RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 TMEM177Q53S58 311 aa13.66□□□□□ -0.22
SNRNP70-202ENST00000401730 CLEC7AQ9BXN2 247 aa13.66□□□□□ -0.22
SNRNP70-202ENST00000401730 TSPOP30536 169 aa13.66□□□□□ -0.22
SNRNP70-202ENST00000401730 TMEM167AQ8TBQ9 72 aa13.66□□□□□ -0.22
SNRNP70-202ENST00000401730 FXYD5Q96DB9 178 aa13.66□□□□□ -0.22
SNRNP70-202ENST00000401730 VWC2LB2RUY7 222 aa13.66□□□□□ -0.22
SNRNP70-202ENST00000401730 KLF17Q5JT82 389 aaPredicted RBP13.66□□□□□ -0.22
SNRNP70-202ENST00000401730 PGLYRP4Q96LB8 373 aa13.66□□□□□ -0.22
SNRNP70-202ENST00000401730 SPG11Q96JI7 2443 aa13.65□□□□□ -0.22
SNRNP70-202ENST00000401730 FAM90A27PA6NNH2 459 aa13.65□□□□□ -0.22
SNRNP70-202ENST00000401730 IGHV1-8P0DP01 117 aa13.65□□□□□ -0.22
SNRNP70-202ENST00000401730 SUB1P53999 127 aaKnown RBP eCLIP13.65□□□□□ -0.22
SNRNP70-202ENST00000401730 BPIFB3P59826 476 aa13.65□□□□□ -0.22
SNRNP70-202ENST00000401730 EXOC3-AS1Q8N2X6 119 aa13.65□□□□□ -0.22
SNRNP70-202ENST00000401730 KLHDC1Q8N7A1 406 aa13.65□□□□□ -0.22
SNRNP70-202ENST00000401730 TPPP3Q9BW30 176 aa13.65□□□□□ -0.22
SNRNP70-202ENST00000401730 INSIG2Q9Y5U4 225 aa13.65□□□□□ -0.22
SNRNP70-202ENST00000401730 M0R2Z0 102 aa13.65□□□□□ -0.22
SNRNP70-202ENST00000401730 Q0VG73 95 aa13.65□□□□□ -0.22
SNRNP70-202ENST00000401730 TSKUQ8WUA8 353 aa13.65□□□□□ -0.22
SNRNP70-202ENST00000401730 HILPDAQ9Y5L2 63 aa13.65□□□□□ -0.22
SNRNP70-202ENST00000401730 CTRLP40313 264 aa13.64□□□□□ -0.23
SNRNP70-202ENST00000401730 ZNF138P52744 262 aa13.64□□□□□ -0.23
SNRNP70-202ENST00000401730 CACNG8Q8WXS5 425 aa13.64□□□□□ -0.23
SNRNP70-202ENST00000401730 CLEC5AQ9NY25 188 aa13.64□□□□□ -0.23
SNRNP70-202ENST00000401730 NBEAP1P0C6P0 100 aa13.64□□□□□ -0.23
SNRNP70-202ENST00000401730 RPL27AP46776 148 aaKnown RBP13.64□□□□□ -0.23
SNRNP70-202ENST00000401730 UBE2V1Q13404 147 aa13.64□□□□□ -0.23
SNRNP70-202ENST00000401730 TBR1Q16650 682 aa13.64□□□□□ -0.23
SNRNP70-202ENST00000401730 ARL2-SNX15V9GYD0 113 aa13.64□□□□□ -0.23
SNRNP70-202ENST00000401730 MEF2CQ06413 473 aaPredicted RBP13.64□□□□□ -0.23
SNRNP70-202ENST00000401730 WDR73Q6P4I2 378 aa13.64□□□□□ -0.23
SNRNP70-202ENST00000401730 MRPL52Q86TS9 123 aaKnown RBP13.64□□□□□ -0.23
SNRNP70-202ENST00000401730 NIT1Q86X76 327 aa13.64□□□□□ -0.23
SNRNP70-202ENST00000401730 NUP37Q8NFH4 326 aa13.64□□□□□ -0.23
SNRNP70-202ENST00000401730 VSTM2AQ8TAG5 236 aa13.64□□□□□ -0.23
SNRNP70-202ENST00000401730 TMEM186Q96B77 213 aa13.64□□□□□ -0.23
SNRNP70-202ENST00000401730 SMIM27A0A1W2PRY6 76 aa13.63□□□□□ -0.23
SNRNP70-202ENST00000401730 IZUMO1RA6ND01 250 aa13.63□□□□□ -0.23
SNRNP70-202ENST00000401730 RPL19P84098 196 aaKnown RBP13.63□□□□□ -0.23
SNRNP70-202ENST00000401730 FBLN7Q53RD9 439 aa13.63□□□□□ -0.23
SNRNP70-202ENST00000401730 SPACA3Q8IXA5 215 aa13.63□□□□□ -0.23
SNRNP70-202ENST00000401730 OR1L4Q8NGR5 311 aa13.63□□□□□ -0.23
SNRNP70-202ENST00000401730 ZC2HC1AQ96GY0 325 aa13.63□□□□□ -0.23
SNRNP70-202ENST00000401730 COX11Q9Y6N1 276 aa13.63□□□□□ -0.23
SNRNP70-202ENST00000401730 LY96Q9Y6Y9 160 aa13.63□□□□□ -0.23
SNRNP70-202ENST00000401730 IGHV3OR16-8A0A075B7F1 116 aa13.63□□□□□ -0.23
SNRNP70-202ENST00000401730 IGHV1-69-2A0A0G2JMI3 117 aa13.63□□□□□ -0.23
SNRNP70-202ENST00000401730 IGLC7A0M8Q6 106 aa13.63□□□□□ -0.23
SNRNP70-202ENST00000401730 CNIH1O95406 144 aa13.63□□□□□ -0.23
SNRNP70-202ENST00000401730 PRRX1P54821 245 aa13.63□□□□□ -0.23
SNRNP70-202ENST00000401730 FOXC1Q12948 553 aa13.63□□□□□ -0.23
SNRNP70-202ENST00000401730 CIARTQ8N365 385 aaPredicted RBP13.63□□□□□ -0.23
SNRNP70-202ENST00000401730 C18orf32Q8TCD1 76 aa13.63□□□□□ -0.23
SNRNP70-202ENST00000401730 NCOR1P1Q9H4R4 102 aa13.63□□□□□ -0.23
SNRNP70-202ENST00000401730 LINC00574Q9H8X3 128 aa13.63□□□□□ -0.23
SNRNP70-202ENST00000401730 CSN3P07498 182 aa13.62□□□□□ -0.23
SNRNP70-202ENST00000401730 ARL6IP6Q8N6S5 226 aa13.62□□□□□ -0.23
SNRNP70-202ENST00000401730 Q8NA96 180 aa13.62□□□□□ -0.23
SNRNP70-202ENST00000401730 C17orf77Q96MU5 243 aa13.62□□□□□ -0.23
SNRNP70-202ENST00000401730 MRPL32Q9BYC8 188 aaKnown RBP13.62□□□□□ -0.23
SNRNP70-202ENST00000401730 ONECUT1Q9UBC0 465 aa13.62□□□□□ -0.23
SNRNP70-202ENST00000401730 EPDR1Q9UM22 224 aa13.62□□□□□ -0.23
SNRNP70-202ENST00000401730 ZNF596Q8TC21 504 aa13.62□□□□□ -0.23
SNRNP70-202ENST00000401730 MUC21A0A0G2JKD1 596 aa13.62□□□□□ -0.23
SNRNP70-202ENST00000401730 MUC21A0A140T8X8 626 aa13.62□□□□□ -0.23
SNRNP70-202ENST00000401730 HLA-DQA1P01909 254 aa13.62□□□□□ -0.23
SNRNP70-202ENST00000401730 ESDP10768 282 aa13.62□□□□□ -0.23
SNRNP70-202ENST00000401730 MUC21Q5SSG8 566 aa13.62□□□□□ -0.23
SNRNP70-202ENST00000401730 LDLRAD2Q5SZI1 272 aa13.62□□□□□ -0.23
SNRNP70-202ENST00000401730 PRNTQ86SH4 94 aa13.62□□□□□ -0.23
SNRNP70-202ENST00000401730 TMEM133Q9H2Q1 129 aa13.62□□□□□ -0.23
SNRNP70-202ENST00000401730 CELSR1Q9NYQ6 3014 aa13.61□□□□□ -0.23
SNRNP70-202ENST00000401730 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.61□□□□□ -0.23
SNRNP70-202ENST00000401730 FNDC10F2Z333 226 aa13.61□□□□□ -0.23
SNRNP70-202ENST00000401730 ANKRD39Q53RE8 183 aa13.61□□□□□ -0.23
SNRNP70-202ENST00000401730 SAPCD1Q5SSQ6 148 aa13.61□□□□□ -0.23
SNRNP70-202ENST00000401730 ORAOV1Q8WV07 137 aa13.61□□□□□ -0.23
SNRNP70-202ENST00000401730 LOC105371242A0A075B767 164 aa13.61□□□□□ -0.23
SNRNP70-202ENST00000401730 IGHV3-35A0A0C4DH35 117 aa13.61□□□□□ -0.23
SNRNP70-202ENST00000401730 MRGPRG-AS1Q2M3A8 158 aa13.61□□□□□ -0.23
SNRNP70-202ENST00000401730 IGHV2-26A0A0B4J1V2 119 aa13.6□□□□□ -0.23
SNRNP70-202ENST00000401730 IGHV3-23P01764 117 aa13.6□□□□□ -0.23
SNRNP70-202ENST00000401730 IGLL1P15814 213 aa13.6□□□□□ -0.23
SNRNP70-202ENST00000401730 ARF6P62330 175 aa13.6□□□□□ -0.23
SNRNP70-202ENST00000401730 GOLT1AQ6ZVE7 132 aa13.6□□□□□ -0.23
SNRNP70-202ENST00000401730 PNKDQ8N490 385 aa13.6□□□□□ -0.23
SNRNP70-202ENST00000401730 SHISA9B4DS77 424 aa13.6□□□□□ -0.23
SNRNP70-202ENST00000401730 PSG1P11464 419 aa13.6□□□□□ -0.23
SNRNP70-202ENST00000401730 TMEM155Q4W5P6 130 aa13.6□□□□□ -0.23
SNRNP70-202ENST00000401730 C19orf24Q9BVV8 132 aa13.6□□□□□ -0.23
SNRNP70-202ENST00000401730 Q9H3A6 140 aa13.6□□□□□ -0.23
SNRNP70-202ENST00000401730 TRAV9-1A0A075B6T8 112 aa13.59□□□□□ -0.23
SNRNP70-202ENST00000401730 MT-ND6P03923 174 aa13.59□□□□□ -0.23
SNRNP70-202ENST00000401730 MPV17L2Q567V2 206 aa13.59□□□□□ -0.23
SNRNP70-202ENST00000401730 RPEQ96AT9 228 aa13.59□□□□□ -0.23
SNRNP70-202ENST00000401730 PERPQ96FX8 193 aa13.59□□□□□ -0.23
SNRNP70-202ENST00000401730 OR8B2Q96RD0 313 aa13.59□□□□□ -0.23
SNRNP70-202ENST00000401730 PMCHL2Q9BQD1 86 aa13.59□□□□□ -0.23
SNRNP70-202ENST00000401730 TCTAP57738 103 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms