RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 KLF2Q9Y5W3 355 aaPredicted RBP11.66□□□□□ -0.54
PCDHA11-201ENST00000398640 IGKV1-12A0A0C4DH73 117 aa11.66□□□□□ -0.54
PCDHA11-201ENST00000398640 IGKV1D-12P01611 117 aa11.66□□□□□ -0.54
PCDHA11-201ENST00000398640 RNF182Q8N6D2 247 aa11.66□□□□□ -0.54
PCDHA11-201ENST00000398640 CD177Q8N6Q3 437 aa11.66□□□□□ -0.54
PCDHA11-201ENST00000398640 OR5A1Q8NGJ0 315 aa11.66□□□□□ -0.54
PCDHA11-201ENST00000398640 DEFB130BP0DP73 79 aa11.66□□□□□ -0.54
PCDHA11-201ENST00000398640 DEFB130AP0DP74 79 aa11.66□□□□□ -0.54
PCDHA11-201ENST00000398640 SLX1AQ9BQ83 275 aa11.66□□□□□ -0.54
PCDHA11-201ENST00000398640 KLHDC3Q9BQ90 382 aa11.66□□□□□ -0.54
PCDHA11-201ENST00000398640 RNF126Q9BV68 326 aa11.66□□□□□ -0.54
PCDHA11-201ENST00000398640 SCRT1Q9BWW7 348 aa11.66□□□□□ -0.54
PCDHA11-201ENST00000398640 PRORYQ9H606 182 aa11.66□□□□□ -0.54
PCDHA11-201ENST00000398640 CHTOPQ9Y3Y2 248 aaKnown RBP11.66□□□□□ -0.54
PCDHA11-201ENST00000398640 SERF1AO75920 110 aa11.66□□□□□ -0.54
PCDHA11-201ENST00000398640 MSMBP08118 114 aa11.66□□□□□ -0.54
PCDHA11-201ENST00000398640 SAA4P35542 130 aa11.66□□□□□ -0.54
PCDHA11-201ENST00000398640 CCL20P78556 96 aa11.66□□□□□ -0.54
PCDHA11-201ENST00000398640 CYSLTR1Q9Y271 337 aa11.66□□□□□ -0.54
PCDHA11-201ENST00000398640 OVOL1O14753 267 aa11.66□□□□□ -0.54
PCDHA11-201ENST00000398640 DMRTA1Q5VZB9 504 aa11.66□□□□□ -0.54
PCDHA11-201ENST00000398640 IGFL4Q6B9Z1 124 aa11.66□□□□□ -0.54
PCDHA11-201ENST00000398640 NABP1Q96AH0 204 aa11.66□□□□□ -0.54
PCDHA11-201ENST00000398640 RPUSD1Q9UJJ7 312 aaKnown RBP11.66□□□□□ -0.54
PCDHA11-201ENST00000398640 NOTCH4Q99466 2003 aa11.65□□□□□ -0.54
PCDHA11-201ENST00000398640 MINOS1Q5TGZ0 78 aa11.65□□□□□ -0.54
PCDHA11-201ENST00000398640 MINOS1-NBL1R4GNA1 71 aa11.65□□□□□ -0.54
PCDHA11-201ENST00000398640 DOCK8Q8NF50 2099 aa11.65□□□□□ -0.54
PCDHA11-201ENST00000398640 ATRAIDQ6UW56 229 aa11.65□□□□□ -0.54
PCDHA11-201ENST00000398640 TNFRSF14Q92956 283 aa11.65□□□□□ -0.54
PCDHA11-201ENST00000398640 KIF26AQ9ULI4 1882 aaPredicted RBP11.65□□□□□ -0.54
PCDHA11-201ENST00000398640 FAM186AA6NE01 2351 aa11.65□□□□□ -0.54
PCDHA11-201ENST00000398640 FANCMQ8IYD8 2048 aa11.65□□□□□ -0.55
PCDHA11-201ENST00000398640 SYNJ2BPP57105 145 aa11.64□□□□□ -0.55
PCDHA11-201ENST00000398640 CKS1BP61024 79 aa11.64□□□□□ -0.55
PCDHA11-201ENST00000398640 C2orf16Q68DN1 1984 aa11.64□□□□□ -0.55
PCDHA11-201ENST00000398640 S100A7L2Q5SY68 101 aa11.64□□□□□ -0.55
PCDHA11-201ENST00000398640 SPATA31B1PQ5VZV4 182 aa11.64□□□□□ -0.55
PCDHA11-201ENST00000398640 C5orf63A6NC05 138 aa11.64□□□□□ -0.55
PCDHA11-201ENST00000398640 PHLDA1Q8WV24 401 aaPredicted RBP11.64□□□□□ -0.55
PCDHA11-201ENST00000398640 M0R1W7 72 aa11.64□□□□□ -0.55
PCDHA11-201ENST00000398640 PSPNO60542 156 aa11.64□□□□□ -0.55
PCDHA11-201ENST00000398640 HBDP02042 147 aa11.64□□□□□ -0.55
PCDHA11-201ENST00000398640 PSG1P11464 419 aa11.64□□□□□ -0.55
PCDHA11-201ENST00000398640 TRAV9-1A0A075B6T8 112 aa11.64□□□□□ -0.55
PCDHA11-201ENST00000398640 TMEM155Q4W5P6 130 aa11.64□□□□□ -0.55
PCDHA11-201ENST00000398640 TRAV3A0A0B4J244 114 aa11.63□□□□□ -0.55
PCDHA11-201ENST00000398640 OCC1Q8TAD7 63 aa11.63□□□□□ -0.55
PCDHA11-201ENST00000398640 SPCS1Q9Y6A9 102 aa11.63□□□□□ -0.55
PCDHA11-201ENST00000398640 IGKV1-27A0A075B6S5 117 aa11.63□□□□□ -0.55
PCDHA11-201ENST00000398640 CD300EQ496F6 205 aaPredicted RBP11.63□□□□□ -0.55
PCDHA11-201ENST00000398640 NAPSAO96009 420 aa11.63□□□□□ -0.55
PCDHA11-201ENST00000398640 CR1LQ2VPA4 569 aa11.63□□□□□ -0.55
PCDHA11-201ENST00000398640 GAFA1Q96PS6 74 aa11.63□□□□□ -0.55
PCDHA11-201ENST00000398640 NHP2Q9NX24 153 aaKnown RBP11.63□□□□□ -0.55
PCDHA11-201ENST00000398640 SRRM5B3KS81 715 aa11.63□□□□□ -0.55
PCDHA11-201ENST00000398640 BUB1B-PAK6H3BSN5 160 aa11.63□□□□□ -0.55
PCDHA11-201ENST00000398640 NCR2O95944 276 aa11.63□□□□□ -0.55
PCDHA11-201ENST00000398640 LINC00518Q8N0U6 118 aa11.63□□□□□ -0.55
PCDHA11-201ENST00000398640 CST9LQ9H4G1 147 aa11.63□□□□□ -0.55
PCDHA11-201ENST00000398640 NRN1Q9NPD7 142 aa11.63□□□□□ -0.55
PCDHA11-201ENST00000398640 DMRT1Q9Y5R6 373 aa11.63□□□□□ -0.55
PCDHA11-201ENST00000398640 ESPL1Q14674 2120 aa11.63□□□□□ -0.55
PCDHA11-201ENST00000398640 FOXL1Q12952 345 aa11.63□□□□□ -0.55
PCDHA11-201ENST00000398640 TNFSF13O75888 250 aa11.62□□□□□ -0.55
PCDHA11-201ENST00000398640 LINC00205P59089 165 aa11.62□□□□□ -0.55
PCDHA11-201ENST00000398640 SRRM4A7MD48 611 aaKnown RBP11.62□□□□□ -0.55
PCDHA11-201ENST00000398640 CFHR3Q02985 330 aa11.62□□□□□ -0.55
PCDHA11-201ENST00000398640 ZNF362Q5T0B9 420 aaPredicted RBP11.62□□□□□ -0.55
PCDHA11-201ENST00000398640 SLC25A39Q9BZJ4 359 aaPredicted RBP11.62□□□□□ -0.55
PCDHA11-201ENST00000398640 F8VVB4 439 aa11.62□□□□□ -0.55
PCDHA11-201ENST00000398640 F8VWA3 439 aa11.62□□□□□ -0.55
PCDHA11-201ENST00000398640 DPM2O94777 84 aa11.62□□□□□ -0.55
PCDHA11-201ENST00000398640 RFNGQ9Y644 331 aa11.62□□□□□ -0.55
PCDHA11-201ENST00000398640 TMEM249Q2WGJ8 235 aa11.62□□□□□ -0.55
PCDHA11-201ENST00000398640 RNF144BQ7Z419 303 aa11.62□□□□□ -0.55
PCDHA11-201ENST00000398640 ZNF581Q9P0T4 197 aa11.62□□□□□ -0.55
PCDHA11-201ENST00000398640 FAM215AQ9Y5M1 114 aa11.62□□□□□ -0.55
PCDHA11-201ENST00000398640 H3BUT2 72 aa11.62□□□□□ -0.55
PCDHA11-201ENST00000398640 C1orf122Q6ZSJ8 110 aa11.62□□□□□ -0.55
PCDHA11-201ENST00000398640 A0A087WWC5 75 aa11.61□□□□□ -0.55
PCDHA11-201ENST00000398640 IGFL2Q6UWQ7 119 aa11.61□□□□□ -0.55
PCDHA11-201ENST00000398640 HEPN1Q6WQI6 88 aa11.61□□□□□ -0.55
PCDHA11-201ENST00000398640 ZNF876PQ49A33 203 aa11.61□□□□□ -0.55
PCDHA11-201ENST00000398640 RIF1Q5UIP0 2472 aaKnown RBP11.61□□□□□ -0.55
PCDHA11-201ENST00000398640 TREML4Q6UXN2 200 aa11.61□□□□□ -0.55
PCDHA11-201ENST00000398640 DMRTC2Q8IXT2 367 aaPredicted RBP11.61□□□□□ -0.55
PCDHA11-201ENST00000398640 Q8TAT8 98 aa11.61□□□□□ -0.55
PCDHA11-201ENST00000398640 TRBV7-1A0A0A6YYK4 115 aa11.61□□□□□ -0.55
PCDHA11-201ENST00000398640 J3QRE1 110 aa11.61□□□□□ -0.55
PCDHA11-201ENST00000398640 PROK2Q9HC23 129 aa11.61□□□□□ -0.55
PCDHA11-201ENST00000398640 SPTBN2O15020 2390 aa11.6□□□□□ -0.55
PCDHA11-201ENST00000398640 TRAV8-2A0A0B4J237 113 aa11.6□□□□□ -0.55
PCDHA11-201ENST00000398640 A0A1W2PRE2 83 aa11.6□□□□□ -0.55
PCDHA11-201ENST00000398640 DEFB113Q30KQ7 82 aa11.6□□□□□ -0.55
PCDHA11-201ENST00000398640 ORMDL2Q53FV1 153 aa11.6□□□□□ -0.55
PCDHA11-201ENST00000398640 REG4Q9BYZ8 158 aa11.6□□□□□ -0.55
PCDHA11-201ENST00000398640 DKK4Q9UBT3 224 aa11.6□□□□□ -0.55
PCDHA11-201ENST00000398640 PLXNA2O75051 1894 aa11.6□□□□□ -0.55
PCDHA11-201ENST00000398640 A8MXK9 166 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 147.2 ms