RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 FRMD6-AS1P0C7T7 363 aa11□□□□□ -0.65
SEC13-208ENST00000397109 IGHV4-30-4P0DP06 118 aa11□□□□□ -0.65
SEC13-208ENST00000397109 RNASE2P10153 161 aaKnown RBP11□□□□□ -0.65
SEC13-208ENST00000397109 SUB1P53999 127 aaKnown RBP eCLIP11□□□□□ -0.651e-7■■■■■ 110.7
SEC13-208ENST00000397109 PEA15Q15121 130 aa11□□□□□ -0.65
SEC13-208ENST00000397109 Q56UQ5 140 aa11□□□□□ -0.65
SEC13-208ENST00000397109 TXN2Q99757 166 aa11□□□□□ -0.65
SEC13-208ENST00000397109 U3KQK5 164 aa11□□□□□ -0.65
SEC13-208ENST00000397109 I3L2K1 104 aa11□□□□□ -0.65
SEC13-208ENST00000397109 NDUFA4O00483 81 aa11□□□□□ -0.65
SEC13-208ENST00000397109 FCGR2BP31994 310 aaPredicted RBP11□□□□□ -0.65
SEC13-208ENST00000397109 PMS2P11Q13670 270 aa11□□□□□ -0.65
SEC13-208ENST00000397109 C2orf83Q53S99 150 aa11□□□□□ -0.65
SEC13-208ENST00000397109 C10orf91Q5T1B1 145 aa11□□□□□ -0.65
SEC13-208ENST00000397109 UNQ9165/PRO28630Q6UXU0 137 aa11□□□□□ -0.65
SEC13-208ENST00000397109 SBSPONQ8IVN8 264 aa11□□□□□ -0.65
SEC13-208ENST00000397109 ZNF709Q8N972 641 aa11□□□□□ -0.65
SEC13-208ENST00000397109 SLC24A4Q8NFF2 622 aa11□□□□□ -0.65
SEC13-208ENST00000397109 BPIFCQ8NFQ6 507 aa11□□□□□ -0.65
SEC13-208ENST00000397109 FAM213BQ8TBF2 198 aa11□□□□□ -0.65
SEC13-208ENST00000397109 MBD3L1Q8WWY6 194 aa11□□□□□ -0.65
SEC13-208ENST00000397109 LINC00052Q96N35 136 aa11□□□□□ -0.65
SEC13-208ENST00000397109 SEC11CQ9BY50 192 aa11□□□□□ -0.65
SEC13-208ENST00000397109 NPVFQ9HCQ7 196 aa11□□□□□ -0.65
SEC13-208ENST00000397109 C19orf73Q9NVV2 129 aa11□□□□□ -0.65
SEC13-208ENST00000397109 MRPL27Q9P0M9 148 aaKnown RBP11□□□□□ -0.65
SEC13-208ENST00000397109 IGHV3-35A0A0C4DH35 117 aa10.99□□□□□ -0.65
SEC13-208ENST00000397109 ZNF785A8K8V0 405 aa10.99□□□□□ -0.65
SEC13-208ENST00000397109 CORTO00230 105 aa10.99□□□□□ -0.65
SEC13-208ENST00000397109 NUPL2O15504 423 aaKnown RBP10.99□□□□□ -0.65
SEC13-208ENST00000397109 MT-CO2P00403 227 aa10.99□□□□□ -0.65
SEC13-208ENST00000397109 C8orf88P0DMB2 117 aa10.99□□□□□ -0.65
SEC13-208ENST00000397109 NPY1RP25929 384 aa10.99□□□□□ -0.65
SEC13-208ENST00000397109 RELQ04864 619 aaPredicted RBP10.99□□□□□ -0.65
SEC13-208ENST00000397109 TM4SF20Q53R12 229 aa10.99□□□□□ -0.65
SEC13-208ENST00000397109 TMEM41BQ5BJD5 291 aa10.99□□□□□ -0.65
SEC13-208ENST00000397109 TMEM170AQ8WVE7 144 aa10.99□□□□□ -0.65
SEC13-208ENST00000397109 TMEM190Q8WZ59 177 aa10.99□□□□□ -0.65
SEC13-208ENST00000397109 WWC2-AS2Q96NR7 200 aa10.99□□□□□ -0.65
SEC13-208ENST00000397109 TUBA4BQ9H853 241 aa10.99□□□□□ -0.65
SEC13-208ENST00000397109 KCNIP2Q9NS61 270 aa10.99□□□□□ -0.65
SEC13-208ENST00000397109 WDR83OSQ9Y284 106 aa10.99□□□□□ -0.65
SEC13-208ENST00000397109 TRAV25A0A0B4J276 109 aa10.98□□□□□ -0.65
SEC13-208ENST00000397109 PRSS46E5RG02 174 aa10.98□□□□□ -0.65
SEC13-208ENST00000397109 F8W735 103 aaPredicted RBP10.98□□□□□ -0.65
SEC13-208ENST00000397109 NDUFS6O75380 124 aaKnown RBP10.98□□□□□ -0.65
SEC13-208ENST00000397109 M6PRP20645 277 aa10.98□□□□□ -0.65
SEC13-208ENST00000397109 EDN2P20800 178 aa10.98□□□□□ -0.65
SEC13-208ENST00000397109 GUCA2BQ16661 112 aa10.98□□□□□ -0.65
SEC13-208ENST00000397109 CACNG8Q8WXS5 425 aa10.98□□□□□ -0.65
SEC13-208ENST00000397109 CHRDL1Q9BU40 450 aa10.98□□□□□ -0.65
SEC13-208ENST00000397109 ZMAT4Q9H898 229 aa10.98□□□□□ -0.65
SEC13-208ENST00000397109 DAZ1Q9NQZ3 744 aaKnown RBP10.98□□□□□ -0.65
SEC13-208ENST00000397109 UBE2L5PA0A1B0GUS4 154 aa10.97□□□□□ -0.65
SEC13-208ENST00000397109 K7EMT4 169 aa10.97□□□□□ -0.65
SEC13-208ENST00000397109 IFNA4P05014 189 aa10.97□□□□□ -0.65
SEC13-208ENST00000397109 CTSGP08311 255 aa10.97□□□□□ -0.65
SEC13-208ENST00000397109 ADMP35318 185 aa10.97□□□□□ -0.65
SEC13-208ENST00000397109 NPBWR1P48145 328 aa10.97□□□□□ -0.65
SEC13-208ENST00000397109 CD81P60033 236 aa10.97□□□□□ -0.65
SEC13-208ENST00000397109 RNASEH2CQ8TDP1 164 aaKnown RBP10.97□□□□□ -0.65
SEC13-208ENST00000397109 TREM1Q9NP99 234 aa10.97□□□□□ -0.65
SEC13-208ENST00000397109 MLXQ9UH92 298 aa10.97□□□□□ -0.65
SEC13-208ENST00000397109 CARHSP1Q9Y2V2 147 aaKnown RBP10.97□□□□□ -0.65
SEC13-208ENST00000397109 GNG7O60262 68 aa10.96□□□□□ -0.65
SEC13-208ENST00000397109 FGF7P21781 194 aa10.96□□□□□ -0.65
SEC13-208ENST00000397109 TAGLN2P37802 199 aaKnown RBP10.96□□□□□ -0.65
SEC13-208ENST00000397109 RAB31Q13636 194 aa10.96□□□□□ -0.65
SEC13-208ENST00000397109 GUK1Q16774 197 aa10.96□□□□□ -0.65
SEC13-208ENST00000397109 TMEM61Q8N0U2 210 aa10.96□□□□□ -0.65
SEC13-208ENST00000397109 SVBPQ8N300 66 aa10.96□□□□□ -0.65
SEC13-208ENST00000397109 NARS2Q96I59 477 aaKnown RBP10.96□□□□□ -0.65
SEC13-208ENST00000397109 RSG1Q9BU20 258 aa10.96□□□□□ -0.65
SEC13-208ENST00000397109 NPCDR1Q9BY65 106 aa10.96□□□□□ -0.65
SEC13-208ENST00000397109 GPX4P36969 197 aaPredicted RBP10.95□□□□□ -0.66
SEC13-208ENST00000397109 OPRK1P41145 380 aa10.95□□□□□ -0.66
SEC13-208ENST00000397109 FHITP49789 147 aa10.95□□□□□ -0.66
SEC13-208ENST00000397109 RBPMS2Q6ZRY4 209 aaKnown RBP10.95□□□□□ -0.66
SEC13-208ENST00000397109 SLC16A13Q7RTY0 426 aa10.95□□□□□ -0.66
SEC13-208ENST00000397109 C20orf24Q9BUV8 137 aa10.95□□□□□ -0.66
SEC13-208ENST00000397109 RPRMQ9NS64 109 aa10.95□□□□□ -0.66
SEC13-208ENST00000397109 F8W036 122 aa10.94□□□□□ -0.66
SEC13-208ENST00000397109 CD7P09564 240 aa10.94□□□□□ -0.66
SEC13-208ENST00000397109 ACOT6Q3I5F7 207 aaPredicted RBP10.94□□□□□ -0.66
SEC13-208ENST00000397109 TEPPQ6URK8 271 aa10.94□□□□□ -0.66
SEC13-208ENST00000397109 SFT2D1Q8WV19 159 aa10.94□□□□□ -0.66
SEC13-208ENST00000397109 SCRT1Q9BWW7 348 aa10.94□□□□□ -0.66
SEC13-208ENST00000397109 EIF5A2Q9GZV4 153 aaKnown RBP10.94□□□□□ -0.66
SEC13-208ENST00000397109 STAB2Q8WWQ8 2551 aa10.94□□□□□ -0.66
SEC13-208ENST00000397109 RBFOX3A6NFN3 312 aa10.93□□□□□ -0.66
SEC13-208ENST00000397109 SCGB2A1O75556 95 aa10.93□□□□□ -0.66
SEC13-208ENST00000397109 IGHV3-48P01763 117 aa10.93□□□□□ -0.66
SEC13-208ENST00000397109 APOC3P02656 99 aa10.93□□□□□ -0.66
SEC13-208ENST00000397109 KHDC3LQ587J8 217 aa10.93□□□□□ -0.66
SEC13-208ENST00000397109 TMEM144Q7Z5S9 345 aa10.93□□□□□ -0.66
SEC13-208ENST00000397109 RCHY1Q96PM5 261 aa10.93□□□□□ -0.66
SEC13-208ENST00000397109 TM2D3Q9BRN9 247 aa10.93□□□□□ -0.66
SEC13-208ENST00000397109 ACTR3CQ9C0K3 210 aaPredicted RBP10.93□□□□□ -0.66
SEC13-208ENST00000397109 FNDC4Q9H6D8 234 aaPredicted RBP10.93□□□□□ -0.66
SEC13-208ENST00000397109 SLC39A9Q9NUM3 307 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms