RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 SLC50A1Q9BRV3 221 aa1.47□□□□□ -2.17
HMGB1P17-201ENST00000403495 POPDC3Q9HBV1 291 aa1.47□□□□□ -2.17
HMGB1P17-201ENST00000403495 BCL2L10Q9HD36 194 aa1.47□□□□□ -2.17
HMGB1P17-201ENST00000403495 LAMTOR2Q9Y2Q5 125 aa1.47□□□□□ -2.17
HMGB1P17-201ENST00000403495 LHFPL6Q9Y693 200 aa1.47□□□□□ -2.17
HMGB1P17-201ENST00000403495 NCAPD3P42695 1498 aa1.47□□□□□ -2.17
HMGB1P17-201ENST00000403495 DOCK5Q9H7D0 1870 aa1.47□□□□□ -2.17
HMGB1P17-201ENST00000403495 RGS12O14924 1447 aa1.47□□□□□ -2.17
HMGB1P17-201ENST00000403495 RIMBP3CA6NJZ7 1639 aa1.47□□□□□ -2.17
HMGB1P17-201ENST00000403495 RIMBP3BA6NNM3 1639 aa1.47□□□□□ -2.17
HMGB1P17-201ENST00000403495 ZCCHC11Q5TAX3 1644 aaKnown RBP1.47□□□□□ -2.17
HMGB1P17-201ENST00000403495 RIMBP3Q9UFD9 1639 aa1.47□□□□□ -2.17
HMGB1P17-201ENST00000403495 COL5A3P25940 1745 aaPredicted RBP1.46□□□□□ -2.18
HMGB1P17-201ENST00000403495 PLXNA3P51805 1871 aa1.46□□□□□ -2.18
HMGB1P17-201ENST00000403495 COL11A1P12107 1806 aaPredicted RBP1.46□□□□□ -2.18
HMGB1P17-201ENST00000403495 TRAV3A0A0B4J244 114 aa1.46□□□□□ -2.18
HMGB1P17-201ENST00000403495 TRDV1A0A1B0GX56 115 aa1.46□□□□□ -2.18
HMGB1P17-201ENST00000403495 ARL5CA6NH57 179 aa1.46□□□□□ -2.18
HMGB1P17-201ENST00000403495 CST7O76096 145 aa1.46□□□□□ -2.18
HMGB1P17-201ENST00000403495 GADD45GO95257 159 aa1.46□□□□□ -2.18
HMGB1P17-201ENST00000403495 BCL2P10415 239 aa1.46□□□□□ -2.18
HMGB1P17-201ENST00000403495 SCGB1A1P11684 91 aa1.46□□□□□ -2.18
HMGB1P17-201ENST00000403495 HLA-EP13747 358 aa1.46□□□□□ -2.18
HMGB1P17-201ENST00000403495 RPL7P18124 248 aaKnown RBP1.46□□□□□ -2.18
HMGB1P17-201ENST00000403495 S100A11P31949 105 aa1.46□□□□□ -2.18
HMGB1P17-201ENST00000403495 ARPP19P56211 112 aa1.46□□□□□ -2.18
HMGB1P17-201ENST00000403495 ARPC4P59998 168 aa1.46□□□□□ -2.18
HMGB1P17-201ENST00000403495 ELOBQ15370 118 aa1.46□□□□□ -2.18
HMGB1P17-201ENST00000403495 ESRGQ1W209 222 aa1.46□□□□□ -2.18
HMGB1P17-201ENST00000403495 PRR15Q8IV56 129 aa1.46□□□□□ -2.18
HMGB1P17-201ENST00000403495 C9orf163Q8N9P6 203 aa1.46□□□□□ -2.18
HMGB1P17-201ENST00000403495 TMEM35BQ8NCS4 154 aa1.46□□□□□ -2.18
HMGB1P17-201ENST00000403495 OR9Q1Q8NGQ5 310 aa1.46□□□□□ -2.18
HMGB1P17-201ENST00000403495 CCDC115Q96NT0 180 aa1.46□□□□□ -2.18
HMGB1P17-201ENST00000403495 SPANXA1Q9NS26 97 aa1.46□□□□□ -2.18
HMGB1P17-201ENST00000403495 SMARCA4P51532 1647 aa1.46□□□□□ -2.18
HMGB1P17-201ENST00000403495 MUC19Q7Z5P9 8384 aa1.46□□□□□ -2.18
HMGB1P17-201ENST00000403495 SORL1Q92673 2214 aa1.46□□□□□ -2.18
HMGB1P17-201ENST00000403495 DOCK10Q96BY6 2186 aa1.45□□□□□ -2.18
HMGB1P17-201ENST00000403495 CEP164Q9UPV0 1460 aa1.45□□□□□ -2.18
HMGB1P17-201ENST00000403495 STRCP1A6NGW2 1772 aa1.45□□□□□ -2.18
HMGB1P17-201ENST00000403495 MEIKINA0A087WXM9 373 aa1.45□□□□□ -2.18
HMGB1P17-201ENST00000403495 TRAV1-1A0A0B4J248 108 aa1.45□□□□□ -2.18
HMGB1P17-201ENST00000403495 H7BYZ3 331 aa1.45□□□□□ -2.18
HMGB1P17-201ENST00000403495 PROSCO94903 275 aa1.45□□□□□ -2.18
HMGB1P17-201ENST00000403495 POLR2HP52434 150 aaKnown RBP1.45□□□□□ -2.18
HMGB1P17-201ENST00000403495 EIF3IQ13347 325 aaKnown RBP1.45□□□□□ -2.18
HMGB1P17-201ENST00000403495 HRCT1Q6UXD1 115 aa1.45□□□□□ -2.18
HMGB1P17-201ENST00000403495 LINC00301Q8NCQ3 95 aa1.45□□□□□ -2.18
HMGB1P17-201ENST00000403495 ZNF714Q96N38 554 aa1.45□□□□□ -2.18
HMGB1P17-201ENST00000403495 LINC00467Q9BRT7 94 aa1.45□□□□□ -2.18
HMGB1P17-201ENST00000403495 C6orf62Q9GZU0 229 aaPredicted RBP1.45□□□□□ -2.18
HMGB1P17-201ENST00000403495 OTORQ9NRC9 128 aa1.45□□□□□ -2.18
HMGB1P17-201ENST00000403495 HS3ST2Q9Y278 367 aa1.45□□□□□ -2.18
HMGB1P17-201ENST00000403495 MED31Q9Y3C7 131 aa1.45□□□□□ -2.18
HMGB1P17-201ENST00000403495 ECM29Q5VYK3 1845 aa1.45□□□□□ -2.18
HMGB1P17-201ENST00000403495 KIAA2026Q5HYC2 2103 aa1.45□□□□□ -2.18
HMGB1P17-201ENST00000403495 TRAV5A0A0B4J249 113 aa1.44□□□□□ -2.18
HMGB1P17-201ENST00000403495 A8MWV9 139 aa1.44□□□□□ -2.18
HMGB1P17-201ENST00000403495 GABARAPH6UMI1 98 aa1.44□□□□□ -2.18
HMGB1P17-201ENST00000403495 J3KT08 172 aa1.44□□□□□ -2.18
HMGB1P17-201ENST00000403495 K7ERJ3 54 aa1.44□□□□□ -2.18
HMGB1P17-201ENST00000403495 HIST1H2BKO60814 126 aa1.44□□□□□ -2.18
HMGB1P17-201ENST00000403495 UBL3O95164 117 aa1.44□□□□□ -2.18
HMGB1P17-201ENST00000403495 IFNA4P05014 189 aa1.44□□□□□ -2.18
HMGB1P17-201ENST00000403495 HIST1H2BJP06899 126 aa1.44□□□□□ -2.18
HMGB1P17-201ENST00000403495 ASAH2BP0C7U1 165 aa1.44□□□□□ -2.18
HMGB1P17-201ENST00000403495 BAALC-AS2P0C853 105 aa1.44□□□□□ -2.18
HMGB1P17-201ENST00000403495 GPX2P18283 190 aa1.44□□□□□ -2.18
HMGB1P17-201ENST00000403495 AKR1C3P42330 323 aa1.44□□□□□ -2.18
HMGB1P17-201ENST00000403495 RPL35P42766 123 aaKnown RBP1.44□□□□□ -2.18
HMGB1P17-201ENST00000403495 HBBP68871 147 aa1.44□□□□□ -2.18
HMGB1P17-201ENST00000403495 ZNF846Q147U1 533 aa1.44□□□□□ -2.18
HMGB1P17-201ENST00000403495 RNASE10Q5GAN6 216 aaKnown RBP1.44□□□□□ -2.18
HMGB1P17-201ENST00000403495 COA5Q86WW8 74 aa1.44□□□□□ -2.18
HMGB1P17-201ENST00000403495 OR4K15Q8NH41 348 aa1.44□□□□□ -2.18
HMGB1P17-201ENST00000403495 ZNF418Q8TF45 676 aaPredicted RBP1.44□□□□□ -2.18
HMGB1P17-201ENST00000403495 OR2H1Q9GZK4 316 aa1.44□□□□□ -2.18
HMGB1P17-201ENST00000403495 NAT8BQ9UHF3 227 aa1.44□□□□□ -2.18
HMGB1P17-201ENST00000403495 TRAPPC2LQ9UL33 140 aa1.44□□□□□ -2.18
HMGB1P17-201ENST00000403495 RNF11Q9Y3C5 154 aa1.44□□□□□ -2.18
HMGB1P17-201ENST00000403495 DISP1Q96F81 1524 aa1.44□□□□□ -2.18
HMGB1P17-201ENST00000403495 GLI3P10071 1580 aa1.43□□□□□ -2.18
HMGB1P17-201ENST00000403495 BCL9O00512 1426 aa1.43□□□□□ -2.18
HMGB1P17-201ENST00000403495 CRPP02741 224 aa1.43□□□□□ -2.18
HMGB1P17-201ENST00000403495 GPX1P07203 203 aa1.43□□□□□ -2.18
HMGB1P17-201ENST00000403495 OR10J4P0C629 311 aa1.43□□□□□ -2.18
HMGB1P17-201ENST00000403495 ZNF705BP0CI00 300 aaPredicted RBP1.43□□□□□ -2.18
HMGB1P17-201ENST00000403495 FABP2P12104 132 aa1.43□□□□□ -2.18
HMGB1P17-201ENST00000403495 MIFP14174 115 aa1.43□□□□□ -2.18
HMGB1P17-201ENST00000403495 RPS3P23396 243 aaKnown RBP eCLIP1.43□□□□□ -2.18
HMGB1P17-201ENST00000403495 SDC2P34741 201 aa1.43□□□□□ -2.18
HMGB1P17-201ENST00000403495 SSR2P43308 183 aa1.43□□□□□ -2.18
HMGB1P17-201ENST00000403495 PATE2Q6UY27 113 aa1.43□□□□□ -2.18
HMGB1P17-201ENST00000403495 OR5D16Q8NGK9 328 aa1.43□□□□□ -2.18
HMGB1P17-201ENST00000403495 ZC2HC1AQ96GY0 325 aa1.43□□□□□ -2.18
HMGB1P17-201ENST00000403495 TCEAL2Q9H3H9 227 aaPredicted RBP1.43□□□□□ -2.18
HMGB1P17-201ENST00000403495 CACYBPQ9HB71 228 aaKnown RBP1.43□□□□□ -2.18
HMGB1P17-201ENST00000403495 C14orf132Q9NPU4 83 aa1.43□□□□□ -2.18
HMGB1P17-201ENST00000403495 ARHGEF10O15013 1369 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms