RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 RXFP4Q8TDU9 374 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 TXN2Q99757 166 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 C19orf24Q9BVV8 132 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 SERTAD4Q9NUC0 356 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 GAR1Q9NY12 217 aaKnown RBP2.87□□□□□ -1.95
RTN4-208ENST00000404909 TECRQ9NZ01 308 aaKnown RBP2.87□□□□□ -1.95
RTN4-208ENST00000404909 IGHV3OR16-13A0A075B7E8 117 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 IGHV3-74A0A0B4J1X5 117 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 NUDT19A8MXV4 375 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 CLDN34H7C241 214 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 ZNF207O43670 478 aaKnown RBP2.87□□□□□ -1.95
RTN4-208ENST00000404909 OR2C1O95371 312 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 RNASE1P07998 156 aaKnown RBP2.87□□□□□ -1.95
RTN4-208ENST00000404909 STAG3L2P0CL84 134 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 STAG3L3P0CL85 134 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 C8orf88P0DMB2 117 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 PYYP10082 97 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 TAS2R45P59539 299 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 YPEL3P61236 119 aaPredicted RBP2.87□□□□□ -1.95
RTN4-208ENST00000404909 USF2Q15853 346 aaPredicted RBP2.87□□□□□ -1.95
RTN4-208ENST00000404909 CST9LP1Q5W188 147 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 KLHDC1Q8N7A1 406 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 IGHV3-49A0A0A0MS15 119 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 IGHV3-66A0A0C4DH42 116 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 ZNF320A2RRD8 509 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 C9JQL5 133 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 H3BTX0 84 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 PAGE4O60829 102 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 IFNA1P01562 189 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 GCHFRP30047 84 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 UBE2L3P68036 154 aaKnown RBP2.87□□□□□ -1.95
RTN4-208ENST00000404909 PEA15Q15121 130 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 KHDC3LQ587J8 217 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 TOMM20LQ6UXN7 152 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 ZNF600Q6ZNG1 722 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 Q8N2B8 174 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 COMMD1Q8N668 190 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 BLNKQ8WV28 456 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 LINC00052Q96N35 136 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 JMJD8Q96S16 334 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 SCRT1Q9BWW7 348 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 SLC25A2Q9BXI2 301 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 MRPL32Q9BYC8 188 aaKnown RBP2.87□□□□□ -1.95
RTN4-208ENST00000404909 SLC25A39Q9BZJ4 359 aaPredicted RBP2.87□□□□□ -1.95
RTN4-208ENST00000404909 TCF21O43680 179 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 SFTA3P0C7M3 94 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 BCL2P10415 239 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 S100A1P23297 94 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 PSMB3P49720 205 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 RELQ04864 619 aaPredicted RBP2.87□□□□□ -1.95
RTN4-208ENST00000404909 KLK9Q2XQG4 91 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 RNF2Q99496 336 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 PAXXQ9BUH6 204 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 ZNF580Q9UK33 172 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 KLK9Q9UKQ9 250 aa2.87□□□□□ -1.95
RTN4-208ENST00000404909 F8W036 122 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 BMPR1BO00238 502 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 CRLF1O75462 422 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 APOC3P02656 99 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 CD5P06127 495 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 ELANEP08246 267 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 PLP1P60201 277 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 RPL15P61313 204 aaKnown RBP2.86□□□□□ -1.95
RTN4-208ENST00000404909 FOXE3Q13461 319 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 UQCC3Q6UW78 93 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 PQLC2Q6ZP29 291 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 EIF4E3Q8N5X7 224 aaKnown RBP2.86□□□□□ -1.95
RTN4-208ENST00000404909 OR4F5Q8NH21 305 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 ZNF503Q96F45 646 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 FAM167A-AS1Q96KT0 104 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 OR4F4Q96R69 305 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 OR51M1Q9H341 326 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 PPP1R14DQ9NXH3 145 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 MRPL27Q9P0M9 148 aaKnown RBP2.86□□□□□ -1.95
RTN4-208ENST00000404909 PEF1Q9UBV8 284 aaKnown RBP2.86□□□□□ -1.95
RTN4-208ENST00000404909 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.86□□□□□ -1.95
RTN4-208ENST00000404909 LOC102723971A0A1B0GUV8 181 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 WI2-2373I1.2A0A1W2PRP0 233 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 A0A1W2PRX2 142 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 TMEM218A2RU14 115 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 C11orf94C9JXX5 98 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 ICAM4Q14773 271 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 DEFB136Q30KP8 78 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 ZNF343Q6P1L6 599 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 UNQ9165/PRO28630Q6UXU0 137 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 C18orf65Q6ZTR6 163 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 OR8I2Q8N0Y5 310 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 LINC01006Q8NI28 216 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 RABAC1Q9UI14 185 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 VAX2Q9UIW0 290 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 SELENOKQ9Y6D0 94 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 TENM1Q9UKZ4 2725 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 ZNF98A6NK75 572 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 GGCTO75223 188 aaKnown RBP2.86□□□□□ -1.95
RTN4-208ENST00000404909 BRI3O95415 125 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 ATP5G3P48201 142 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 RANP62826 216 aaKnown RBP2.86□□□□□ -1.95
RTN4-208ENST00000404909 MEF2BQ02080 365 aaPredicted RBP2.86□□□□□ -1.95
RTN4-208ENST00000404909 ZNF674Q2M3X9 581 aa2.86□□□□□ -1.95
RTN4-208ENST00000404909 RPEL1Q2QD12 228 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms