RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 RASL11BQ9BPW5 248 aa13.09□□□□□ -0.31
TRIM39-205ENST00000396551 SLC25A39Q9BZJ4 359 aaPredicted RBP13.09□□□□□ -0.31
TRIM39-205ENST00000396551 GPR6P46095 362 aaPredicted RBP13.09□□□□□ -0.31
TRIM39-205ENST00000396551 HES1Q14469 280 aa13.09□□□□□ -0.31
TRIM39-205ENST00000396551 C5orf64Q2M2E5 130 aa13.09□□□□□ -0.31
TRIM39-205ENST00000396551 KLF17Q5JT82 389 aaPredicted RBP13.09□□□□□ -0.31
TRIM39-205ENST00000396551 Q9H3A6 140 aa13.09□□□□□ -0.31
TRIM39-205ENST00000396551 MRPL27Q9P0M9 148 aaKnown RBP13.09□□□□□ -0.31
TRIM39-205ENST00000396551 NAT8BQ9UHF3 227 aa13.09□□□□□ -0.31
TRIM39-205ENST00000396551 CMTM2Q8TAZ6 248 aa13.09□□□□□ -0.31
TRIM39-205ENST00000396551 CSMD1Q96PZ7 3565 aa13.08□□□□□ -0.31
TRIM39-205ENST00000396551 CHD8Q9HCK8 2581 aa13.08□□□□□ -0.31
TRIM39-205ENST00000396551 IZUMO1RA6ND01 250 aa13.08□□□□□ -0.32
TRIM39-205ENST00000396551 SERF1AO75920 110 aa13.08□□□□□ -0.32
TRIM39-205ENST00000396551 HOXB4P17483 251 aaPredicted RBP13.08□□□□□ -0.32
TRIM39-205ENST00000396551 UBE2G1P62253 170 aa13.08□□□□□ -0.32
TRIM39-205ENST00000396551 PRR27Q6MZM9 219 aa13.08□□□□□ -0.32
TRIM39-205ENST00000396551 AMY1AP04745 511 aa13.08□□□□□ -0.32
TRIM39-205ENST00000396551 S100A7P31151 101 aa13.08□□□□□ -0.32
TRIM39-205ENST00000396551 WDR73Q6P4I2 378 aa13.08□□□□□ -0.32
TRIM39-205ENST00000396551 PRORYQ9H606 182 aa13.08□□□□□ -0.32
TRIM39-205ENST00000396551 ZNF586Q9NXT0 402 aa13.08□□□□□ -0.32
TRIM39-205ENST00000396551 NCOR2Q9Y618 2525 aa13.08□□□□□ -0.32
TRIM39-205ENST00000396551 MT-ND6P03923 174 aa13.07□□□□□ -0.32
TRIM39-205ENST00000396551 ESDP10768 282 aa13.07□□□□□ -0.32
TRIM39-205ENST00000396551 KIAA1644Q3SXP7 199 aa13.07□□□□□ -0.32
TRIM39-205ENST00000396551 C1orf122Q6ZSJ8 110 aa13.07□□□□□ -0.32
TRIM39-205ENST00000396551 C5orf17Q8NAS9 161 aa13.07□□□□□ -0.32
TRIM39-205ENST00000396551 A6NNC1 897 aa13.07□□□□□ -0.32
TRIM39-205ENST00000396551 NDPQ00604 133 aa13.07□□□□□ -0.32
TRIM39-205ENST00000396551 Q0VG73 95 aa13.07□□□□□ -0.32
TRIM39-205ENST00000396551 ZNF664Q8N3J9 261 aa13.07□□□□□ -0.32
TRIM39-205ENST00000396551 GRAMD2BQ96HH9 432 aa13.07□□□□□ -0.32
TRIM39-205ENST00000396551 MLST8Q9BVC4 326 aa13.07□□□□□ -0.32
TRIM39-205ENST00000396551 S4R3C0 116 aa13.07□□□□□ -0.32
TRIM39-205ENST00000396551 PAX1P15863 534 aa13.07□□□□□ -0.32
TRIM39-205ENST00000396551 KIR3DL3Q8N743 410 aa13.07□□□□□ -0.32
TRIM39-205ENST00000396551 TMEM14CQ9P0S9 112 aa13.07□□□□□ -0.32
TRIM39-205ENST00000396551 TCRAP04437 139 aa13.06□□□□□ -0.32
TRIM39-205ENST00000396551 RAB4BP61018 213 aa13.06□□□□□ -0.32
TRIM39-205ENST00000396551 LINC00322Q6ZN03 302 aaPredicted RBP13.06□□□□□ -0.32
TRIM39-205ENST00000396551 Q8N6K4 173 aa13.06□□□□□ -0.32
TRIM39-205ENST00000396551 UBTD1Q9HAC8 227 aa13.06□□□□□ -0.32
TRIM39-205ENST00000396551 GNB4Q9HAV0 340 aa13.06□□□□□ -0.32
TRIM39-205ENST00000396551 RPL19P84098 196 aaKnown RBP13.06□□□□□ -0.32
TRIM39-205ENST00000396551 GPR82Q96P67 336 aa13.06□□□□□ -0.32
TRIM39-205ENST00000396551 FANCD2OSQ96PS1 177 aa13.06□□□□□ -0.32
TRIM39-205ENST00000396551 ITPR1Q14643 2758 aa13.06□□□□□ -0.32
TRIM39-205ENST00000396551 UQCRFS1P47985 274 aa13.05□□□□□ -0.32
TRIM39-205ENST00000396551 COX19Q49B96 90 aa13.05□□□□□ -0.32
TRIM39-205ENST00000396551 SIRPDQ9H106 197 aa13.05□□□□□ -0.32
TRIM39-205ENST00000396551 TSTD3H0UI37 97 aa13.05□□□□□ -0.32
TRIM39-205ENST00000396551 TOMM40O96008 361 aa13.05□□□□□ -0.32
TRIM39-205ENST00000396551 NUP35Q8NFH5 326 aa13.05□□□□□ -0.32
TRIM39-205ENST00000396551 MS4A10Q96PG2 267 aa13.05□□□□□ -0.32
TRIM39-205ENST00000396551 BMPR1BO00238 502 aa13.05□□□□□ -0.32
TRIM39-205ENST00000396551 HIST1H1EP10412 219 aaKnown RBP13.05□□□□□ -0.32
TRIM39-205ENST00000396551 DDTP30046 118 aa13.05□□□□□ -0.32
TRIM39-205ENST00000396551 BAGE3Q86Y29 109 aa13.05□□□□□ -0.32
TRIM39-205ENST00000396551 ZNF491Q8N8L2 437 aa13.05□□□□□ -0.32
TRIM39-205ENST00000396551 ITLN2Q8WWU7 325 aaPredicted RBP13.05□□□□□ -0.32
TRIM39-205ENST00000396551 WNK2Q9Y3S1 2297 aa13.04□□□□□ -0.32
TRIM39-205ENST00000396551 IGLV11-55A0A075B6I3 123 aa13.04□□□□□ -0.32
TRIM39-205ENST00000396551 H3BRN7 92 aa13.04□□□□□ -0.32
TRIM39-205ENST00000396551 LTAP01374 205 aa13.04□□□□□ -0.32
TRIM39-205ENST00000396551 EXOC3-AS1Q8N2X6 119 aa13.04□□□□□ -0.32
TRIM39-205ENST00000396551 SMIM12Q96EX1 92 aa13.04□□□□□ -0.32
TRIM39-205ENST00000396551 FMC1Q96HJ9 113 aa13.04□□□□□ -0.32
TRIM39-205ENST00000396551 C19orf84I3L1E1 186 aa13.04□□□□□ -0.32
TRIM39-205ENST00000396551 HLA-DQA1P01909 254 aa13.04□□□□□ -0.32
TRIM39-205ENST00000396551 CD33P20138 364 aa13.04□□□□□ -0.32
TRIM39-205ENST00000396551 GDF5OSQ5U4N7 250 aa13.04□□□□□ -0.32
TRIM39-205ENST00000396551 ZNF562Q6V9R5 426 aa13.04□□□□□ -0.32
TRIM39-205ENST00000396551 Q6ZWC4 215 aa13.04□□□□□ -0.32
TRIM39-205ENST00000396551 Q71RC1 249 aaPredicted RBP13.04□□□□□ -0.32
TRIM39-205ENST00000396551 ARPC1AQ92747 370 aa13.04□□□□□ -0.32
TRIM39-205ENST00000396551 SHANK2-AS3Q9BTD1 123 aa13.04□□□□□ -0.32
TRIM39-205ENST00000396551 OTORQ9NRC9 128 aa13.04□□□□□ -0.32
TRIM39-205ENST00000396551 NPIPB5A8MRT5 1133 aa13.03□□□□□ -0.32
TRIM39-205ENST00000396551 VWC2LB2RUY7 222 aa13.03□□□□□ -0.32
TRIM39-205ENST00000396551 EBI3Q14213 229 aa13.03□□□□□ -0.32
TRIM39-205ENST00000396551 C17orf77Q96MU5 243 aa13.03□□□□□ -0.32
TRIM39-205ENST00000396551 NCBP2LA6PVI3 153 aaKnown RBP13.03□□□□□ -0.32
TRIM39-205ENST00000396551 IQCJQ1A5X6 159 aa13.03□□□□□ -0.32
TRIM39-205ENST00000396551 MINOS1Q5TGZ0 78 aa13.03□□□□□ -0.32
TRIM39-205ENST00000396551 CCDC144NLQ6NUI1 221 aa13.03□□□□□ -0.32
TRIM39-205ENST00000396551 BCL6BQ8N143 479 aaPredicted RBP13.03□□□□□ -0.32
TRIM39-205ENST00000396551 WIPF2Q8TF74 440 aaPredicted RBP13.03□□□□□ -0.32
TRIM39-205ENST00000396551 TSKUQ8WUA8 353 aa13.03□□□□□ -0.32
TRIM39-205ENST00000396551 MINOS1-NBL1R4GNA1 71 aa13.03□□□□□ -0.32
TRIM39-205ENST00000396551 F8W735 103 aaPredicted RBP13.03□□□□□ -0.32
TRIM39-205ENST00000396551 TPPP2P59282 170 aa13.03□□□□□ -0.32
TRIM39-205ENST00000396551 PAFAH1B2P68402 229 aa13.03□□□□□ -0.32
TRIM39-205ENST00000396551 SLAQ13239 276 aa13.03□□□□□ -0.32
TRIM39-205ENST00000396551 TRAV8-1A0A0A6YYK1 113 aa13.02□□□□□ -0.32
TRIM39-205ENST00000396551 OOSP1A8MZH6 123 aa13.02□□□□□ -0.32
TRIM39-205ENST00000396551 RNF125Q96EQ8 232 aa13.02□□□□□ -0.32
TRIM39-205ENST00000396551 ZNF331Q9NQX6 463 aaPredicted RBP13.02□□□□□ -0.32
TRIM39-205ENST00000396551 MED13LQ71F56 2210 aa13.02□□□□□ -0.33
TRIM39-205ENST00000396551 WI2-2373I1.2A0A1W2PRP0 233 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms