RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 NDPQ00604 133 aa12.72□□□□□ -0.37
SNX6-202ENST00000396526 FAM120AOSQ5T036 256 aa12.72□□□□□ -0.37
SNX6-202ENST00000396526 FAM110DQ8TAY7 271 aaPredicted RBP12.72□□□□□ -0.37
SNX6-202ENST00000396526 IGF2BP2-AS1Q96M15 143 aa12.72□□□□□ -0.37
SNX6-202ENST00000396526 GPR82Q96P67 336 aa12.72□□□□□ -0.37
SNX6-202ENST00000396526 COX6B1P14854 86 aa12.72□□□□□ -0.37
SNX6-202ENST00000396526 FCGR2BP31994 310 aaPredicted RBP12.72□□□□□ -0.37
SNX6-202ENST00000396526 ECSCRQ19T08 205 aa12.72□□□□□ -0.37
SNX6-202ENST00000396526 VN1R17PQ8TDU5 208 aa12.72□□□□□ -0.37
SNX6-202ENST00000396526 FMC1Q96HJ9 113 aa12.72□□□□□ -0.37
SNX6-202ENST00000396526 V9GYV3 84 aa12.72□□□□□ -0.37
SNX6-202ENST00000396526 ASPHD1Q5U4P2 390 aa12.72□□□□□ -0.37
SNX6-202ENST00000396526 WDR73Q6P4I2 378 aa12.72□□□□□ -0.37
SNX6-202ENST00000396526 TRBV9A0A0B4J1U6 114 aa12.71□□□□□ -0.37
SNX6-202ENST00000396526 MYCNOSP40205 109 aa12.71□□□□□ -0.37
SNX6-202ENST00000396526 RNASE7Q9H1E1 156 aaKnown RBP12.71□□□□□ -0.37
SNX6-202ENST00000396526 TRAV34A0A0B4J273 112 aa12.71□□□□□ -0.38
SNX6-202ENST00000396526 TMEM183AQ8IXX5 376 aa12.71□□□□□ -0.38
SNX6-202ENST00000396526 OR8I2Q8N0Y5 310 aa12.71□□□□□ -0.38
SNX6-202ENST00000396526 LYPD1Q8N2G4 141 aa12.71□□□□□ -0.38
SNX6-202ENST00000396526 DAZAP1Q96EP5 407 aaKnown RBP12.71□□□□□ -0.38
SNX6-202ENST00000396526 LINC00479Q96M42 142 aa12.71□□□□□ -0.38
SNX6-202ENST00000396526 S4R3C0 116 aa12.71□□□□□ -0.38
SNX6-202ENST00000396526 H3BRN7 92 aa12.7□□□□□ -0.38
SNX6-202ENST00000396526 GPR61Q9BZJ8 451 aa12.7□□□□□ -0.38
SNX6-202ENST00000396526 LRBAP50851 2863 aa12.7□□□□□ -0.38
SNX6-202ENST00000396526 NDUFB8O95169 186 aa12.7□□□□□ -0.38
SNX6-202ENST00000396526 GNG5P63218 68 aa12.7□□□□□ -0.38
SNX6-202ENST00000396526 PDZD11Q5EBL8 140 aa12.7□□□□□ -0.38
SNX6-202ENST00000396526 FAM231DQ6ZW35 169 aa12.7□□□□□ -0.38
SNX6-202ENST00000396526 HIST3H2BBQ8N257 126 aa12.7□□□□□ -0.38
SNX6-202ENST00000396526 PIP4P2Q8N4L2 257 aa12.7□□□□□ -0.38
SNX6-202ENST00000396526 MOB4Q9Y3A3 225 aa12.7□□□□□ -0.38
SNX6-202ENST00000396526 DOPEY1Q5JWR5 2465 aa12.7□□□□□ -0.38
SNX6-202ENST00000396526 PHOX2AO14813 284 aa12.7□□□□□ -0.38
SNX6-202ENST00000396526 MT-ND6P03923 174 aa12.7□□□□□ -0.38
SNX6-202ENST00000396526 TCRAP04437 139 aa12.7□□□□□ -0.38
SNX6-202ENST00000396526 AAMDCQ9H7C9 122 aa12.7□□□□□ -0.38
SNX6-202ENST00000396526 KLF12Q9Y4X4 402 aa12.7□□□□□ -0.38
SNX6-202ENST00000396526 TRAV40A0A0B4J280 105 aa12.69□□□□□ -0.38
SNX6-202ENST00000396526 WI2-2373I1.2A0A1W2PRP0 233 aa12.69□□□□□ -0.38
SNX6-202ENST00000396526 PRR27Q6MZM9 219 aa12.69□□□□□ -0.38
SNX6-202ENST00000396526 C7orf69Q9H7B7 122 aa12.69□□□□□ -0.38
SNX6-202ENST00000396526 NIT2Q9NQR4 276 aa12.69□□□□□ -0.38
SNX6-202ENST00000396526 IGLV2-8P01709 118 aa12.69□□□□□ -0.38
SNX6-202ENST00000396526 RPL7P18124 248 aaKnown RBP12.69□□□□□ -0.38
SNX6-202ENST00000396526 NHLRC2Q8NBF2 726 aa12.69□□□□□ -0.38
SNX6-202ENST00000396526 OR10D4PQ8NGN7 298 aa12.69□□□□□ -0.38
SNX6-202ENST00000396526 SPG11Q96JI7 2443 aa12.69□□□□□ -0.38
SNX6-202ENST00000396526 SMG1Q96Q15 3661 aaKnown RBP12.69□□□□□ -0.38
SNX6-202ENST00000396526 VWC2LB2RUY7 222 aa12.69□□□□□ -0.38
SNX6-202ENST00000396526 B4DSR2 109 aa12.69□□□□□ -0.38
SNX6-202ENST00000396526 H3BTX0 84 aa12.69□□□□□ -0.38
SNX6-202ENST00000396526 MSMBP08118 114 aa12.69□□□□□ -0.38
SNX6-202ENST00000396526 ZNF331Q9NQX6 463 aaPredicted RBP12.69□□□□□ -0.38
SNX6-202ENST00000396526 BMPR1BO00238 502 aa12.68□□□□□ -0.38
SNX6-202ENST00000396526 FABP4P15090 132 aa12.68□□□□□ -0.38
SNX6-202ENST00000396526 RPL15P61313 204 aaKnown RBP12.68□□□□□ -0.38
SNX6-202ENST00000396526 FBLN7Q53RD9 439 aa12.68□□□□□ -0.38
SNX6-202ENST00000396526 RABAC1Q9UI14 185 aa12.68□□□□□ -0.38
SNX6-202ENST00000396526 RELNP78509 3460 aa12.68□□□□□ -0.38
SNX6-202ENST00000396526 ITPR1Q14643 2758 aa12.68□□□□□ -0.38
SNX6-202ENST00000396526 IGHV4-30-2A0A087WSY4 118 aa12.68□□□□□ -0.38
SNX6-202ENST00000396526 ATP6V0E1O15342 81 aa12.68□□□□□ -0.38
SNX6-202ENST00000396526 CSN1S1P47710 185 aa12.68□□□□□ -0.38
SNX6-202ENST00000396526 COA6Q5JTJ3 125 aaKnown RBP12.68□□□□□ -0.38
SNX6-202ENST00000396526 ZNF586Q9NXT0 402 aa12.68□□□□□ -0.38
SNX6-202ENST00000396526 IGHV3OR16-10A0A075B7F0 116 aa12.67□□□□□ -0.38
SNX6-202ENST00000396526 OR2T8A6NH00 312 aa12.67□□□□□ -0.38
SNX6-202ENST00000396526 SLC25A16P16260 332 aa12.67□□□□□ -0.38
SNX6-202ENST00000396526 IER3P46695 156 aa12.67□□□□□ -0.38
SNX6-202ENST00000396526 RAB9AP51151 201 aa12.67□□□□□ -0.38
SNX6-202ENST00000396526 RHOGP84095 191 aa12.67□□□□□ -0.38
SNX6-202ENST00000396526 AJUBAQ96IF1 538 aa12.67□□□□□ -0.38
SNX6-202ENST00000396526 TRBV19A0A075B6N1 114 aa12.67□□□□□ -0.38
SNX6-202ENST00000396526 EGR2P11161 476 aaPredicted RBP12.67□□□□□ -0.38
SNX6-202ENST00000396526 GATA3P23771 443 aa12.67□□□□□ -0.38
SNX6-202ENST00000396526 RAB4BP61018 213 aa12.67□□□□□ -0.38
SNX6-202ENST00000396526 S100A12P80511 92 aa12.67□□□□□ -0.38
SNX6-202ENST00000396526 PDE6HQ13956 83 aa12.67□□□□□ -0.38
SNX6-202ENST00000396526 GRAMD2BQ96HH9 432 aa12.67□□□□□ -0.38
SNX6-202ENST00000396526 HSPB9Q9BQS6 159 aa12.67□□□□□ -0.38
SNX6-202ENST00000396526 SNURFLB1AK76 121 aa12.67□□□□□ -0.38
SNX6-202ENST00000396526 USF2Q15853 346 aaPredicted RBP12.67□□□□□ -0.38
SNX6-202ENST00000396526 C15orf32Q32M92 178 aa12.67□□□□□ -0.38
SNX6-202ENST00000396526 GNB1LQ9BYB4 327 aa12.67□□□□□ -0.38
SNX6-202ENST00000396526 EEF1AKMT3Q96AZ1 226 aa12.66□□□□□ -0.38
SNX6-202ENST00000396526 TMEM18Q96B42 140 aa12.66□□□□□ -0.38
SNX6-202ENST00000396526 IGHV3-23P01764 117 aa12.66□□□□□ -0.38
SNX6-202ENST00000396526 TCL1AP56279 114 aa12.66□□□□□ -0.38
SNX6-202ENST00000396526 GFI1BQ5VTD9 330 aa12.66□□□□□ -0.38
SNX6-202ENST00000396526 MRPL18Q9H0U6 180 aaKnown RBP12.66□□□□□ -0.38
SNX6-202ENST00000396526 MEGF9Q9H1U4 602 aa12.66□□□□□ -0.38
SNX6-202ENST00000396526 NAT8BQ9UHF3 227 aa12.66□□□□□ -0.38
SNX6-202ENST00000396526 HRNRQ86YZ3 2850 aaPredicted RBP12.66□□□□□ -0.38
SNX6-202ENST00000396526 PSG9Q00887 426 aa12.66□□□□□ -0.38
SNX6-202ENST00000396526 C9orf152Q5JTZ5 239 aa12.66□□□□□ -0.38
SNX6-202ENST00000396526 BRD3OSQ6XYD6 125 aa12.66□□□□□ -0.38
SNX6-202ENST00000396526 C5orf56Q8N8D9 126 aa12.66□□□□□ -0.38
SNX6-202ENST00000396526 NUDT10Q8NFP7 164 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms