RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 KLF17Q5JT82 389 aaPredicted RBP7.12□□□□□ -1.27
TDP1-202ENST00000393452 OR8I2Q8N0Y5 310 aa7.12□□□□□ -1.27
TDP1-202ENST00000393452 ZNF491Q8N8L2 437 aa7.12□□□□□ -1.27
TDP1-202ENST00000393452 MBD6Q96DN6 1003 aa7.12□□□□□ -1.27
TDP1-202ENST00000393452 ATG101Q9BSB4 218 aa7.12□□□□□ -1.27
TDP1-202ENST00000393452 SHANK2-AS3Q9BTD1 123 aa7.12□□□□□ -1.27
TDP1-202ENST00000393452 Q9H3A6 140 aa7.12□□□□□ -1.27
TDP1-202ENST00000393452 TRAV30A0A087WSZ9 112 aa7.12□□□□□ -1.27
TDP1-202ENST00000393452 WI2-2373I1.2A0A1W2PRP0 233 aa7.12□□□□□ -1.27
TDP1-202ENST00000393452 F8W735 103 aaPredicted RBP7.12□□□□□ -1.27
TDP1-202ENST00000393452 H3BRN7 92 aa7.12□□□□□ -1.27
TDP1-202ENST00000393452 IGHV4-39P01824 125 aa7.12□□□□□ -1.27
TDP1-202ENST00000393452 FAM106CPP0CH98 169 aa7.12□□□□□ -1.27
TDP1-202ENST00000393452 HIST1H1EP10412 219 aaKnown RBP7.12□□□□□ -1.27
TDP1-202ENST00000393452 EGR2P11161 476 aaPredicted RBP7.12□□□□□ -1.27
TDP1-202ENST00000393452 Q8N9W7 124 aa7.12□□□□□ -1.27
TDP1-202ENST00000393452 NHLRC2Q8NBF2 726 aa7.12□□□□□ -1.27
TDP1-202ENST00000393452 TMEM190Q8WZ59 177 aa7.12□□□□□ -1.27
TDP1-202ENST00000393452 MLST8Q9BVC4 326 aa7.12□□□□□ -1.27
TDP1-202ENST00000393452 GNB1LQ9BYB4 327 aa7.12□□□□□ -1.27
TDP1-202ENST00000393452 LPAR2Q9HBW0 351 aa7.12□□□□□ -1.27
TDP1-202ENST00000393452 ZNF586Q9NXT0 402 aa7.12□□□□□ -1.27
TDP1-202ENST00000393452 ABCA2Q9BZC7 2435 aa7.12□□□□□ -1.27
TDP1-202ENST00000393452 IGHV7-81A0A0B4J1V7 117 aa7.11□□□□□ -1.27
TDP1-202ENST00000393452 HLA-DRB1P01911 266 aa7.11□□□□□ -1.27
TDP1-202ENST00000393452 TCRAP04437 139 aa7.11□□□□□ -1.27
TDP1-202ENST00000393452 FRMD6-AS1P0C7T7 363 aa7.11□□□□□ -1.27
TDP1-202ENST00000393452 SAA4P35542 130 aa7.11□□□□□ -1.27
TDP1-202ENST00000393452 COX19Q49B96 90 aa7.11□□□□□ -1.27
TDP1-202ENST00000393452 CDPF1Q6NVV7 123 aa7.11□□□□□ -1.27
TDP1-202ENST00000393452 RNF125Q96EQ8 232 aa7.11□□□□□ -1.27
TDP1-202ENST00000393452 TMEM68Q96MH6 324 aa7.11□□□□□ -1.27
TDP1-202ENST00000393452 GPR82Q96P67 336 aa7.11□□□□□ -1.27
TDP1-202ENST00000393452 OTORQ9NRC9 128 aa7.11□□□□□ -1.27
TDP1-202ENST00000393452 C1RLQ9NZP8 487 aa7.11□□□□□ -1.27
TDP1-202ENST00000393452 ZNF705GA8MUZ8 300 aaPredicted RBP7.11□□□□□ -1.27
TDP1-202ENST00000393452 GATCO43716 136 aaKnown RBP7.11□□□□□ -1.27
TDP1-202ENST00000393452 MT-ND6P03923 174 aa7.11□□□□□ -1.27
TDP1-202ENST00000393452 IER3P46695 156 aa7.11□□□□□ -1.27
TDP1-202ENST00000393452 MFAP4P55083 255 aa7.11□□□□□ -1.27
TDP1-202ENST00000393452 UBE2G1P62253 170 aa7.11□□□□□ -1.27
TDP1-202ENST00000393452 RPL19P84098 196 aaKnown RBP7.11□□□□□ -1.27
TDP1-202ENST00000393452 KLK9Q2XQG4 91 aa7.11□□□□□ -1.27
TDP1-202ENST00000393452 GBGT1Q8N5D6 347 aa7.11□□□□□ -1.27
TDP1-202ENST00000393452 FAM168AQ92567 244 aa7.11□□□□□ -1.27
TDP1-202ENST00000393452 FMC1Q96HJ9 113 aa7.11□□□□□ -1.27
TDP1-202ENST00000393452 MRPL18Q9H0U6 180 aaKnown RBP7.11□□□□□ -1.27
TDP1-202ENST00000393452 KLK9Q9UKQ9 250 aa7.11□□□□□ -1.27
TDP1-202ENST00000393452 RNF24Q9Y225 148 aa7.11□□□□□ -1.27
TDP1-202ENST00000393452 IGSF10Q6WRI0 2623 aa7.1□□□□□ -1.27
TDP1-202ENST00000393452 TMEM238LA0A1B0GVL6 79 aa7.1□□□□□ -1.27
TDP1-202ENST00000393452 MRPS12O15235 138 aaKnown RBP7.1□□□□□ -1.27
TDP1-202ENST00000393452 GNG7O60262 68 aa7.1□□□□□ -1.27
TDP1-202ENST00000393452 LTAP01374 205 aa7.1□□□□□ -1.27
TDP1-202ENST00000393452 IGLC2P0DOY2 106 aa7.1□□□□□ -1.27
TDP1-202ENST00000393452 BRS3P32247 399 aa7.1□□□□□ -1.27
TDP1-202ENST00000393452 FAM120AOSQ5T036 256 aa7.1□□□□□ -1.27
TDP1-202ENST00000393452 WDR73Q6P4I2 378 aa7.1□□□□□ -1.27
TDP1-202ENST00000393452 NUDT10Q8NFP7 164 aa7.1□□□□□ -1.27
TDP1-202ENST00000393452 NUDT11Q96G61 164 aa7.1□□□□□ -1.27
TDP1-202ENST00000393452 THYN1Q9P016 225 aa7.1□□□□□ -1.27
TDP1-202ENST00000393452 IZUMO1RA6ND01 250 aa7.1□□□□□ -1.27
TDP1-202ENST00000393452 SNURFLB1AK76 121 aa7.1□□□□□ -1.27
TDP1-202ENST00000393452 H3BTX0 84 aa7.1□□□□□ -1.27
TDP1-202ENST00000393452 IL4P05112 153 aa7.1□□□□□ -1.27
TDP1-202ENST00000393452 JOSD1Q15040 202 aaPredicted RBP7.1□□□□□ -1.27
TDP1-202ENST00000393452 TMEM136Q6ZRR5 245 aa7.1□□□□□ -1.27
TDP1-202ENST00000393452 BPIFA4PQ86YQ2 179 aa7.1□□□□□ -1.27
TDP1-202ENST00000393452 PIP4P2Q8N4L2 257 aa7.1□□□□□ -1.27
TDP1-202ENST00000393452 TMEM18Q96B42 140 aa7.1□□□□□ -1.27
TDP1-202ENST00000393452 CHRDL1Q9BU40 450 aa7.1□□□□□ -1.27
TDP1-202ENST00000393452 C21orf62Q9NYP8 219 aa7.1□□□□□ -1.27
TDP1-202ENST00000393452 DOPEY1Q5JWR5 2465 aa7.1□□□□□ -1.27
TDP1-202ENST00000393452 TRBV19A0A075B6N1 114 aa7.09□□□□□ -1.27
TDP1-202ENST00000393452 NPFFO15130 113 aa7.09□□□□□ -1.27
TDP1-202ENST00000393452 NDUFB8O95169 186 aa7.09□□□□□ -1.27
TDP1-202ENST00000393452 CA1P00915 261 aaPredicted RBP7.09□□□□□ -1.27
TDP1-202ENST00000393452 FCGR2BP31994 310 aaPredicted RBP7.09□□□□□ -1.27
TDP1-202ENST00000393452 PAX8Q06710 450 aa7.09□□□□□ -1.27
TDP1-202ENST00000393452 USF2Q15853 346 aaPredicted RBP7.09□□□□□ -1.27
TDP1-202ENST00000393452 RASL11AQ6T310 242 aa7.09□□□□□ -1.27
TDP1-202ENST00000393452 LYPD1Q8N2G4 141 aa7.09□□□□□ -1.27
TDP1-202ENST00000393452 TMEM256Q8N2U0 113 aa7.09□□□□□ -1.27
TDP1-202ENST00000393452 GRAMD2BQ96HH9 432 aa7.09□□□□□ -1.27
TDP1-202ENST00000393452 HSPB9Q9BQS6 159 aa7.09□□□□□ -1.27
TDP1-202ENST00000393452 PRSS22Q9GZN4 317 aa7.09□□□□□ -1.27
TDP1-202ENST00000393452 PRDM13Q9H4Q3 707 aa7.09□□□□□ -1.27
TDP1-202ENST00000393452 SERTAD4Q9NUC0 356 aa7.09□□□□□ -1.27
TDP1-202ENST00000393452 TP53TG3Q9ULZ0 132 aa7.09□□□□□ -1.27
TDP1-202ENST00000393452 S4R3C0 116 aa7.09□□□□□ -1.27
TDP1-202ENST00000393452 TRBV6-1A0A0K0K1D8 114 aa7.09□□□□□ -1.28
TDP1-202ENST00000393452 CENPVL3A0A0U1RRI6 287 aa7.09□□□□□ -1.28
TDP1-202ENST00000393452 A0A1B0GUS0 222 aa7.09□□□□□ -1.28
TDP1-202ENST00000393452 IGLV2-11P01706 119 aa7.09□□□□□ -1.28
TDP1-202ENST00000393452 ESDP10768 282 aa7.09□□□□□ -1.28
TDP1-202ENST00000393452 TCL1AP56279 114 aa7.09□□□□□ -1.28
TDP1-202ENST00000393452 OR5R1Q8NH85 324 aa7.09□□□□□ -1.28
TDP1-202ENST00000393452 WIPF2Q8TF74 440 aaPredicted RBP7.09□□□□□ -1.28
TDP1-202ENST00000393452 NUPR1O60356 82 aa7.08□□□□□ -1.28
TDP1-202ENST00000393452 HLA-DQA1P01909 254 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms