RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 SPATA25Q9BR10 227 aa4.09□□□□□ -1.76
SSR1-202ENST00000397511 NAA38Q9BRA0 125 aaKnown RBP4.09□□□□□ -1.76
SSR1-202ENST00000397511 ZNF71Q9NQZ8 489 aaPredicted RBP4.09□□□□□ -1.76
SSR1-202ENST00000397511 SPTBN1Q01082 2364 aaKnown RBP4.09□□□□□ -1.76
SSR1-202ENST00000397511 IGF2RP11717 2491 aa4.09□□□□□ -1.76
SSR1-202ENST00000397511 MPDU1O75352 247 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 GCHFRP30047 84 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 RPL8P62917 257 aaKnown RBP4.08□□□□□ -1.76
SSR1-202ENST00000397511 CT45A1Q5HYN5 189 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 ZNF474Q6S9Z5 364 aaPredicted RBP4.08□□□□□ -1.76
SSR1-202ENST00000397511 PQLC2Q6ZP29 291 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 C2orf91Q6ZV80 131 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 DOLPP1Q86YN1 238 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 CT45A3Q8NHU0 189 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 GCM1Q9NP62 436 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 RALYQ9UKM9 306 aaKnown RBP4.08□□□□□ -1.76
SSR1-202ENST00000397511 WDR83OSQ9Y284 106 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 PTPRBP23467 1997 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 TRAV17A0A0B4J275 112 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 PRR33A8MZF0 331 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 OR11H12B2RN74 326 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 H0Y8G0 127 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 GFRA3O60609 400 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 OR5AL1P0C617 328 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 P0C879 139 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 IGFBP2P18065 325 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 OPRK1P41145 380 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 EIF4EBP1Q13541 118 aaPredicted RBP4.08□□□□□ -1.76
SSR1-202ENST00000397511 FAM90A1Q86YD7 464 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 Q8N7P7 452 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 OR11H1Q8NG94 326 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 OR11H2Q8NH07 326 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 RAB37Q96AX2 223 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 CHCHD1Q96BP2 118 aaKnown RBP4.08□□□□□ -1.76
SSR1-202ENST00000397511 SGK494Q96LW2 274 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 IFI27L2Q9H2X8 130 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 MRPL16Q9NX20 251 aaKnown RBP4.08□□□□□ -1.76
SSR1-202ENST00000397511 CALYQ9NYX4 217 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 TCF19Q9Y242 345 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 CUL9Q8IWT3 2517 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 DYSFO75923 2080 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 SRRM5B3KS81 715 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 OR2J3O76001 311 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 AREGP15514 252 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 MFAP2P55001 183 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 LOXL3P58215 753 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 FAM120AOSQ5T036 256 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 ADAMTSL5Q6ZMM2 481 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 FOXI2Q6ZQN5 318 aa4.08□□□□□ -1.76
SSR1-202ENST00000397511 WNK2Q9Y3S1 2297 aa4.07□□□□□ -1.76
SSR1-202ENST00000397511 IGHV3-21A0A0B4J1V1 117 aa4.07□□□□□ -1.76
SSR1-202ENST00000397511 IGHV1-24A0A0C4DH33 117 aa4.07□□□□□ -1.76
SSR1-202ENST00000397511 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.07□□□□□ -1.76
SSR1-202ENST00000397511 SNAI2O43623 268 aa4.07□□□□□ -1.76
SSR1-202ENST00000397511 TSPAN13O95857 204 aa4.07□□□□□ -1.76
SSR1-202ENST00000397511 IGHG3P01860 377 aa4.07□□□□□ -1.76
SSR1-202ENST00000397511 CLEC3BP05452 202 aa4.07□□□□□ -1.76
SSR1-202ENST00000397511 CCL3L1P16619 93 aa4.07□□□□□ -1.76
SSR1-202ENST00000397511 DIAPH2-AS1Q14236 149 aa4.07□□□□□ -1.76
SSR1-202ENST00000397511 TIMM23BQ5SRD1 257 aa4.07□□□□□ -1.76
SSR1-202ENST00000397511 MIR17HGQ75NE6 70 aa4.07□□□□□ -1.76
SSR1-202ENST00000397511 SSX8Q7RTT4 187 aa4.07□□□□□ -1.76
SSR1-202ENST00000397511 STPG3Q8N7X2 389 aa4.07□□□□□ -1.76
SSR1-202ENST00000397511 H1FXQ92522 213 aaKnown RBP4.07□□□□□ -1.76
SSR1-202ENST00000397511 CCL17Q92583 94 aa4.07□□□□□ -1.76
SSR1-202ENST00000397511 GGTLC1Q9BX51 225 aa4.07□□□□□ -1.76
SSR1-202ENST00000397511 ENY2Q9NPA8 101 aa4.07□□□□□ -1.76
SSR1-202ENST00000397511 HSPB8Q9UJY1 196 aa4.07□□□□□ -1.76
SSR1-202ENST00000397511 HILPDAQ9Y5L2 63 aa4.07□□□□□ -1.76
SSR1-202ENST00000397511 SLC25A15Q9Y619 301 aa4.07□□□□□ -1.76
SSR1-202ENST00000397511 RAI1Q7Z5J4 1906 aaPredicted RBP4.07□□□□□ -1.76
SSR1-202ENST00000397511 ARHGAP32A7KAX9 2087 aa4.07□□□□□ -1.76
SSR1-202ENST00000397511 IGHV3-72A0A0B4J1Y9 119 aa4.07□□□□□ -1.76
SSR1-202ENST00000397511 SRRM4A7MD48 611 aaKnown RBP4.07□□□□□ -1.76
SSR1-202ENST00000397511 MGST3O14880 152 aa4.07□□□□□ -1.76
SSR1-202ENST00000397511 PLAUP00749 431 aa4.07□□□□□ -1.76
SSR1-202ENST00000397511 CA1P00915 261 aaPredicted RBP4.07□□□□□ -1.76
SSR1-202ENST00000397511 TNFAIP6P98066 277 aaPredicted RBP4.07□□□□□ -1.76
SSR1-202ENST00000397511 PSG5Q15238 335 aa4.07□□□□□ -1.76
SSR1-202ENST00000397511 EFNB3Q15768 340 aa4.07□□□□□ -1.76
SSR1-202ENST00000397511 SAMD5Q5TGI4 173 aa4.07□□□□□ -1.76
SSR1-202ENST00000397511 GRAMD2BQ96HH9 432 aa4.07□□□□□ -1.76
SSR1-202ENST00000397511 PGPEP1Q9NXJ5 209 aa4.07□□□□□ -1.76
SSR1-202ENST00000397511 SH2D7A6NKC9 451 aaPredicted RBP4.06□□□□□ -1.76
SSR1-202ENST00000397511 E7EUB6 86 aa4.06□□□□□ -1.76
SSR1-202ENST00000397511 KLK10O43240 276 aa4.06□□□□□ -1.76
SSR1-202ENST00000397511 C17orf58Q2M2W7 97 aa4.06□□□□□ -1.76
SSR1-202ENST00000397511 C10orf55Q5SWW7 151 aa4.06□□□□□ -1.76
SSR1-202ENST00000397511 TEPPQ6URK8 271 aa4.06□□□□□ -1.76
SSR1-202ENST00000397511 LINC00173Q6ZV60 143 aa4.06□□□□□ -1.76
SSR1-202ENST00000397511 C1orf159Q96HA4 380 aa4.06□□□□□ -1.76
SSR1-202ENST00000397511 LINC00479Q96M42 142 aa4.06□□□□□ -1.76
SSR1-202ENST00000397511 RABAC1Q9UI14 185 aa4.06□□□□□ -1.76
SSR1-202ENST00000397511 FAM215AQ9Y5M1 114 aa4.06□□□□□ -1.76
SSR1-202ENST00000397511 CHD8Q9HCK8 2581 aa4.06□□□□□ -1.76
SSR1-202ENST00000397511 IGKV1OR2-108A0A075B7D4 117 aa4.06□□□□□ -1.76
SSR1-202ENST00000397511 TRAV5A0A0B4J249 113 aa4.06□□□□□ -1.76
SSR1-202ENST00000397511 A0A1W2PRE2 83 aa4.06□□□□□ -1.76
SSR1-202ENST00000397511 A1L4Q6 167 aa4.06□□□□□ -1.76
SSR1-202ENST00000397511 FBLL1A6NHQ2 334 aaKnown RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms