RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 C10orf113Q5VZT2 155 aa7.77□□□□□ -1.16
COL6A3-204ENST00000392003 MMD2Q8IY49 270 aa7.77□□□□□ -1.16
COL6A3-204ENST00000392003 ATOH7Q8N100 152 aa7.77□□□□□ -1.16
COL6A3-204ENST00000392003 NPIPB3Q92617 1050 aa7.77□□□□□ -1.16
COL6A3-204ENST00000392003 A0A1W2PRE2 83 aa7.77□□□□□ -1.17
COL6A3-204ENST00000392003 GPR6P46095 362 aaPredicted RBP7.77□□□□□ -1.17
COL6A3-204ENST00000392003 RPL32P62910 135 aaKnown RBP7.77□□□□□ -1.17
COL6A3-204ENST00000392003 TCF24Q7RTU0 167 aa7.77□□□□□ -1.17
COL6A3-204ENST00000392003 ST6GALNAC6Q969X2 333 aa7.77□□□□□ -1.17
COL6A3-204ENST00000392003 SLC25A33Q9BSK2 321 aa7.77□□□□□ -1.17
COL6A3-204ENST00000392003 MED13LQ71F56 2210 aa7.77□□□□□ -1.17
COL6A3-204ENST00000392003 ACACBO00763 2458 aa7.77□□□□□ -1.17
COL6A3-204ENST00000392003 ARL3P36405 182 aa7.77□□□□□ -1.17
COL6A3-204ENST00000392003 RPL27AP46776 148 aaKnown RBP7.77□□□□□ -1.17
COL6A3-204ENST00000392003 PSG9Q00887 426 aa7.77□□□□□ -1.17
COL6A3-204ENST00000392003 CENPWQ5EE01 88 aa7.77□□□□□ -1.17
COL6A3-204ENST00000392003 OR5AU1Q8NGC0 362 aa7.77□□□□□ -1.17
COL6A3-204ENST00000392003 SIGMAR1Q99720 223 aa7.77□□□□□ -1.17
COL6A3-204ENST00000392003 INSIG2Q9Y5U4 225 aa7.77□□□□□ -1.17
COL6A3-204ENST00000392003 MALRD1Q5VYJ5 2156 aa7.76□□□□□ -1.17
COL6A3-204ENST00000392003 FCN3O75636 299 aa7.76□□□□□ -1.17
COL6A3-204ENST00000392003 ZNF137PP52743 207 aa7.76□□□□□ -1.17
COL6A3-204ENST00000392003 WT1-ASQ06250 92 aa7.76□□□□□ -1.17
COL6A3-204ENST00000392003 TNXAQ16473 311 aa7.76□□□□□ -1.17
COL6A3-204ENST00000392003 TEX45Q8NA69 505 aa7.76□□□□□ -1.17
COL6A3-204ENST00000392003 BLNKQ8WV28 456 aa7.76□□□□□ -1.17
COL6A3-204ENST00000392003 RAB1BQ9H0U4 201 aa7.76□□□□□ -1.17
COL6A3-204ENST00000392003 SLC17A3O00476 420 aa7.76□□□□□ -1.17
COL6A3-204ENST00000392003 MGST1P10620 155 aaKnown RBP7.76□□□□□ -1.17
COL6A3-204ENST00000392003 TSPOP30536 169 aa7.76□□□□□ -1.17
COL6A3-204ENST00000392003 CTRLP40313 264 aa7.76□□□□□ -1.17
COL6A3-204ENST00000392003 DLX6P56179 175 aa7.76□□□□□ -1.17
COL6A3-204ENST00000392003 PLP1P60201 277 aa7.76□□□□□ -1.17
COL6A3-204ENST00000392003 DPF1Q92782 380 aa7.76□□□□□ -1.17
COL6A3-204ENST00000392003 TIMD4Q96H15 378 aa7.76□□□□□ -1.17
COL6A3-204ENST00000392003 HSPB9Q9BQS6 159 aa7.76□□□□□ -1.17
COL6A3-204ENST00000392003 PAXXQ9BUH6 204 aa7.76□□□□□ -1.17
COL6A3-204ENST00000392003 CLEC7AQ9BXN2 247 aa7.76□□□□□ -1.17
COL6A3-204ENST00000392003 NRN1Q9NPD7 142 aa7.76□□□□□ -1.17
COL6A3-204ENST00000392003 AMMECR1Q9Y4X0 333 aaPredicted RBP7.76□□□□□ -1.17
COL6A3-204ENST00000392003 TCRBV4S1A1TA0A5B7 111 aa7.76□□□□□ -1.17
COL6A3-204ENST00000392003 GRIFINA4D1Z8 144 aa7.76□□□□□ -1.17
COL6A3-204ENST00000392003 REG1AP05451 166 aa7.76□□□□□ -1.17
COL6A3-204ENST00000392003 PSG3Q16557 428 aa7.76□□□□□ -1.17
COL6A3-204ENST00000392003 UQCR10Q9UDW1 63 aa7.76□□□□□ -1.17
COL6A3-204ENST00000392003 CACNA1AO00555 2505 aa7.75□□□□□ -1.17
COL6A3-204ENST00000392003 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.75□□□□□ -1.17
COL6A3-204ENST00000392003 IGLV2-23P01705 113 aa7.75□□□□□ -1.17
COL6A3-204ENST00000392003 IGHV3-48P01763 117 aa7.75□□□□□ -1.17
COL6A3-204ENST00000392003 COX7A1P24310 79 aa7.75□□□□□ -1.17
COL6A3-204ENST00000392003 RPL15P61313 204 aaKnown RBP7.75□□□□□ -1.17
COL6A3-204ENST00000392003 RPEQ96AT9 228 aa7.75□□□□□ -1.17
COL6A3-204ENST00000392003 SERTAD4Q9NUC0 356 aa7.75□□□□□ -1.17
COL6A3-204ENST00000392003 IGHV2-26A0A0B4J1V2 119 aa7.75□□□□□ -1.17
COL6A3-204ENST00000392003 E7EUB6 86 aa7.75□□□□□ -1.17
COL6A3-204ENST00000392003 K7EN84 100 aa7.75□□□□□ -1.17
COL6A3-204ENST00000392003 PLGLAQ15195 96 aa7.75□□□□□ -1.17
COL6A3-204ENST00000392003 RNF183Q96D59 192 aa7.75□□□□□ -1.17
COL6A3-204ENST00000392003 WNT10AQ9GZT5 417 aa7.75□□□□□ -1.17
COL6A3-204ENST00000392003 ZNF355PQ9NSJ1 428 aa7.75□□□□□ -1.17
COL6A3-204ENST00000392003 UFC1Q9Y3C8 167 aa7.75□□□□□ -1.17
COL6A3-204ENST00000392003 DCHS1Q96JQ0 3298 aa7.75□□□□□ -1.17
COL6A3-204ENST00000392003 A0A1W2PPI3 338 aa7.75□□□□□ -1.17
COL6A3-204ENST00000392003 IGLC7A0M8Q6 106 aa7.75□□□□□ -1.17
COL6A3-204ENST00000392003 SCGB1A1P11684 91 aa7.75□□□□□ -1.17
COL6A3-204ENST00000392003 ADORA2A-AS1P86434 159 aa7.75□□□□□ -1.17
COL6A3-204ENST00000392003 HCP5Q6MZN7 132 aa7.75□□□□□ -1.17
COL6A3-204ENST00000392003 OR8B3Q8NGG8 313 aa7.75□□□□□ -1.17
COL6A3-204ENST00000392003 DAZAP1Q96EP5 407 aaKnown RBP7.75□□□□□ -1.17
COL6A3-204ENST00000392003 OR8B2Q96RD0 313 aa7.75□□□□□ -1.17
COL6A3-204ENST00000392003 FNDC4Q9H6D8 234 aaPredicted RBP7.75□□□□□ -1.17
COL6A3-204ENST00000392003 TRAV5A0A0B4J249 113 aa7.74□□□□□ -1.17
COL6A3-204ENST00000392003 B5MCH6 92 aa7.74□□□□□ -1.17
COL6A3-204ENST00000392003 RPS20P60866 119 aaKnown RBP7.74□□□□□ -1.17
COL6A3-204ENST00000392003 NEU4Q8WWR8 484 aaPredicted RBP7.74□□□□□ -1.17
COL6A3-204ENST00000392003 ZNF503Q96F45 646 aa7.74□□□□□ -1.17
COL6A3-204ENST00000392003 PERPQ96FX8 193 aa7.74□□□□□ -1.17
COL6A3-204ENST00000392003 OSTCQ9NRP0 149 aa7.74□□□□□ -1.17
COL6A3-204ENST00000392003 TNFRSF19Q9NS68 423 aa7.74□□□□□ -1.17
COL6A3-204ENST00000392003 GGTLC3B5MD39 225 aa7.74□□□□□ -1.17
COL6A3-204ENST00000392003 FCN1O00602 326 aa7.74□□□□□ -1.17
COL6A3-204ENST00000392003 COL8A2P25067 703 aa7.74□□□□□ -1.17
COL6A3-204ENST00000392003 YPEL3P61236 119 aaPredicted RBP7.74□□□□□ -1.17
COL6A3-204ENST00000392003 TPSG1Q9NRR2 321 aa7.74□□□□□ -1.17
COL6A3-204ENST00000392003 ADGRG4Q8IZF6 3080 aa7.74□□□□□ -1.17
COL6A3-204ENST00000392003 ORM2P19652 201 aa7.73□□□□□ -1.17
COL6A3-204ENST00000392003 ZNF672Q499Z4 452 aaPredicted RBP7.73□□□□□ -1.17
COL6A3-204ENST00000392003 COX19Q49B96 90 aa7.73□□□□□ -1.17
COL6A3-204ENST00000392003 THAP8Q8NA92 274 aa7.73□□□□□ -1.17
COL6A3-204ENST00000392003 MRPL18Q9H0U6 180 aaKnown RBP7.73□□□□□ -1.17
COL6A3-204ENST00000392003 ONECUT1Q9UBC0 465 aa7.73□□□□□ -1.17
COL6A3-204ENST00000392003 CBLN1P23435 193 aa7.73□□□□□ -1.17
COL6A3-204ENST00000392003 ADMP35318 185 aa7.73□□□□□ -1.17
COL6A3-204ENST00000392003 IER3P46695 156 aa7.73□□□□□ -1.17
COL6A3-204ENST00000392003 KRTDAPP60985 99 aa7.73□□□□□ -1.17
COL6A3-204ENST00000392003 MPV17L2Q567V2 206 aa7.73□□□□□ -1.17
COL6A3-204ENST00000392003 FAM103A1Q9BTL3 118 aaKnown RBP7.73□□□□□ -1.17
COL6A3-204ENST00000392003 SLC25A2Q9BXI2 301 aa7.73□□□□□ -1.17
COL6A3-204ENST00000392003 TSSC4Q9Y5U2 329 aaPredicted RBP7.73□□□□□ -1.17
COL6A3-204ENST00000392003 HIVEP3Q5T1R4 2406 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms