RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 ZNF502Q8TBZ5 544 aa11.67□□□□□ -0.54
CCT4-201ENST00000394440 RNF125Q96EQ8 232 aa11.67□□□□□ -0.54
CCT4-201ENST00000394440 CXorf65A6NEN9 183 aa11.67□□□□□ -0.54
CCT4-201ENST00000394440 RHOGP84095 191 aa11.67□□□□□ -0.54
CCT4-201ENST00000394440 DEFB112Q30KQ8 113 aa11.67□□□□□ -0.54
CCT4-201ENST00000394440 RNF212Q495C1 297 aa11.67□□□□□ -0.54
CCT4-201ENST00000394440 C9orf139Q6ZV77 190 aa11.67□□□□□ -0.54
CCT4-201ENST00000394440 ZNF414Q96IQ9 312 aa11.67□□□□□ -0.54
CCT4-201ENST00000394440 TRAV41A0A0B4J266 112 aa11.66□□□□□ -0.54
CCT4-201ENST00000394440 CTSGP08311 255 aa11.66□□□□□ -0.54
CCT4-201ENST00000394440 C15orf32Q32M92 178 aa11.66□□□□□ -0.54
CCT4-201ENST00000394440 LINC01551Q86U37 167 aa11.66□□□□□ -0.54
CCT4-201ENST00000394440 H3BRN7 92 aa11.66□□□□□ -0.54
CCT4-201ENST00000394440 IGHV3-23P01764 117 aa11.66□□□□□ -0.54
CCT4-201ENST00000394440 IL4P05112 153 aa11.66□□□□□ -0.54
CCT4-201ENST00000394440 ADMP35318 185 aa11.66□□□□□ -0.54
CCT4-201ENST00000394440 MYCNOSP40205 109 aa11.66□□□□□ -0.54
CCT4-201ENST00000394440 SUMO1P63165 101 aaKnown RBP11.66□□□□□ -0.54
CCT4-201ENST00000394440 NECAP1Q8NC96 275 aa11.66□□□□□ -0.54
CCT4-201ENST00000394440 C2CD4CQ8TF44 421 aa11.66□□□□□ -0.54
CCT4-201ENST00000394440 TMEM14CQ9P0S9 112 aa11.66□□□□□ -0.54
CCT4-201ENST00000394440 LEMD1Q68G75 181 aa11.65□□□□□ -0.54
CCT4-201ENST00000394440 SHANK2-AS3Q9BTD1 123 aa11.65□□□□□ -0.54
CCT4-201ENST00000394440 ELOVL1Q9BW60 279 aa11.65□□□□□ -0.54
CCT4-201ENST00000394440 CTDSP1Q9GZU7 261 aa11.65□□□□□ -0.54
CCT4-201ENST00000394440 OR2T8A6NH00 312 aa11.65□□□□□ -0.54
CCT4-201ENST00000394440 C9JCJ5 164 aa11.65□□□□□ -0.54
CCT4-201ENST00000394440 MT-ND4LP03901 98 aa11.65□□□□□ -0.54
CCT4-201ENST00000394440 CRYBB3P26998 211 aa11.65□□□□□ -0.54
CCT4-201ENST00000394440 USF2Q15853 346 aaPredicted RBP11.65□□□□□ -0.54
CCT4-201ENST00000394440 FAM24BQ8N5W8 94 aa11.65□□□□□ -0.54
CCT4-201ENST00000394440 CHRDL1Q9BU40 450 aa11.65□□□□□ -0.54
CCT4-201ENST00000394440 ATF4P18848 351 aaPredicted RBP11.64□□□□□ -0.55
CCT4-201ENST00000394440 Q8WTZ3 238 aa11.64□□□□□ -0.55
CCT4-201ENST00000394440 CCDC140Q96MF4 163 aa11.64□□□□□ -0.55
CCT4-201ENST00000394440 CLDN34H7C241 214 aa11.64□□□□□ -0.55
CCT4-201ENST00000394440 BRI3O95415 125 aa11.64□□□□□ -0.55
CCT4-201ENST00000394440 IGHV4-59P01825 116 aa11.64□□□□□ -0.55
CCT4-201ENST00000394440 NBEAP1P0C6P0 100 aa11.64□□□□□ -0.55
CCT4-201ENST00000394440 FOLR2P14207 255 aa11.64□□□□□ -0.55
CCT4-201ENST00000394440 PPIFP30405 207 aaKnown RBP11.64□□□□□ -0.55
CCT4-201ENST00000394440 RPL35P42766 123 aaKnown RBP11.64□□□□□ -0.55
CCT4-201ENST00000394440 IER3P46695 156 aa11.64□□□□□ -0.55
CCT4-201ENST00000394440 BLCAPP62952 87 aa11.64□□□□□ -0.55
CCT4-201ENST00000394440 ELOBQ15370 118 aa11.64□□□□□ -0.55
CCT4-201ENST00000394440 ZNF600Q6ZNG1 722 aa11.64□□□□□ -0.55
CCT4-201ENST00000394440 ARL6IP6Q8N6S5 226 aa11.64□□□□□ -0.55
CCT4-201ENST00000394440 PGPEP1LA6NFU8 196 aa11.63□□□□□ -0.55
CCT4-201ENST00000394440 SCGB2A1O75556 95 aa11.63□□□□□ -0.55
CCT4-201ENST00000394440 C9orf152Q5JTZ5 239 aa11.63□□□□□ -0.55
CCT4-201ENST00000394440 ZNF329Q86UD4 541 aa11.63□□□□□ -0.55
CCT4-201ENST00000394440 WFDC11Q8NEX6 87 aa11.63□□□□□ -0.55
CCT4-201ENST00000394440 LINC00527Q9UJ94 153 aa11.63□□□□□ -0.55
CCT4-201ENST00000394440 PDZD2O15018 2839 aa11.63□□□□□ -0.55
CCT4-201ENST00000394440 CRYBA1P05813 215 aa11.63□□□□□ -0.55
CCT4-201ENST00000394440 CYB5R2Q6BCY4 276 aa11.63□□□□□ -0.55
CCT4-201ENST00000394440 Q6ZS46 218 aa11.63□□□□□ -0.55
CCT4-201ENST00000394440 LY96Q9Y6Y9 160 aa11.63□□□□□ -0.55
CCT4-201ENST00000394440 ITPR3Q14573 2671 aa11.63□□□□□ -0.55
CCT4-201ENST00000394440 ZNF469Q96JG9 3925 aaPredicted RBP11.63□□□□□ -0.55
CCT4-201ENST00000394440 MRPS12O15235 138 aaKnown RBP11.62□□□□□ -0.55
CCT4-201ENST00000394440 ATP6V0BQ99437 205 aa11.62□□□□□ -0.55
CCT4-201ENST00000394440 TCEAL7Q9BRU2 100 aa11.62□□□□□ -0.55
CCT4-201ENST00000394440 ZNF580Q9UK33 172 aa11.62□□□□□ -0.55
CCT4-201ENST00000394440 SNRPCP09234 159 aaKnown RBP11.62□□□□□ -0.55
CCT4-201ENST00000394440 GPR183P32249 361 aa11.62□□□□□ -0.55
CCT4-201ENST00000394440 OCC1Q8TAD7 63 aa11.62□□□□□ -0.55
CCT4-201ENST00000394440 MS4A10Q96PG2 267 aa11.62□□□□□ -0.55
CCT4-201ENST00000394440 GAR1Q9NY12 217 aaKnown RBP11.62□□□□□ -0.55
CCT4-201ENST00000394440 FAM223BA6NKX1 122 aa11.61□□□□□ -0.55
CCT4-201ENST00000394440 HIST1H1EP10412 219 aaKnown RBP11.61□□□□□ -0.55
CCT4-201ENST00000394440 CD99P14209 185 aa11.61□□□□□ -0.55
CCT4-201ENST00000394440 FAM223AQ8IWN6 122 aa11.61□□□□□ -0.55
CCT4-201ENST00000394440 EEF1AKMT3Q96AZ1 226 aa11.61□□□□□ -0.55
CCT4-201ENST00000394440 ANAPC16Q96DE5 110 aa11.61□□□□□ -0.55
CCT4-201ENST00000394440 ZNF586Q9NXT0 402 aa11.61□□□□□ -0.55
CCT4-201ENST00000394440 TRBV7-1A0A0A6YYK4 115 aa11.61□□□□□ -0.55
CCT4-201ENST00000394440 ZNF98A6NK75 572 aa11.61□□□□□ -0.55
CCT4-201ENST00000394440 H3BUA1 57 aa11.61□□□□□ -0.55
CCT4-201ENST00000394440 RAB5AP20339 215 aa11.61□□□□□ -0.55
CCT4-201ENST00000394440 OR5R1Q8NH85 324 aa11.61□□□□□ -0.55
CCT4-201ENST00000394440 SVIPQ8NHG7 77 aa11.61□□□□□ -0.55
CCT4-201ENST00000394440 BLNKQ8WV28 456 aa11.61□□□□□ -0.55
CCT4-201ENST00000394440 NOL4LQ96MY1 436 aaPredicted RBP11.61□□□□□ -0.55
CCT4-201ENST00000394440 PRDM13Q9H4Q3 707 aa11.61□□□□□ -0.55
CCT4-201ENST00000394440 AURKAIP1Q9NWT8 199 aaPredicted RBP11.61□□□□□ -0.55
CCT4-201ENST00000394440 HELTA6NFD8 242 aa11.6□□□□□ -0.55
CCT4-201ENST00000394440 AP4M1O00189 453 aa11.6□□□□□ -0.55
CCT4-201ENST00000394440 CLEC3BP05452 202 aa11.6□□□□□ -0.55
CCT4-201ENST00000394440 CXCL1P09341 107 aa11.6□□□□□ -0.55
CCT4-201ENST00000394440 IGLC2P0DOY2 106 aa11.6□□□□□ -0.55
CCT4-201ENST00000394440 RANP62826 216 aaKnown RBP11.6□□□□□ -0.55
CCT4-201ENST00000394440 BPIFA4PQ86YQ2 179 aa11.6□□□□□ -0.55
CCT4-201ENST00000394440 CIARTQ8N365 385 aaPredicted RBP11.6□□□□□ -0.55
CCT4-201ENST00000394440 IGF2BP2-AS1Q96M15 143 aa11.6□□□□□ -0.55
CCT4-201ENST00000394440 ZFAND3Q9H8U3 227 aa11.6□□□□□ -0.55
CCT4-201ENST00000394440 URGCP-MRPS24S4R325 110 aa11.6□□□□□ -0.55
CCT4-201ENST00000394440 K7EN84 100 aa11.6□□□□□ -0.55
CCT4-201ENST00000394440 CFHR3Q02985 330 aa11.6□□□□□ -0.55
CCT4-201ENST00000394440 CENPWQ5EE01 88 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms