RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 PIEZO1Q92508 2521 aa11.1□□□□□ -0.63
SNCA-204ENST00000394989 CELSR1Q9NYQ6 3014 aa11.1□□□□□ -0.63
SNCA-204ENST00000394989 HELTA6NFD8 242 aa11.1□□□□□ -0.63
SNCA-204ENST00000394989 LINC00310P59036 64 aa11.1□□□□□ -0.63
SNCA-204ENST00000394989 SELENOTP62341 195 aa11.1□□□□□ -0.63
SNCA-204ENST00000394989 RNF2Q99496 336 aa11.1□□□□□ -0.63
SNCA-204ENST00000394989 RNF5Q99942 180 aa11.1□□□□□ -0.63
SNCA-204ENST00000394989 GSX1Q9H4S2 264 aaPredicted RBP11.1□□□□□ -0.63
SNCA-204ENST00000394989 ZFP30Q9Y2G7 519 aa11.1□□□□□ -0.63
SNCA-204ENST00000394989 LY96Q9Y6Y9 160 aa11.1□□□□□ -0.63
SNCA-204ENST00000394989 CACNA1AO00555 2505 aa11.1□□□□□ -0.63
SNCA-204ENST00000394989 M0R1W7 72 aa11.1□□□□□ -0.63
SNCA-204ENST00000394989 ZFP36P26651 326 aaKnown RBP11.1□□□□□ -0.63
SNCA-204ENST00000394989 HNRNPA3P51991 378 aaKnown RBP11.1□□□□□ -0.63
SNCA-204ENST00000394989 GAGE1Q13065 139 aa11.1□□□□□ -0.63
SNCA-204ENST00000394989 LINC00305Q7Z4B0 112 aa11.1□□□□□ -0.63
SNCA-204ENST00000394989 OR10G8Q8NGN5 311 aa11.1□□□□□ -0.63
SNCA-204ENST00000394989 OR1L4Q8NGR5 311 aa11.1□□□□□ -0.63
SNCA-204ENST00000394989 ITLN2Q8WWU7 325 aaPredicted RBP11.1□□□□□ -0.63
SNCA-204ENST00000394989 M0QZ24 198 aa11.09□□□□□ -0.63
SNCA-204ENST00000394989 PRTN3P24158 256 aa11.09□□□□□ -0.63
SNCA-204ENST00000394989 LCN12Q6JVE5 192 aa11.09□□□□□ -0.63
SNCA-204ENST00000394989 FXYD5Q96DB9 178 aa11.09□□□□□ -0.63
SNCA-204ENST00000394989 A0A1W2PRD5 423 aa11.09□□□□□ -0.63
SNCA-204ENST00000394989 A0A1W2PRF3 423 aa11.09□□□□□ -0.63
SNCA-204ENST00000394989 A0A1W2PRM7 423 aa11.09□□□□□ -0.63
SNCA-204ENST00000394989 C19orf84I3L1E1 186 aa11.09□□□□□ -0.63
SNCA-204ENST00000394989 NDUFB8O95169 186 aa11.09□□□□□ -0.63
SNCA-204ENST00000394989 PAX2Q02962 417 aa11.09□□□□□ -0.63
SNCA-204ENST00000394989 C22orf15Q8WYQ4 148 aa11.09□□□□□ -0.63
SNCA-204ENST00000394989 TRGV9Q99603 122 aa11.09□□□□□ -0.63
SNCA-204ENST00000394989 TBL2Q9Y4P3 447 aaKnown RBP11.09□□□□□ -0.63
SNCA-204ENST00000394989 IGLV2-8P01709 118 aa11.08□□□□□ -0.64
SNCA-204ENST00000394989 ORM2P19652 201 aa11.08□□□□□ -0.64
SNCA-204ENST00000394989 GNG4P50150 75 aa11.08□□□□□ -0.64
SNCA-204ENST00000394989 BPIFB3P59826 476 aa11.08□□□□□ -0.64
SNCA-204ENST00000394989 PAXXQ9BUH6 204 aa11.08□□□□□ -0.64
SNCA-204ENST00000394989 ABCA1O95477 2261 aa11.08□□□□□ -0.64
SNCA-204ENST00000394989 PLGLAQ15195 96 aa11.08□□□□□ -0.64
SNCA-204ENST00000394989 DYNAPQ8N1N2 210 aa11.08□□□□□ -0.64
SNCA-204ENST00000394989 IGF2BP2-AS1Q96M15 143 aa11.08□□□□□ -0.64
SNCA-204ENST00000394989 NAT8BQ9UHF3 227 aa11.08□□□□□ -0.64
SNCA-204ENST00000394989 I3L2K1 104 aa11.08□□□□□ -0.64
SNCA-204ENST00000394989 FXYD3Q14802 87 aa11.08□□□□□ -0.64
SNCA-204ENST00000394989 ARL6IP6Q8N6S5 226 aa11.08□□□□□ -0.64
SNCA-204ENST00000394989 OR1B1Q8NGR6 318 aa11.08□□□□□ -0.64
SNCA-204ENST00000394989 LINC00479Q96M42 142 aa11.08□□□□□ -0.64
SNCA-204ENST00000394989 CORTO00230 105 aa11.07□□□□□ -0.64
SNCA-204ENST00000394989 GNLYP22749 145 aa11.07□□□□□ -0.64
SNCA-204ENST00000394989 ANKRD39Q53RE8 183 aa11.07□□□□□ -0.64
SNCA-204ENST00000394989 LEMD1Q68G75 181 aa11.07□□□□□ -0.64
SNCA-204ENST00000394989 TEX43Q6ZNM6 134 aa11.07□□□□□ -0.64
SNCA-204ENST00000394989 OR8I2Q8N0Y5 310 aa11.07□□□□□ -0.64
SNCA-204ENST00000394989 RCHY1Q96PM5 261 aa11.07□□□□□ -0.64
SNCA-204ENST00000394989 C20orf144Q9BQM9 153 aa11.07□□□□□ -0.64
SNCA-204ENST00000394989 V9GYV3 84 aa11.07□□□□□ -0.64
SNCA-204ENST00000394989 NBR2O15453 112 aa11.07□□□□□ -0.64
SNCA-204ENST00000394989 GPR6P46095 362 aaPredicted RBP11.07□□□□□ -0.64
SNCA-204ENST00000394989 RBX1P62877 108 aa11.07□□□□□ -0.64
SNCA-204ENST00000394989 VMO1Q7Z5L0 202 aa11.07□□□□□ -0.64
SNCA-204ENST00000394989 UBTD1Q9HAC8 227 aa11.07□□□□□ -0.64
SNCA-204ENST00000394989 LAMTOR2Q9Y2Q5 125 aa11.07□□□□□ -0.64
SNCA-204ENST00000394989 NDUFA3O95167 84 aa11.06□□□□□ -0.64
SNCA-204ENST00000394989 MRPL54Q6P161 138 aaKnown RBP11.06□□□□□ -0.64
SNCA-204ENST00000394989 NPBQ8NG41 125 aa11.06□□□□□ -0.64
SNCA-204ENST00000394989 IL36BQ9NZH7 164 aa11.06□□□□□ -0.64
SNCA-204ENST00000394989 ZNF329Q86UD4 541 aa11.06□□□□□ -0.64
SNCA-204ENST00000394989 VPS25Q9BRG1 176 aa11.06□□□□□ -0.64
SNCA-204ENST00000394989 RNASE7Q9H1E1 156 aaKnown RBP11.06□□□□□ -0.64
SNCA-204ENST00000394989 IGLC1P0CG04 106 aa11.06□□□□□ -0.64
SNCA-204ENST00000394989 CEACAM3P40198 252 aa11.06□□□□□ -0.64
SNCA-204ENST00000394989 MYCNOSP40205 109 aa11.06□□□□□ -0.64
SNCA-204ENST00000394989 ZC2HC1AQ96GY0 325 aa11.06□□□□□ -0.64
SNCA-204ENST00000394989 GNB4Q9HAV0 340 aa11.06□□□□□ -0.64
SNCA-204ENST00000394989 TIMM8BQ9Y5J9 83 aaPredicted RBP11.06□□□□□ -0.64
SNCA-204ENST00000394989 CNIH1O95406 144 aa11.05□□□□□ -0.64
SNCA-204ENST00000394989 VAMP3Q15836 100 aa11.05□□□□□ -0.64
SNCA-204ENST00000394989 OR4C5Q8NGB2 326 aa11.05□□□□□ -0.64
SNCA-204ENST00000394989 NRN1Q9NPD7 142 aa11.05□□□□□ -0.64
SNCA-204ENST00000394989 SERTAD4Q9NUC0 356 aa11.05□□□□□ -0.64
SNCA-204ENST00000394989 ZNF586Q9NXT0 402 aa11.05□□□□□ -0.64
SNCA-204ENST00000394989 IGSF10Q6WRI0 2623 aa11.05□□□□□ -0.64
SNCA-204ENST00000394989 ZNF253O75346 499 aa11.05□□□□□ -0.64
SNCA-204ENST00000394989 HOXB4P17483 251 aaPredicted RBP11.05□□□□□ -0.64
SNCA-204ENST00000394989 C1orf122Q6ZSJ8 110 aa11.05□□□□□ -0.64
SNCA-204ENST00000394989 PERPQ96FX8 193 aa11.05□□□□□ -0.64
SNCA-204ENST00000394989 ALKBH7Q9BT30 221 aaPredicted RBP11.05□□□□□ -0.64
SNCA-204ENST00000394989 HYPMO75409 117 aa11.04□□□□□ -0.64
SNCA-204ENST00000394989 PSG1P11464 419 aa11.04□□□□□ -0.64
SNCA-204ENST00000394989 PLP1P60201 277 aa11.04□□□□□ -0.64
SNCA-204ENST00000394989 FLNCQ14315 2725 aa11.04□□□□□ -0.64
SNCA-204ENST00000394989 CELSR2Q9HCU4 2923 aa11.04□□□□□ -0.64
SNCA-204ENST00000394989 MED13LQ71F56 2210 aa11.04□□□□□ -0.64
SNCA-204ENST00000394989 K7EIM0 57 aa11.04□□□□□ -0.64
SNCA-204ENST00000394989 KIR3DL3Q8N743 410 aa11.04□□□□□ -0.64
SNCA-204ENST00000394989 NHLRC2Q8NBF2 726 aa11.04□□□□□ -0.64
SNCA-204ENST00000394989 SRSF8Q9BRL6 282 aaKnown RBP11.04□□□□□ -0.64
SNCA-204ENST00000394989 CDC42EP3Q9UKI2 254 aa11.04□□□□□ -0.64
SNCA-204ENST00000394989 AKAP6Q13023 2319 aa11.04□□□□□ -0.64
SNCA-204ENST00000394989 GP9P14770 177 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms