa12.92□□□□□ -0.34
SH3BP4-203ENST00000409212 PTPRDP23468 1912 aa12.91□□□□□ -0.34
SH3BP4-203ENST00000409212 C1orf147Q96MC9 270 aaPredicted RBP12.91□□□□□ -0.34
SH3BP4-203ENST00000409212 TICRRQ7Z2Z1 1910 aa12.91□□□□□ -0.34
SH3BP4-203ENST00000409212 SAP30O75446 220 aa12.91□□□□□ -0.34
SH3BP4-203ENST00000409212 ZNF562Q6V9R5 426 aa12.91□□□□□ -0.34
SH3BP4-203ENST00000409212 DERL1Q9BUN8 251 aa12.91□□□□□ -0.34
SH3BP4-203ENST00000409212 WDR81Q562E7 1941 aa12.91□□□□□ -0.34
SH3BP4-203ENST00000409212 APOMO95445 188 aa12.91□□□□□ -0.34
SH3BP4-203ENST00000409212 CXCL1P09341 107 aa12.91□□□□□ -0.34
SH3BP4-203ENST00000409212 ZNF688P0C7X2 276 aa12.91□□□□□ -0.34
SH3BP4-203ENST00000409212 RPRMLQ8N4K4 120 aa12.91□□□□□ -0.34
SH3BP4-203ENST00000409212 TSC2P49815 1807 aa12.91□□□□□ -0.34
SH3BP4-203ENST00000409212 LOC105371267A0A1B0GV96 52 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms