RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 EVI2AP22794 236 aa14.51□□□□□ -0.09
SMPD4-202ENST00000409031 IGHV1-2P23083 117 aa14.51□□□□□ -0.09
SMPD4-202ENST00000409031 CENPVQ7Z7K6 275 aaPredicted RBP14.51□□□□□ -0.09
SMPD4-202ENST00000409031 SSBP2P81877 361 aaPredicted RBP14.51□□□□□ -0.09
SMPD4-202ENST00000409031 TMEM95Q3KNT9 176 aa14.51□□□□□ -0.09
SMPD4-202ENST00000409031 TRGV9Q99603 122 aa14.51□□□□□ -0.09
SMPD4-202ENST00000409031 ZNF492Q9P255 531 aa14.51□□□□□ -0.09
SMPD4-202ENST00000409031 WNK2Q9Y3S1 2297 aa14.51□□□□□ -0.09
SMPD4-202ENST00000409031 PRTN3P24158 256 aa14.51□□□□□ -0.09
SMPD4-202ENST00000409031 ZNF329Q86UD4 541 aa14.51□□□□□ -0.09
SMPD4-202ENST00000409031 A0A1W2PPM0 123 aa14.5□□□□□ -0.09
SMPD4-202ENST00000409031 PGPEP1Q9NXJ5 209 aa14.5□□□□□ -0.09
SMPD4-202ENST00000409031 VDAC2P45880 294 aaPredicted RBP14.5□□□□□ -0.09
SMPD4-202ENST00000409031 RCHY1Q96PM5 261 aa14.5□□□□□ -0.09
SMPD4-202ENST00000409031 NCR2O95944 276 aa14.5□□□□□ -0.09
SMPD4-202ENST00000409031 IGHV4-39P01824 125 aa14.5□□□□□ -0.09
SMPD4-202ENST00000409031 SP9P0CG40 484 aa14.5□□□□□ -0.09
SMPD4-202ENST00000409031 RHOGP84095 191 aa14.5□□□□□ -0.09
SMPD4-202ENST00000409031 ZNF48Q96MX3 618 aaPredicted RBP14.5□□□□□ -0.09
SMPD4-202ENST00000409031 PSMB11A5LHX3 300 aa14.5□□□□□ -0.09
SMPD4-202ENST00000409031 KLK10O43240 276 aa14.5□□□□□ -0.09
SMPD4-202ENST00000409031 AZU1P20160 251 aa14.5□□□□□ -0.09
SMPD4-202ENST00000409031 IFI27P40305 119 aaPredicted RBP14.5□□□□□ -0.09
SMPD4-202ENST00000409031 Q6ZVH6 145 aa14.5□□□□□ -0.09
SMPD4-202ENST00000409031 C1orf210Q8IVY1 113 aa14.5□□□□□ -0.09
SMPD4-202ENST00000409031 TFF1P04155 84 aa14.49□□□□□ -0.09
SMPD4-202ENST00000409031 SLC50A1Q9BRV3 221 aa14.49□□□□□ -0.09
SMPD4-202ENST00000409031 RPUSD1Q9UJJ7 312 aaKnown RBP14.49□□□□□ -0.09
SMPD4-202ENST00000409031 FAM90A27PA6NNH2 459 aa14.49□□□□□ -0.09
SMPD4-202ENST00000409031 GGNQ86UU5 652 aa14.49□□□□□ -0.09
SMPD4-202ENST00000409031 PPP1R27Q86WC6 154 aa14.49□□□□□ -0.09
SMPD4-202ENST00000409031 IGHV1-24A0A0C4DH33 117 aa14.49□□□□□ -0.09
SMPD4-202ENST00000409031 SRRM5B3KS81 715 aa14.49□□□□□ -0.09
SMPD4-202ENST00000409031 EEF1AKMT3Q96AZ1 226 aa14.49□□□□□ -0.09
SMPD4-202ENST00000409031 DIDO1Q9BTC0 2240 aaKnown RBP14.49□□□□□ -0.09
SMPD4-202ENST00000409031 TRAV8-1A0A0A6YYK1 113 aa14.48□□□□□ -0.09
SMPD4-202ENST00000409031 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.48□□□□□ -0.09
SMPD4-202ENST00000409031 H7C1H1 209 aa14.48□□□□□ -0.09
SMPD4-202ENST00000409031 TDRG1Q3Y452 100 aa14.48□□□□□ -0.09
SMPD4-202ENST00000409031 EXOC3-AS1Q8N2X6 119 aa14.48□□□□□ -0.09
SMPD4-202ENST00000409031 NPIPB5A8MRT5 1133 aa14.48□□□□□ -0.09
SMPD4-202ENST00000409031 TMPRSS3P57727 454 aa14.48□□□□□ -0.09
SMPD4-202ENST00000409031 RLFQ13129 1914 aa14.47□□□□□ -0.09
SMPD4-202ENST00000409031 ETV2O00321 342 aaPredicted RBP14.47□□□□□ -0.09
SMPD4-202ENST00000409031 NUPR1O60356 82 aa14.47□□□□□ -0.09
SMPD4-202ENST00000409031 LGALS9BQ3B8N2 356 aa14.47□□□□□ -0.09
SMPD4-202ENST00000409031 LGALS9CQ6DKI2 356 aa14.47□□□□□ -0.09
SMPD4-202ENST00000409031 S4R3C0 116 aa14.47□□□□□ -0.09
SMPD4-202ENST00000409031 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.47□□□□□ -0.09
SMPD4-202ENST00000409031 PMS2P5A8MQ11 134 aa14.47□□□□□ -0.09
SMPD4-202ENST00000409031 FOXG1P55316 489 aaPredicted RBP14.47□□□□□ -0.09
SMPD4-202ENST00000409031 FXYD7P58549 80 aa14.47□□□□□ -0.09
SMPD4-202ENST00000409031 TRIP6Q15654 476 aaKnown RBP14.47□□□□□ -0.09
SMPD4-202ENST00000409031 DPM3Q9P2X0 92 aa14.47□□□□□ -0.09
SMPD4-202ENST00000409031 TNS1Q9HBL0 1735 aaKnown RBP14.47□□□□□ -0.09
SMPD4-202ENST00000409031 IGHV3OR16-13A0A075B7E8 117 aa14.47□□□□□ -0.09
SMPD4-202ENST00000409031 IGHV3-74A0A0B4J1X5 117 aa14.47□□□□□ -0.09
SMPD4-202ENST00000409031 CCL3L1P16619 93 aa14.47□□□□□ -0.09
SMPD4-202ENST00000409031 ZNF562Q6V9R5 426 aa14.47□□□□□ -0.09
SMPD4-202ENST00000409031 LYPD1Q8N2G4 141 aa14.47□□□□□ -0.09
SMPD4-202ENST00000409031 TRAV2A0A0B4J234 112 aa14.46□□□□□ -0.09
SMPD4-202ENST00000409031 MAFAQ8NHW3 353 aaPredicted RBP14.46□□□□□ -0.09
SMPD4-202ENST00000409031 HS3ST6Q96QI5 342 aa14.46□□□□□ -0.09
SMPD4-202ENST00000409031 SIVA1O15304 175 aa14.46□□□□□ -0.09
SMPD4-202ENST00000409031 TMEM167AQ8TBQ9 72 aa14.46□□□□□ -0.09
SMPD4-202ENST00000409031 ATP5G2Q06055 141 aa14.46□□□□□ -0.09
SMPD4-202ENST00000409031 CLEC2AQ6UVW9 174 aa14.46□□□□□ -0.09
SMPD4-202ENST00000409031 AMN1Q8IY45 258 aa14.46□□□□□ -0.09
SMPD4-202ENST00000409031 RNASE2P10153 161 aaKnown RBP14.46□□□□□ -0.1
SMPD4-202ENST00000409031 LYPD6Q86Y78 171 aa14.46□□□□□ -0.1
SMPD4-202ENST00000409031 DEFB123Q8N688 67 aa14.46□□□□□ -0.1
SMPD4-202ENST00000409031 PPIFP30405 207 aaKnown RBP14.45□□□□□ -0.1
SMPD4-202ENST00000409031 LSM4Q9Y4Z0 139 aaKnown RBP14.45□□□□□ -0.1
SMPD4-202ENST00000409031 GGTLC3B5MD39 225 aa14.45□□□□□ -0.1
SMPD4-202ENST00000409031 ARMS2P0C7Q2 107 aa14.45□□□□□ -0.1
SMPD4-202ENST00000409031 C10orf55Q5SWW7 151 aa14.45□□□□□ -0.1
SMPD4-202ENST00000409031 COLCA1Q6ZS62 124 aa14.45□□□□□ -0.1
SMPD4-202ENST00000409031 LINC00205P59089 165 aa14.45□□□□□ -0.1
SMPD4-202ENST00000409031 Q86TA4 180 aa14.45□□□□□ -0.1
SMPD4-202ENST00000409031 PPDPFLQ8WWR9 84 aa14.45□□□□□ -0.1
SMPD4-202ENST00000409031 TMEM158Q8WZ71 300 aa14.45□□□□□ -0.1
SMPD4-202ENST00000409031 CHD3Q12873 2000 aaKnown RBP14.45□□□□□ -0.1
SMPD4-202ENST00000409031 SUMO2P61956 95 aaKnown RBP14.44□□□□□ -0.1
SMPD4-202ENST00000409031 YAE1D1Q9NRH1 226 aa14.44□□□□□ -0.1
SMPD4-202ENST00000409031 GVINP1Q7Z2Y8 2422 aa14.44□□□□□ -0.1
SMPD4-202ENST00000409031 CEACAM4O75871 244 aa14.44□□□□□ -0.1
SMPD4-202ENST00000409031 IGLV3-1P01715 115 aa14.44□□□□□ -0.1
SMPD4-202ENST00000409031 ATXN8Q156A1 80 aa14.44□□□□□ -0.1
SMPD4-202ENST00000409031 C17orf82Q86X59 251 aaPredicted RBP14.44□□□□□ -0.1
SMPD4-202ENST00000409031 ABCA7Q8IZY2 2146 aa14.44□□□□□ -0.1
SMPD4-202ENST00000409031 VGLL1Q99990 258 aa14.44□□□□□ -0.1
SMPD4-202ENST00000409031 DENND4AQ7Z401 1863 aa14.44□□□□□ -0.1
SMPD4-202ENST00000409031 CDX4O14627 284 aaPredicted RBP14.43□□□□□ -0.1
SMPD4-202ENST00000409031 PAX1P15863 534 aa14.43□□□□□ -0.1
SMPD4-202ENST00000409031 CFHR1Q03591 330 aa14.43□□□□□ -0.1
SMPD4-202ENST00000409031 MGAMO43451 1857 aa14.43□□□□□ -0.1
SMPD4-202ENST00000409031 TMEM155Q4W5P6 130 aa14.43□□□□□ -0.1
SMPD4-202ENST00000409031 WIPF2Q8TF74 440 aaPredicted RBP14.43□□□□□ -0.1
SMPD4-202ENST00000409031 ZNF524Q96C55 264 aa14.43□□□□□ -0.1
SMPD4-202ENST00000409031 INTS1Q8N201 2190 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms